data_4U5J
#
_model_server_result.job_id            JVI7uXmED7FUc_1d2xOpPQ 
_model_server_result.datetime_utc      '2024-10-11 00:27:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4u5j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    4U5J 
#
_exptl.entry_id    4U5J 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              306.365 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (3R)-3-cyclopentyl-3-[4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         79.27 
_cell.angle_beta          89.27 
_cell.angle_gamma         90.29 
_cell.entry_id            4U5J 
_cell.length_a            42.107 
_cell.length_b            63.228 
_cell.length_c            73.989 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4U5J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C17 H18 N6' 
_chem_comp.formula_weight    306.365 
_chem_comp.id                RXT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (3R)-3-cyclopentyl-3-[4-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-1H-pyrazol-1-yl]propanenitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Ruxolitinib 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAE NAM RXT doub 277 n y 
CAE NAP RXT sing 278 n y 
NAM CAR RXT sing 279 n y 
NAP CAT RXT doub 280 n y 
CAF CAQ RXT sing 281 n y 
CAF NAO RXT doub 282 n y 
CAR CAQ RXT sing 283 n n 
CAR CAS RXT doub 284 n y 
CAQ CAG RXT doub 285 n y 
NAO NAW RXT sing 286 n y 
CAT CAS RXT sing 287 n y 
CAT NAN RXT sing 288 n y 
CAS CAD RXT sing 289 n y 
NAN CAC RXT sing 290 n y 
NAW CAG RXT sing 291 n y 
NAW CAV RXT sing 292 n n 
CAJ CAB RXT sing 293 n n 
CAJ CAV RXT sing 294 n n 
CAD CAC RXT doub 295 n y 
CAB NAA RXT trip 296 n n 
CAV CAU RXT sing 297 n n 
CAL CAI RXT sing 298 n n 
CAL CAU RXT sing 299 n n 
CAI CAH RXT sing 300 n n 
CAU CAK RXT sing 301 n n 
CAH CAK RXT sing 302 n n 
CAK H1 RXT sing 303 n n 
CAK H2 RXT sing 304 n n 
CAH H3 RXT sing 305 n n 
CAH H4 RXT sing 306 n n 
CAI H5 RXT sing 307 n n 
CAI H6 RXT sing 308 n n 
CAL H7 RXT sing 309 n n 
CAL H8 RXT sing 310 n n 
CAU H9 RXT sing 311 n n 
CAV H10 RXT sing 312 n n 
CAJ H11 RXT sing 313 n n 
CAJ H12 RXT sing 314 n n 
CAG H18 RXT sing 315 n n 
CAF H19 RXT sing 316 n n 
CAE H20 RXT sing 317 n n 
CAD H21 RXT sing 318 n n 
CAC H22 RXT sing 319 n n 
NAN H23 RXT sing 320 n n 
#
_atom_sites.entry_id                     4U5J 
_atom_sites.fract_transf_matrix[1][1]    0.023749 
_atom_sites.fract_transf_matrix[1][2]    0.000119 
_atom_sites.fract_transf_matrix[1][3]    -0.000329 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015816 
_atom_sites.fract_transf_matrix[2][3]    -0.003 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013758 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 RXT A 1 601 1 RXT DRG . 
D 2 RXT B 1 601 2 RXT DRG . 
E 3 HOH A 1 701 26 HOH HOH . 
E 3 HOH A 2 702 133 HOH HOH . 
E 3 HOH A 3 703 129 HOH HOH . 
E 3 HOH A 4 704 174 HOH HOH . 
E 3 HOH A 5 705 68 HOH HOH . 
E 3 HOH A 6 706 4 HOH HOH . 
E 3 HOH A 7 707 10 HOH HOH . 
E 3 HOH A 8 708 106 HOH HOH . 
E 3 HOH A 9 709 158 HOH HOH . 
E 3 HOH A 10 710 176 HOH HOH . 
E 3 HOH A 11 711 39 HOH HOH . 
E 3 HOH A 12 712 146 HOH HOH . 
E 3 HOH A 13 713 154 HOH HOH . 
E 3 HOH A 14 714 93 HOH HOH . 
E 3 HOH A 15 715 179 HOH HOH . 
E 3 HOH A 16 716 152 HOH HOH . 
E 3 HOH A 17 717 167 HOH HOH . 
E 3 HOH A 18 718 132 HOH HOH . 
E 3 HOH A 19 719 147 HOH HOH . 
E 3 HOH A 20 720 153 HOH HOH . 
E 3 HOH A 21 721 96 HOH HOH . 
E 3 HOH A 22 722 67 HOH HOH . 
E 3 HOH A 23 723 3 HOH HOH . 
E 3 HOH A 24 724 6 HOH HOH . 
E 3 HOH A 25 725 7 HOH HOH . 
E 3 HOH A 26 726 8 HOH HOH . 
E 3 HOH A 27 727 9 HOH HOH . 
E 3 HOH A 28 728 11 HOH HOH . 
E 3 HOH A 29 729 12 HOH HOH . 
E 3 HOH A 30 730 13 HOH HOH . 
E 3 HOH A 31 731 14 HOH HOH . 
E 3 HOH A 32 732 15 HOH HOH . 
E 3 HOH A 33 733 17 HOH HOH . 
E 3 HOH A 34 734 21 HOH HOH . 
E 3 HOH A 35 735 24 HOH HOH . 
E 3 HOH A 36 736 31 HOH HOH . 
E 3 HOH A 37 737 32 HOH HOH . 
E 3 HOH A 38 738 33 HOH HOH . 
E 3 HOH A 39 739 34 HOH HOH . 
E 3 HOH A 40 740 35 HOH HOH . 
E 3 HOH A 41 741 36 HOH HOH . 
E 3 HOH A 42 742 40 HOH HOH . 
E 3 HOH A 43 743 46 HOH HOH . 
E 3 HOH A 44 744 49 HOH HOH . 
E 3 HOH A 45 745 50 HOH HOH . 
E 3 HOH A 46 746 54 HOH HOH . 
E 3 HOH A 47 747 55 HOH HOH . 
E 3 HOH A 48 748 57 HOH HOH . 
E 3 HOH A 49 749 62 HOH HOH . 
E 3 HOH A 50 750 63 HOH HOH . 
E 3 HOH A 51 751 64 HOH HOH . 
E 3 HOH A 52 752 66 HOH HOH . 
E 3 HOH A 53 753 69 HOH HOH . 
E 3 HOH A 54 754 72 HOH HOH . 
E 3 HOH A 55 755 73 HOH HOH . 
E 3 HOH A 56 756 74 HOH HOH . 
E 3 HOH A 57 757 75 HOH HOH . 
E 3 HOH A 58 758 77 HOH HOH . 
E 3 HOH A 59 759 83 HOH HOH . 
E 3 HOH A 60 760 87 HOH HOH . 
E 3 HOH A 61 761 91 HOH HOH . 
E 3 HOH A 62 762 92 HOH HOH . 
E 3 HOH A 63 763 99 HOH HOH . 
E 3 HOH A 64 764 101 HOH HOH . 
E 3 HOH A 65 765 102 HOH HOH . 
E 3 HOH A 66 766 105 HOH HOH . 
E 3 HOH A 67 767 107 HOH HOH . 
E 3 HOH A 68 768 108 HOH HOH . 
E 3 HOH A 69 769 109 HOH HOH . 
E 3 HOH A 70 770 112 HOH HOH . 
E 3 HOH A 71 771 115 HOH HOH . 
E 3 HOH A 72 772 120 HOH HOH . 
E 3 HOH A 73 773 121 HOH HOH . 
E 3 HOH A 74 774 123 HOH HOH . 
E 3 HOH A 75 775 124 HOH HOH . 
E 3 HOH A 76 776 127 HOH HOH . 
E 3 HOH A 77 777 134 HOH HOH . 
E 3 HOH A 78 778 139 HOH HOH . 
E 3 HOH A 79 779 140 HOH HOH . 
E 3 HOH A 80 780 141 HOH HOH . 
E 3 HOH A 81 781 142 HOH HOH . 
E 3 HOH A 82 782 144 HOH HOH . 
E 3 HOH A 83 783 149 HOH HOH . 
E 3 HOH A 84 784 155 HOH HOH . 
E 3 HOH A 85 785 157 HOH HOH . 
E 3 HOH A 86 786 161 HOH HOH . 
E 3 HOH A 87 787 162 HOH HOH . 
E 3 HOH A 88 788 163 HOH HOH . 
E 3 HOH A 89 789 165 HOH HOH . 
E 3 HOH A 90 790 166 HOH HOH . 
E 3 HOH A 91 791 169 HOH HOH . 
E 3 HOH A 92 792 170 HOH HOH . 
E 3 HOH A 93 793 173 HOH HOH . 
E 3 HOH A 94 794 177 HOH HOH . 
F 3 HOH B 1 701 2 HOH HOH . 
F 3 HOH B 2 702 110 HOH HOH . 
F 3 HOH B 3 703 95 HOH HOH . 
F 3 HOH B 4 704 43 HOH HOH . 
F 3 HOH B 5 705 114 HOH HOH . 
F 3 HOH B 6 706 78 HOH HOH . 
F 3 HOH B 7 707 70 HOH HOH . 
F 3 HOH B 8 708 45 HOH HOH . 
F 3 HOH B 9 709 126 HOH HOH . 
F 3 HOH B 10 710 18 HOH HOH . 
F 3 HOH B 11 711 80 HOH HOH . 
F 3 HOH B 12 712 125 HOH HOH . 
F 3 HOH B 13 713 37 HOH HOH . 
F 3 HOH B 14 714 1 HOH HOH . 
F 3 HOH B 15 715 5 HOH HOH . 
F 3 HOH B 16 716 16 HOH HOH . 
F 3 HOH B 17 717 19 HOH HOH . 
F 3 HOH B 18 718 20 HOH HOH . 
F 3 HOH B 19 719 22 HOH HOH . 
F 3 HOH B 20 720 23 HOH HOH . 
F 3 HOH B 21 721 25 HOH HOH . 
F 3 HOH B 22 722 27 HOH HOH . 
F 3 HOH B 23 723 28 HOH HOH . 
F 3 HOH B 24 724 29 HOH HOH . 
F 3 HOH B 25 725 30 HOH HOH . 
F 3 HOH B 26 726 38 HOH HOH . 
F 3 HOH B 27 727 41 HOH HOH . 
F 3 HOH B 28 728 42 HOH HOH . 
F 3 HOH B 29 729 44 HOH HOH . 
F 3 HOH B 30 730 47 HOH HOH . 
F 3 HOH B 31 731 48 HOH HOH . 
F 3 HOH B 32 732 51 HOH HOH . 
F 3 HOH B 33 733 52 HOH HOH . 
F 3 HOH B 34 734 53 HOH HOH . 
F 3 HOH B 35 735 56 HOH HOH . 
F 3 HOH B 36 736 58 HOH HOH . 
F 3 HOH B 37 737 59 HOH HOH . 
F 3 HOH B 38 738 60 HOH HOH . 
F 3 HOH B 39 739 61 HOH HOH . 
F 3 HOH B 40 740 65 HOH HOH . 
F 3 HOH B 41 741 71 HOH HOH . 
F 3 HOH B 42 742 76 HOH HOH . 
F 3 HOH B 43 743 79 HOH HOH . 
F 3 HOH B 44 744 81 HOH HOH . 
F 3 HOH B 45 745 82 HOH HOH . 
F 3 HOH B 46 746 84 HOH HOH . 
F 3 HOH B 47 747 85 HOH HOH . 
F 3 HOH B 48 748 86 HOH HOH . 
F 3 HOH B 49 749 88 HOH HOH . 
F 3 HOH B 50 750 89 HOH HOH . 
F 3 HOH B 51 751 90 HOH HOH . 
F 3 HOH B 52 752 94 HOH HOH . 
F 3 HOH B 53 753 97 HOH HOH . 
F 3 HOH B 54 754 98 HOH HOH . 
F 3 HOH B 55 755 100 HOH HOH . 
F 3 HOH B 56 756 103 HOH HOH . 
F 3 HOH B 57 757 104 HOH HOH . 
F 3 HOH B 58 758 111 HOH HOH . 
F 3 HOH B 59 759 113 HOH HOH . 
F 3 HOH B 60 760 116 HOH HOH . 
F 3 HOH B 61 761 117 HOH HOH . 
F 3 HOH B 62 762 118 HOH HOH . 
F 3 HOH B 63 763 119 HOH HOH . 
F 3 HOH B 64 764 122 HOH HOH . 
F 3 HOH B 65 765 128 HOH HOH . 
F 3 HOH B 66 766 130 HOH HOH . 
F 3 HOH B 67 767 131 HOH HOH . 
F 3 HOH B 68 768 135 HOH HOH . 
F 3 HOH B 69 769 136 HOH HOH . 
F 3 HOH B 70 770 137 HOH HOH . 
F 3 HOH B 71 771 138 HOH HOH . 
F 3 HOH B 72 772 143 HOH HOH . 
F 3 HOH B 73 773 145 HOH HOH . 
F 3 HOH B 74 774 148 HOH HOH . 
F 3 HOH B 75 775 150 HOH HOH . 
F 3 HOH B 76 776 151 HOH HOH . 
F 3 HOH B 77 777 156 HOH HOH . 
F 3 HOH B 78 778 159 HOH HOH . 
F 3 HOH B 79 779 160 HOH HOH . 
F 3 HOH B 80 780 164 HOH HOH . 
F 3 HOH B 81 781 168 HOH HOH . 
F 3 HOH B 82 782 171 HOH HOH . 
F 3 HOH B 83 783 172 HOH HOH . 
F 3 HOH B 84 784 175 HOH HOH . 
F 3 HOH B 85 785 178 HOH HOH . 
F 3 HOH B 86 786 180 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAK RXT . . . D 2 -4.931 57.595 39.009 1 65.28 ? CAK RXT 601 B 1 
HETATM 2 C CAH RXT . . . D 2 -5.851 58.169 37.831 1 60.63 ? CAH RXT 601 B 1 
HETATM 3 C CAI RXT . . . D 2 -6.278 59.408 38.228 1 54.51 ? CAI RXT 601 B 1 
HETATM 4 C CAL RXT . . . D 2 -5.287 59.902 39.464 1 66.08 ? CAL RXT 601 B 1 
HETATM 5 C CAU RXT . . . D 2 -4.819 58.766 40.086 1 70.25 ? CAU RXT 601 B 1 
HETATM 6 C CAV RXT . . . D 2 -5.577 58.441 41.405 1 69.54 ? CAV RXT 601 B 1 
HETATM 7 C CAJ RXT . . . D 2 -5.275 59.525 42.44 1 71.67 ? CAJ RXT 601 B 1 
HETATM 8 C CAB RXT . . . D 2 -4.287 59.056 43.516 1 67.68 ? CAB RXT 601 B 1 
HETATM 9 N NAA RXT . . . D 2 -3.597 57.901 43.065 1 71.13 ? NAA RXT 601 B 1 
HETATM 10 N NAW RXT . . . D 2 -6.983 58.331 41.223 1 59.4 ? NAW RXT 601 B 1 
HETATM 11 C CAG RXT . . . D 2 -7.88 59.212 41.677 1 53.86 ? CAG RXT 601 B 1 
HETATM 12 N NAO RXT . . . D 2 -7.58 57.353 40.6 1 58.11 ? NAO RXT 601 B 1 
HETATM 13 C CAF RXT . . . D 2 -8.903 57.531 40.592 1 48.58 ? CAF RXT 601 B 1 
HETATM 14 C CAQ RXT . . . D 2 -9.171 58.731 41.296 1 46.23 ? CAQ RXT 601 B 1 
HETATM 15 C CAR RXT . . . D 2 -10.505 59.369 41.527 1 40.03 ? CAR RXT 601 B 1 
HETATM 16 N NAM RXT . . . D 2 -10.644 60.48 42.282 1 40.37 ? NAM RXT 601 B 1 
HETATM 17 C CAE RXT . . . D 2 -11.832 61.053 42.453 1 35.19 ? CAE RXT 601 B 1 
HETATM 18 N NAP RXT . . . D 2 -12.93 60.567 41.88 1 32.21 ? NAP RXT 601 B 1 
HETATM 19 C CAT RXT . . . D 2 -12.879 59.44 41.079 1 34.69 ? CAT RXT 601 B 1 
HETATM 20 C CAS RXT . . . D 2 -11.667 58.81 40.868 1 37.42 ? CAS RXT 601 B 1 
HETATM 21 C CAD RXT . . . D 2 -11.932 57.685 39.988 1 34.6 ? CAD RXT 601 B 1 
HETATM 22 C CAC RXT . . . D 2 -13.302 57.73 39.734 1 34.96 ? CAC RXT 601 B 1 
HETATM 23 N NAN RXT . . . D 2 -13.834 58.758 40.385 1 37.34 ? NAN RXT 601 B 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           23 
#