data_4U42 # _model_server_result.job_id S6k-yHJ6iCm5YBgvbUInNQ _model_server_result.datetime_utc '2024-11-24 15:17:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u42 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4U42 # _exptl.entry_id 4U42 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4U42 _cell.length_a 79.448 _cell.length_b 83.672 _cell.length_c 95.459 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U42 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,C,D,E,H 2 1 B,F,G,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 78 A SER 77 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? metalc ? metalc2 A O ILE 83 A ILE 82 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc3 A OG1 THR 85 A THR 84 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc4 B O SER 78 B SER 77 1_555 G MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc5 B O HIS 80 B HIS 79 1_555 G MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc6 B O ILE 83 B ILE 82 1_555 G MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc7 B OG1 THR 85 B THR 84 1_555 G MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 263 n n O1 C6 MES sing 264 n n C2 C3 MES sing 265 n n C2 H21 MES sing 266 n n C2 H22 MES sing 267 n n C3 N4 MES sing 268 n n C3 H31 MES sing 269 n n C3 H32 MES sing 270 n n N4 C5 MES sing 271 n n N4 C7 MES sing 272 n n N4 HN4 MES sing 273 n n C5 C6 MES sing 274 n n C5 H51 MES sing 275 n n C5 H52 MES sing 276 n n C6 H61 MES sing 277 n n C6 H62 MES sing 278 n n C7 C8 MES sing 279 n n C7 H71 MES sing 280 n n C7 H72 MES sing 281 n n C8 S MES sing 282 n n C8 H81 MES sing 283 n n C8 H82 MES sing 284 n n S O1S MES doub 285 n n S O2S MES doub 286 n n S O3S MES sing 287 n n # _atom_sites.entry_id 4U42 _atom_sites.fract_transf_matrix[1][1] 0.012587 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011951 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MES A 1 401 1 MES MES . D 3 3C8 A 1 402 1 3C8 DRG . E 4 MG A 1 403 1 MG MG . F 3 3C8 B 1 401 1 3C8 DRG . G 4 MG B 1 402 1 MG MG . H 5 HOH A 1 501 4 HOH HOH . H 5 HOH A 2 502 39 HOH HOH . H 5 HOH A 3 503 28 HOH HOH . H 5 HOH A 4 504 41 HOH HOH . H 5 HOH A 5 505 1 HOH HOH . H 5 HOH A 6 506 6 HOH HOH . H 5 HOH A 7 507 8 HOH HOH . H 5 HOH A 8 508 10 HOH HOH . H 5 HOH A 9 509 12 HOH HOH . H 5 HOH A 10 510 14 HOH HOH . H 5 HOH A 11 511 15 HOH HOH . H 5 HOH A 12 512 17 HOH HOH . H 5 HOH A 13 513 19 HOH HOH . H 5 HOH A 14 514 21 HOH HOH . H 5 HOH A 15 515 22 HOH HOH . H 5 HOH A 16 516 24 HOH HOH . H 5 HOH A 17 517 29 HOH HOH . H 5 HOH A 18 518 32 HOH HOH . H 5 HOH A 19 519 34 HOH HOH . H 5 HOH A 20 520 36 HOH HOH . H 5 HOH A 21 521 37 HOH HOH . H 5 HOH A 22 522 40 HOH HOH . H 5 HOH A 23 523 42 HOH HOH . H 5 HOH A 24 524 46 HOH HOH . H 5 HOH A 25 525 52 HOH HOH . I 5 HOH B 1 501 16 HOH HOH . I 5 HOH B 2 502 27 HOH HOH . I 5 HOH B 3 503 48 HOH HOH . I 5 HOH B 4 504 44 HOH HOH . I 5 HOH B 5 505 26 HOH HOH . I 5 HOH B 6 506 47 HOH HOH . I 5 HOH B 7 507 49 HOH HOH . I 5 HOH B 8 508 9 HOH HOH . I 5 HOH B 9 509 3 HOH HOH . I 5 HOH B 10 510 5 HOH HOH . I 5 HOH B 11 511 7 HOH HOH . I 5 HOH B 12 512 11 HOH HOH . I 5 HOH B 13 513 18 HOH HOH . I 5 HOH B 14 514 20 HOH HOH . I 5 HOH B 15 515 23 HOH HOH . I 5 HOH B 16 516 30 HOH HOH . I 5 HOH B 17 517 31 HOH HOH . I 5 HOH B 18 518 33 HOH HOH . I 5 HOH B 19 519 35 HOH HOH . I 5 HOH B 20 520 38 HOH HOH . I 5 HOH B 21 521 45 HOH HOH . I 5 HOH B 22 522 51 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . C 2 -5.55 32.84 -13.275 1 61.62 ? O1 MES 401 A 1 HETATM 2 C C2 MES . . . C 2 -5.244 32.638 -14.64 1 60.94 ? C2 MES 401 A 1 HETATM 3 C C3 MES . . . C 2 -4.445 31.401 -14.86 1 58.84 ? C3 MES 401 A 1 HETATM 4 N N4 MES . . . C 2 -3.371 31.26 -13.942 1 65.41 ? N4 MES 401 A 1 HETATM 5 C C5 MES . . . C 2 -3.613 31.657 -12.606 1 61.49 ? C5 MES 401 A 1 HETATM 6 C C6 MES . . . C 2 -4.398 32.908 -12.491 1 59.72 ? C6 MES 401 A 1 HETATM 7 C C7 MES . . . C 2 -2.602 30.031 -14.017 1 60.26 ? C7 MES 401 A 1 HETATM 8 C C8 MES . . . C 2 -1.056 30.192 -13.907 1 59.52 ? C8 MES 401 A 1 HETATM 9 S S MES . . . C 2 -0.212 28.676 -13.968 1 71.02 ? S MES 401 A 1 HETATM 10 O O1S MES . . . C 2 -1.05 27.675 -13.397 1 61.6 ? O1S MES 401 A 1 HETATM 11 O O2S MES . . . C 2 0.067 28.347 -15.41 1 70.36 ? O2S MES 401 A 1 HETATM 12 O O3S MES . . . C 2 1.072 28.816 -13.21 1 66.57 ? O3S MES 401 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 12 #