data_4U5C
#
_model_server_result.job_id            A5RSomELMhAZ5CkoNAginA 
_model_server_result.datetime_utc      '2025-04-25 13:52:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4u5c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":902}' 
#
_entry.id    4U5C 
#
_exptl.entry_id    4U5C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              217.155 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-PROPIONIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4U5C 
_cell.length_a            163.07 
_cell.length_b            364.78 
_cell.length_c            109.75 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4U5C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 J N N 
? 4 M N N 
? 4 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 54 A CYS 59 1_555 A SG CYS 306 A CYS 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 708 A CYS 718 1_555 A SG CYS 763 A CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 B SG CYS 54 B CYS 59 1_555 B SG CYS 306 B CYS 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 B SG CYS 708 B CYS 718 1_555 B SG CYS 763 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf5 C SG CYS 54 C CYS 59 1_555 C SG CYS 306 C CYS 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 C SG CYS 708 C CYS 718 1_555 C SG CYS 763 C CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf7 D SG CYS 54 D CYS 59 1_555 D SG CYS 306 D CYS 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf8 D SG CYS 708 D CYS 718 1_555 D SG CYS 763 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf9 E SG CYS 10 E CYS 6 1_555 F SG CYS 10 F CYS 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf10 E SG CYS 11 E CYS 7 1_555 F SG CYS 11 F CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf11 E SG CYS 16 E CYS 12 1_555 E SG CYS 47 E CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf12 E SG CYS 17 E CYS 13 1_555 E SG CYS 56 E CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf13 E SG CYS 24 E CYS 20 1_555 E SG CYS 39 E CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf14 E SG CYS 57 E CYS 53 1_555 E SG CYS 85 E CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf15 E SG CYS 63 E CYS 59 1_555 E SG CYS 80 E CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf16 E SG CYS 89 E CYS 85 1_555 F SG CYS 89 F CYS 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf17 F SG CYS 16 F CYS 12 1_555 F SG CYS 47 F CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf18 F SG CYS 17 F CYS 13 1_555 F SG CYS 56 F CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf19 F SG CYS 24 F CYS 20 1_555 F SG CYS 39 F CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf20 F SG CYS 57 F CYS 53 1_555 F SG CYS 85 F CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf21 F SG CYS 63 F CYS 59 1_555 F SG CYS 80 F CYS 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 A ND2 ASN 346 A ASN 351 1_555 G C1 NAG . A NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.406 ? 
covale ? covale2 B ND2 ASN 346 B ASN 351 1_555 I C1 NAG . B NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? 
covale ? covale3 C ND2 ASN 346 C ASN 351 1_555 L C1 NAG . C NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale4 D ND2 ASN 346 D ASN 351 1_555 N C1 NAG . D NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
#
_chem_comp.formula           'C7 H8 F N3 O4' 
_chem_comp.formula_weight    217.155 
_chem_comp.id                FWD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-PROPIONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     FLUORO-WILLARDIINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FWD sing 83 n n 
N1 C6 FWD sing 84 n n 
N1 C7 FWD sing 85 n n 
C2 O2 FWD doub 86 n n 
C2 N3 FWD sing 87 n n 
N3 C4 FWD sing 88 n n 
N3 H3 FWD sing 89 n n 
C4 O4 FWD doub 90 n n 
C4 C5 FWD sing 91 n n 
C5 F5 FWD sing 92 n n 
C5 C6 FWD doub 93 n n 
C6 H6 FWD sing 94 n n 
C7 C8 FWD sing 95 n n 
C7 H71 FWD sing 96 n n 
C7 H72 FWD sing 97 n n 
C8 N8 FWD sing 98 n n 
C8 C9 FWD sing 99 n n 
C8 H8 FWD sing 100 n n 
N8 H81 FWD sing 101 n n 
N8 H82 FWD sing 102 n n 
C9 O91 FWD doub 103 n n 
C9 O92 FWD sing 104 n n 
O92 H92O FWD sing 105 n n 
#
_atom_sites.entry_id                     4U5C 
_atom_sites.fract_transf_matrix[1][1]    0.006132 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.002741 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009112 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 NAG A 1 901 1399 NAG NAG . 
H 4 FWD A 1 902 999 FWD FWD . 
I 3 NAG B 1 901 1399 NAG NAG . 
J 4 FWD B 1 902 999 FWD FWD . 
K 5 FWF B 1 903 1 FWF FWF . 
L 3 NAG C 1 901 1399 NAG NAG . 
M 4 FWD C 1 902 999 FWD FWD . 
N 3 NAG D 1 901 1399 NAG NAG . 
O 4 FWD D 1 902 999 FWD FWD . 
P 5 FWF D 1 903 1 FWF FWF . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FWD . . . M 4 -38.787 -25.585 46.623 1 97.9 ? N1 FWD 902 C 1 
HETATM 2 C C2 FWD . . . M 4 -39.432 -26 45.435 1 148.31 ? C2 FWD 902 C 1 
HETATM 3 O O2 FWD . . . M 4 -39.67 -25.161 44.54 1 180.05 ? O2 FWD 902 C 1 
HETATM 4 N N3 FWD . . . M 4 -39.799 -27.288 45.247 1 158.27 ? N3 FWD 902 C 1 
HETATM 5 C C4 FWD . . . M 4 -39.555 -28.212 46.198 1 143.67 ? C4 FWD 902 C 1 
HETATM 6 O O4 FWD . . . M 4 -39.89 -29.404 46.032 1 162.63 ? O4 FWD 902 C 1 
HETATM 7 C C5 FWD . . . M 4 -38.88 -27.792 47.448 1 110.89 ? C5 FWD 902 C 1 
HETATM 8 F F5 FWD . . . M 4 -38.622 -28.688 48.415 1 138.58 ? F5 FWD 902 C 1 
HETATM 9 C C6 FWD . . . M 4 -38.522 -26.46 47.599 1 74.18 ? C6 FWD 902 C 1 
HETATM 10 C C7 FWD . . . M 4 -38.407 -24.178 46.79 1 106.21 ? C7 FWD 902 C 1 
HETATM 11 C C8 FWD . . . M 4 -37.005 -23.92 46.244 1 107.59 ? C8 FWD 902 C 1 
HETATM 12 N N8 FWD . . . M 4 -36.014 -24.577 47.076 1 76.9 ? N8 FWD 902 C 1 
HETATM 13 C C9 FWD . . . M 4 -36.732 -22.444 46.206 1 104.13 ? C9 FWD 902 C 1 
HETATM 14 O O91 FWD . . . M 4 -37.684 -21.67 45.965 1 93.71 ? O91 FWD 902 C 1 
HETATM 15 O O92 FWD . . . M 4 -35.564 -22.044 46.407 1 87.71 ? O92 FWD 902 C 1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           15 
#