data_4U6A
#
_model_server_result.job_id            AmpLhwEUYJUdBuYoTxHp-g 
_model_server_result.datetime_utc      '2025-01-10 12:55:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4u6a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1404}' 
#
_entry.id    4U6A 
#
_exptl.entry_id    4U6A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4U6A 
_cell.length_a            81.38 
_cell.length_b            80.98 
_cell.length_c            84.02 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4U6A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        24 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    Monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 H N N 
? 4 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 167 A CYS 1234 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc2 A ND1 HIS 170 A HIS 1237 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
metalc ? metalc3 A SG CYS 175 A CYS 1242 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc4 A SG CYS 178 A CYS 1245 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 198 n n 
C1 C2 GOL sing 199 n n 
C1 H11 GOL sing 200 n n 
C1 H12 GOL sing 201 n n 
O1 HO1 GOL sing 202 n n 
C2 O2 GOL sing 203 n n 
C2 C3 GOL sing 204 n n 
C2 H2 GOL sing 205 n n 
O2 HO2 GOL sing 206 n n 
C3 O3 GOL sing 207 n n 
C3 H31 GOL sing 208 n n 
C3 H32 GOL sing 209 n n 
O3 HO3 GOL sing 210 n n 
#
_atom_sites.entry_id                     4U6A 
_atom_sites.fract_transf_matrix[1][1]    0.012288 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012349 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011902 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 1401 2000 ZN ZN . 
C 3 3DN A 1 1402 3000 3DN 3DN . 
D 4 GOL A 1 1403 1 GOL GOL . 
E 4 GOL A 1 1404 2 GOL GOL . 
F 4 GOL A 1 1405 3 GOL GOL . 
G 5 EDO A 1 1406 1 EDO EDO . 
H 4 GOL A 1 1407 1 GOL GOL . 
I 5 EDO A 1 1408 2 EDO EDO . 
J 4 GOL A 1 1409 3 GOL GOL . 
K 6 HOH A 1 1501 78 HOH HOH . 
K 6 HOH A 2 1502 116 HOH HOH . 
K 6 HOH A 3 1503 28 HOH HOH . 
K 6 HOH A 4 1504 89 HOH HOH . 
K 6 HOH A 5 1505 26 HOH HOH . 
K 6 HOH A 6 1506 85 HOH HOH . 
K 6 HOH A 7 1507 72 HOH HOH . 
K 6 HOH A 8 1508 106 HOH HOH . 
K 6 HOH A 9 1509 104 HOH HOH . 
K 6 HOH A 10 1510 64 HOH HOH . 
K 6 HOH A 11 1511 20 HOH HOH . 
K 6 HOH A 12 1512 112 HOH HOH . 
K 6 HOH A 13 1513 45 HOH HOH . 
K 6 HOH A 14 1514 12 HOH HOH . 
K 6 HOH A 15 1515 55 HOH HOH . 
K 6 HOH A 16 1516 34 HOH HOH . 
K 6 HOH A 17 1517 108 HOH HOH . 
K 6 HOH A 18 1518 17 HOH HOH . 
K 6 HOH A 19 1519 10 HOH HOH . 
K 6 HOH A 20 1520 70 HOH HOH . 
K 6 HOH A 21 1521 47 HOH HOH . 
K 6 HOH A 22 1522 117 HOH HOH . 
K 6 HOH A 23 1523 57 HOH HOH . 
K 6 HOH A 24 1524 115 HOH HOH . 
K 6 HOH A 25 1525 110 HOH HOH . 
K 6 HOH A 26 1526 59 HOH HOH . 
K 6 HOH A 27 1527 1 HOH HOH . 
K 6 HOH A 28 1528 2 HOH HOH . 
K 6 HOH A 29 1529 3 HOH HOH . 
K 6 HOH A 30 1530 4 HOH HOH . 
K 6 HOH A 31 1531 5 HOH HOH . 
K 6 HOH A 32 1532 6 HOH HOH . 
K 6 HOH A 33 1533 7 HOH HOH . 
K 6 HOH A 34 1534 8 HOH HOH . 
K 6 HOH A 35 1535 9 HOH HOH . 
K 6 HOH A 36 1536 11 HOH HOH . 
K 6 HOH A 37 1537 13 HOH HOH . 
K 6 HOH A 38 1538 15 HOH HOH . 
K 6 HOH A 39 1539 16 HOH HOH . 
K 6 HOH A 40 1540 21 HOH HOH . 
K 6 HOH A 41 1541 22 HOH HOH . 
K 6 HOH A 42 1542 23 HOH HOH . 
K 6 HOH A 43 1543 24 HOH HOH . 
K 6 HOH A 44 1544 25 HOH HOH . 
K 6 HOH A 45 1545 27 HOH HOH . 
K 6 HOH A 46 1546 29 HOH HOH . 
K 6 HOH A 47 1547 30 HOH HOH . 
K 6 HOH A 48 1548 31 HOH HOH . 
K 6 HOH A 49 1549 32 HOH HOH . 
K 6 HOH A 50 1550 33 HOH HOH . 
K 6 HOH A 51 1551 35 HOH HOH . 
K 6 HOH A 52 1552 36 HOH HOH . 
K 6 HOH A 53 1553 37 HOH HOH . 
K 6 HOH A 54 1554 38 HOH HOH . 
K 6 HOH A 55 1555 39 HOH HOH . 
K 6 HOH A 56 1556 40 HOH HOH . 
K 6 HOH A 57 1557 41 HOH HOH . 
K 6 HOH A 58 1558 42 HOH HOH . 
K 6 HOH A 59 1559 43 HOH HOH . 
K 6 HOH A 60 1560 44 HOH HOH . 
K 6 HOH A 61 1561 46 HOH HOH . 
K 6 HOH A 62 1562 48 HOH HOH . 
K 6 HOH A 63 1563 49 HOH HOH . 
K 6 HOH A 64 1564 50 HOH HOH . 
K 6 HOH A 65 1565 51 HOH HOH . 
K 6 HOH A 66 1566 52 HOH HOH . 
K 6 HOH A 67 1567 53 HOH HOH . 
K 6 HOH A 68 1568 54 HOH HOH . 
K 6 HOH A 69 1569 56 HOH HOH . 
K 6 HOH A 70 1570 58 HOH HOH . 
K 6 HOH A 71 1571 60 HOH HOH . 
K 6 HOH A 72 1572 65 HOH HOH . 
K 6 HOH A 73 1573 69 HOH HOH . 
K 6 HOH A 74 1574 73 HOH HOH . 
K 6 HOH A 75 1575 74 HOH HOH . 
K 6 HOH A 76 1576 75 HOH HOH . 
K 6 HOH A 77 1577 76 HOH HOH . 
K 6 HOH A 78 1578 77 HOH HOH . 
K 6 HOH A 79 1579 82 HOH HOH . 
K 6 HOH A 80 1580 83 HOH HOH . 
K 6 HOH A 81 1581 86 HOH HOH . 
K 6 HOH A 82 1582 88 HOH HOH . 
K 6 HOH A 83 1583 91 HOH HOH . 
K 6 HOH A 84 1584 92 HOH HOH . 
K 6 HOH A 85 1585 94 HOH HOH . 
K 6 HOH A 86 1586 95 HOH HOH . 
K 6 HOH A 87 1587 97 HOH HOH . 
K 6 HOH A 88 1588 100 HOH HOH . 
K 6 HOH A 89 1589 101 HOH HOH . 
K 6 HOH A 90 1590 103 HOH HOH . 
K 6 HOH A 91 1591 107 HOH HOH . 
K 6 HOH A 92 1592 109 HOH HOH . 
K 6 HOH A 93 1593 111 HOH HOH . 
K 6 HOH A 94 1594 113 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 -1.72 -6.47 -0.805 1 41.01 ? C1 GOL 1404 A 1 
HETATM 2 O O1 GOL . . . E 4 -1.184 -5.273 -0.294 1 39.33 ? O1 GOL 1404 A 1 
HETATM 3 C C2 GOL . . . E 4 -1.753 -7.523 0.276 1 44.23 ? C2 GOL 1404 A 1 
HETATM 4 O O2 GOL . . . E 4 -1.596 -8.82 -0.308 1 44.51 ? O2 GOL 1404 A 1 
HETATM 5 C C3 GOL . . . E 4 -3.086 -7.452 0.979 1 48.38 ? C3 GOL 1404 A 1 
HETATM 6 O O3 GOL . . . E 4 -2.943 -7.718 2.368 1 50.98 ? O3 GOL 1404 A 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           254 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#