data_4U6A
#
_model_server_result.job_id            svHTKfiN86Una1-KBWU9Bg 
_model_server_result.datetime_utc      '2025-01-25 11:16:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4u6a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1402}' 
#
_entry.id    4U6A 
#
_exptl.entry_id    4U6A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              375.507 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-(4-{[4-(dimethylamino)piperidin-1-yl]methyl}phenyl)-5-methylisoquinolin-1(2H)-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4U6A 
_cell.length_a            81.38 
_cell.length_b            80.98 
_cell.length_c            84.02 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4U6A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        24 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    Monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 167 A CYS 1234 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc2 A ND1 HIS 170 A HIS 1237 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
metalc ? metalc3 A SG CYS 175 A CYS 1242 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc4 A SG CYS 178 A CYS 1245 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? 
#
_chem_comp.formula           'C24 H29 N3 O' 
_chem_comp.formula_weight    375.507 
_chem_comp.id                3DN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-(4-{[4-(dimethylamino)piperidin-1-yl]methyl}phenyl)-5-methylisoquinolin-1(2H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 N3 3DN sing 1 n n 
C15 C14 3DN sing 2 n n 
N3 C23 3DN sing 3 n n 
N3 C11 3DN sing 4 n n 
C23 C22 3DN sing 5 n n 
C23 C9 3DN sing 6 n n 
C10 C22 3DN sing 7 n n 
C10 N1 3DN sing 8 n n 
C7 C19 3DN doub 9 n y 
C7 C20 3DN sing 10 n y 
C14 C16 3DN doub 11 n y 
C14 C1 3DN sing 12 n y 
C19 C18 3DN sing 13 n y 
C16 C17 3DN sing 14 n y 
C24 C9 3DN sing 15 n n 
C24 N1 3DN sing 16 n n 
C5 C1 3DN sing 17 n n 
C5 C4 3DN doub 18 n n 
C8 N1 3DN sing 19 n n 
C8 C20 3DN sing 20 n n 
C1 C2 3DN doub 21 n y 
C20 C21 3DN doub 22 n y 
C18 C4 3DN sing 23 n n 
C18 C6 3DN doub 24 n y 
C17 C13 3DN doub 25 n y 
C4 N2 3DN sing 26 n n 
C2 C13 3DN sing 27 n y 
C2 C3 3DN sing 28 n n 
C21 C6 3DN sing 29 n y 
N2 C3 3DN sing 30 n n 
C3 O1 3DN doub 31 n n 
C5 H2 3DN sing 32 n n 
C6 H4 3DN sing 33 n n 
C7 H5 3DN sing 34 n n 
C8 H6 3DN sing 35 n n 
C8 H7 3DN sing 36 n n 
C9 H8 3DN sing 37 n n 
C9 H9 3DN sing 38 n n 
C10 H10 3DN sing 39 n n 
C10 H11 3DN sing 40 n n 
C11 H12 3DN sing 41 n n 
C11 H13 3DN sing 42 n n 
C11 H14 3DN sing 43 n n 
C12 H15 3DN sing 44 n n 
C12 H16 3DN sing 45 n n 
C12 H17 3DN sing 46 n n 
C13 H18 3DN sing 47 n n 
C15 H19 3DN sing 48 n n 
C15 H20 3DN sing 49 n n 
C15 H21 3DN sing 50 n n 
C16 H22 3DN sing 51 n n 
C17 H23 3DN sing 52 n n 
C19 H24 3DN sing 53 n n 
C21 H25 3DN sing 54 n n 
C22 H26 3DN sing 55 n n 
C22 H27 3DN sing 56 n n 
C23 H28 3DN sing 57 n n 
C24 H30 3DN sing 58 n n 
C24 H31 3DN sing 59 n n 
N2 H1 3DN sing 60 n n 
#
_atom_sites.entry_id                     4U6A 
_atom_sites.fract_transf_matrix[1][1]    0.012288 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012349 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011902 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 1401 2000 ZN ZN . 
C 3 3DN A 1 1402 3000 3DN 3DN . 
D 4 GOL A 1 1403 1 GOL GOL . 
E 4 GOL A 1 1404 2 GOL GOL . 
F 4 GOL A 1 1405 3 GOL GOL . 
G 5 EDO A 1 1406 1 EDO EDO . 
H 4 GOL A 1 1407 1 GOL GOL . 
I 5 EDO A 1 1408 2 EDO EDO . 
J 4 GOL A 1 1409 3 GOL GOL . 
K 6 HOH A 1 1501 78 HOH HOH . 
K 6 HOH A 2 1502 116 HOH HOH . 
K 6 HOH A 3 1503 28 HOH HOH . 
K 6 HOH A 4 1504 89 HOH HOH . 
K 6 HOH A 5 1505 26 HOH HOH . 
K 6 HOH A 6 1506 85 HOH HOH . 
K 6 HOH A 7 1507 72 HOH HOH . 
K 6 HOH A 8 1508 106 HOH HOH . 
K 6 HOH A 9 1509 104 HOH HOH . 
K 6 HOH A 10 1510 64 HOH HOH . 
K 6 HOH A 11 1511 20 HOH HOH . 
K 6 HOH A 12 1512 112 HOH HOH . 
K 6 HOH A 13 1513 45 HOH HOH . 
K 6 HOH A 14 1514 12 HOH HOH . 
K 6 HOH A 15 1515 55 HOH HOH . 
K 6 HOH A 16 1516 34 HOH HOH . 
K 6 HOH A 17 1517 108 HOH HOH . 
K 6 HOH A 18 1518 17 HOH HOH . 
K 6 HOH A 19 1519 10 HOH HOH . 
K 6 HOH A 20 1520 70 HOH HOH . 
K 6 HOH A 21 1521 47 HOH HOH . 
K 6 HOH A 22 1522 117 HOH HOH . 
K 6 HOH A 23 1523 57 HOH HOH . 
K 6 HOH A 24 1524 115 HOH HOH . 
K 6 HOH A 25 1525 110 HOH HOH . 
K 6 HOH A 26 1526 59 HOH HOH . 
K 6 HOH A 27 1527 1 HOH HOH . 
K 6 HOH A 28 1528 2 HOH HOH . 
K 6 HOH A 29 1529 3 HOH HOH . 
K 6 HOH A 30 1530 4 HOH HOH . 
K 6 HOH A 31 1531 5 HOH HOH . 
K 6 HOH A 32 1532 6 HOH HOH . 
K 6 HOH A 33 1533 7 HOH HOH . 
K 6 HOH A 34 1534 8 HOH HOH . 
K 6 HOH A 35 1535 9 HOH HOH . 
K 6 HOH A 36 1536 11 HOH HOH . 
K 6 HOH A 37 1537 13 HOH HOH . 
K 6 HOH A 38 1538 15 HOH HOH . 
K 6 HOH A 39 1539 16 HOH HOH . 
K 6 HOH A 40 1540 21 HOH HOH . 
K 6 HOH A 41 1541 22 HOH HOH . 
K 6 HOH A 42 1542 23 HOH HOH . 
K 6 HOH A 43 1543 24 HOH HOH . 
K 6 HOH A 44 1544 25 HOH HOH . 
K 6 HOH A 45 1545 27 HOH HOH . 
K 6 HOH A 46 1546 29 HOH HOH . 
K 6 HOH A 47 1547 30 HOH HOH . 
K 6 HOH A 48 1548 31 HOH HOH . 
K 6 HOH A 49 1549 32 HOH HOH . 
K 6 HOH A 50 1550 33 HOH HOH . 
K 6 HOH A 51 1551 35 HOH HOH . 
K 6 HOH A 52 1552 36 HOH HOH . 
K 6 HOH A 53 1553 37 HOH HOH . 
K 6 HOH A 54 1554 38 HOH HOH . 
K 6 HOH A 55 1555 39 HOH HOH . 
K 6 HOH A 56 1556 40 HOH HOH . 
K 6 HOH A 57 1557 41 HOH HOH . 
K 6 HOH A 58 1558 42 HOH HOH . 
K 6 HOH A 59 1559 43 HOH HOH . 
K 6 HOH A 60 1560 44 HOH HOH . 
K 6 HOH A 61 1561 46 HOH HOH . 
K 6 HOH A 62 1562 48 HOH HOH . 
K 6 HOH A 63 1563 49 HOH HOH . 
K 6 HOH A 64 1564 50 HOH HOH . 
K 6 HOH A 65 1565 51 HOH HOH . 
K 6 HOH A 66 1566 52 HOH HOH . 
K 6 HOH A 67 1567 53 HOH HOH . 
K 6 HOH A 68 1568 54 HOH HOH . 
K 6 HOH A 69 1569 56 HOH HOH . 
K 6 HOH A 70 1570 58 HOH HOH . 
K 6 HOH A 71 1571 60 HOH HOH . 
K 6 HOH A 72 1572 65 HOH HOH . 
K 6 HOH A 73 1573 69 HOH HOH . 
K 6 HOH A 74 1574 73 HOH HOH . 
K 6 HOH A 75 1575 74 HOH HOH . 
K 6 HOH A 76 1576 75 HOH HOH . 
K 6 HOH A 77 1577 76 HOH HOH . 
K 6 HOH A 78 1578 77 HOH HOH . 
K 6 HOH A 79 1579 82 HOH HOH . 
K 6 HOH A 80 1580 83 HOH HOH . 
K 6 HOH A 81 1581 86 HOH HOH . 
K 6 HOH A 82 1582 88 HOH HOH . 
K 6 HOH A 83 1583 91 HOH HOH . 
K 6 HOH A 84 1584 92 HOH HOH . 
K 6 HOH A 85 1585 94 HOH HOH . 
K 6 HOH A 86 1586 95 HOH HOH . 
K 6 HOH A 87 1587 97 HOH HOH . 
K 6 HOH A 88 1588 100 HOH HOH . 
K 6 HOH A 89 1589 101 HOH HOH . 
K 6 HOH A 90 1590 103 HOH HOH . 
K 6 HOH A 91 1591 107 HOH HOH . 
K 6 HOH A 92 1592 109 HOH HOH . 
K 6 HOH A 93 1593 111 HOH HOH . 
K 6 HOH A 94 1594 113 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 3DN . . . C 3 -3.579 -5.805 -5.81 1 46.81 ? N1 3DN 1402 A 1 
HETATM 2 C C1 3DN . . . C 3 5.224 -4.565 -5.737 1 22.94 ? C1 3DN 1402 A 1 
HETATM 3 C C2 3DN . . . C 3 5.638 -3.795 -4.633 1 23.34 ? C2 3DN 1402 A 1 
HETATM 4 C C3 3DN . . . C 3 4.639 -3.192 -3.734 1 23.9 ? C3 3DN 1402 A 1 
HETATM 5 C C4 3DN . . . C 3 2.908 -4.308 -5.07 1 26.63 ? C4 3DN 1402 A 1 
HETATM 6 C C5 3DN . . . C 3 3.828 -4.822 -5.927 1 23.45 ? C5 3DN 1402 A 1 
HETATM 7 C C6 3DN . . . C 3 0.578 -4.129 -4.204 1 30.08 ? C6 3DN 1402 A 1 
HETATM 8 C C7 3DN . . . C 3 -0.454 -5.022 -6.599 1 34.08 ? C7 3DN 1402 A 1 
HETATM 9 C C8 3DN . . . C 3 -2.817 -4.545 -5.84 1 40.95 ? C8 3DN 1402 A 1 
HETATM 10 C C9 3DN . . . C 3 -5.818 -6.849 -6.189 1 47.8 ? C9 3DN 1402 A 1 
HETATM 11 C C10 3DN . . . C 3 -2.965 -6.831 -6.679 1 47.65 ? C10 3DN 1402 A 1 
HETATM 12 C C11 3DN . . . C 3 -5.878 -10.369 -6.79 1 54.75 ? C11 3DN 1402 A 1 
HETATM 13 C C12 3DN . . . C 3 -7.373 -8.837 -7.942 1 54.09 ? C12 3DN 1402 A 1 
HETATM 14 O O1 3DN . . . C 3 4.908 -2.378 -2.854 1 27.49 ? O1 3DN 1402 A 1 
HETATM 15 C C13 3DN . . . C 3 6.998 -3.701 -4.339 1 25.88 ? C13 3DN 1402 A 1 
HETATM 16 N N2 3DN . . . C 3 3.336 -3.515 -4.008 1 23.35 ? N2 3DN 1402 A 1 
HETATM 17 C C14 3DN . . . C 3 6.168 -5.164 -6.594 1 25.52 ? C14 3DN 1402 A 1 
HETATM 18 C C15 3DN . . . C 3 5.765 -5.852 -7.876 1 25.4 ? C15 3DN 1402 A 1 
HETATM 19 C C16 3DN . . . C 3 7.516 -5.061 -6.254 1 24.29 ? C16 3DN 1402 A 1 
HETATM 20 C C17 3DN . . . C 3 7.925 -4.358 -5.134 1 24.63 ? C17 3DN 1402 A 1 
HETATM 21 C C18 3DN . . . C 3 1.454 -4.475 -5.233 1 27.5 ? C18 3DN 1402 A 1 
HETATM 22 C C19 3DN . . . C 3 0.919 -4.933 -6.431 1 28.44 ? C19 3DN 1402 A 1 
HETATM 23 C C20 3DN . . . C 3 -1.33 -4.655 -5.583 1 34.69 ? C20 3DN 1402 A 1 
HETATM 24 C C21 3DN . . . C 3 -0.792 -4.226 -4.378 1 30.31 ? C21 3DN 1402 A 1 
HETATM 25 C C22 3DN . . . C 3 -3.724 -8.15 -6.622 1 47.04 ? C22 3DN 1402 A 1 
HETATM 26 C C23 3DN . . . C 3 -5.169 -7.93 -7.039 1 49.08 ? C23 3DN 1402 A 1 
HETATM 27 N N3 3DN . . . C 3 -5.98 -9.147 -7.597 1 54.3 ? N3 3DN 1402 A 1 
HETATM 28 C C24 3DN . . . C 3 -4.979 -5.564 -6.232 1 47.67 ? C24 3DN 1402 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           544 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           28 
#