data_4U6R # _model_server_result.job_id hG4exO9lTrYst75GeQpjSg _model_server_result.datetime_utc '2025-03-29 03:37:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u6r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1008}' # _entry.id 4U6R # _exptl.entry_id 4U6R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4U6R _cell.length_a 76.847 _cell.length_b 86.433 _cell.length_c 91.818 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U6R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 171 n n N1 C6 EPE sing 172 n n N1 C9 EPE sing 173 n n C2 C3 EPE sing 174 n n C2 H21 EPE sing 175 n n C2 H22 EPE sing 176 n n C3 N4 EPE sing 177 n n C3 H31 EPE sing 178 n n C3 H32 EPE sing 179 n n N4 C5 EPE sing 180 n n N4 C7 EPE sing 181 n n C5 C6 EPE sing 182 n n C5 H51 EPE sing 183 n n C5 H52 EPE sing 184 n n C6 H61 EPE sing 185 n n C6 H62 EPE sing 186 n n C7 C8 EPE sing 187 n n C7 H71 EPE sing 188 n n C7 H72 EPE sing 189 n n C8 O8 EPE sing 190 n n C8 H81 EPE sing 191 n n C8 H82 EPE sing 192 n n O8 HO8 EPE sing 193 n n C9 C10 EPE sing 194 n n C9 H91 EPE sing 195 n n C9 H92 EPE sing 196 n n C10 S EPE sing 197 n n C10 H101 EPE sing 198 n n C10 H102 EPE sing 199 n n S O1S EPE doub 200 n n S O2S EPE doub 201 n n S O3S EPE sing 202 n n O3S HOS3 EPE sing 203 n n # _atom_sites.entry_id 4U6R _atom_sites.fract_transf_matrix[1][1] 0.013013 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010891 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3E4 A 1 1001 1 3E4 UNL . C 3 SO4 A 1 1002 1 SO4 SO4 . D 3 SO4 A 1 1003 2 SO4 SO4 . E 3 SO4 A 1 1004 3 SO4 SO4 . F 3 SO4 A 1 1005 4 SO4 SO4 . G 3 SO4 A 1 1006 5 SO4 SO4 . H 4 EDO A 1 1007 1 EDO EDO . I 5 EPE A 1 1008 1 EPE EPE . J 6 HOH A 1 1101 6 HOH HOH . J 6 HOH A 2 1102 71 HOH HOH . J 6 HOH A 3 1103 42 HOH HOH . J 6 HOH A 4 1104 22 HOH HOH . J 6 HOH A 5 1105 16 HOH HOH . J 6 HOH A 6 1106 27 HOH HOH . J 6 HOH A 7 1107 69 HOH HOH . J 6 HOH A 8 1108 43 HOH HOH . J 6 HOH A 9 1109 18 HOH HOH . J 6 HOH A 10 1110 35 HOH HOH . J 6 HOH A 11 1111 30 HOH HOH . J 6 HOH A 12 1112 2 HOH HOH . J 6 HOH A 13 1113 54 HOH HOH . J 6 HOH A 14 1114 5 HOH HOH . J 6 HOH A 15 1115 51 HOH HOH . J 6 HOH A 16 1116 1 HOH HOH . J 6 HOH A 17 1117 3 HOH HOH . J 6 HOH A 18 1118 4 HOH HOH . J 6 HOH A 19 1119 7 HOH HOH . J 6 HOH A 20 1120 8 HOH HOH . J 6 HOH A 21 1121 9 HOH HOH . J 6 HOH A 22 1122 10 HOH HOH . J 6 HOH A 23 1123 11 HOH HOH . J 6 HOH A 24 1124 12 HOH HOH . J 6 HOH A 25 1125 13 HOH HOH . J 6 HOH A 26 1126 14 HOH HOH . J 6 HOH A 27 1127 15 HOH HOH . J 6 HOH A 28 1128 17 HOH HOH . J 6 HOH A 29 1129 19 HOH HOH . J 6 HOH A 30 1130 20 HOH HOH . J 6 HOH A 31 1131 21 HOH HOH . J 6 HOH A 32 1132 23 HOH HOH . J 6 HOH A 33 1133 24 HOH HOH . J 6 HOH A 34 1134 25 HOH HOH . J 6 HOH A 35 1135 26 HOH HOH . J 6 HOH A 36 1136 28 HOH HOH . J 6 HOH A 37 1137 29 HOH HOH . J 6 HOH A 38 1138 31 HOH HOH . J 6 HOH A 39 1139 32 HOH HOH . J 6 HOH A 40 1140 33 HOH HOH . J 6 HOH A 41 1141 34 HOH HOH . J 6 HOH A 42 1142 36 HOH HOH . J 6 HOH A 43 1143 37 HOH HOH . J 6 HOH A 44 1144 38 HOH HOH . J 6 HOH A 45 1145 39 HOH HOH . J 6 HOH A 46 1146 40 HOH HOH . J 6 HOH A 47 1147 41 HOH HOH . J 6 HOH A 48 1148 44 HOH HOH . J 6 HOH A 49 1149 45 HOH HOH . J 6 HOH A 50 1150 46 HOH HOH . J 6 HOH A 51 1151 47 HOH HOH . J 6 HOH A 52 1152 48 HOH HOH . J 6 HOH A 53 1153 49 HOH HOH . J 6 HOH A 54 1154 50 HOH HOH . J 6 HOH A 55 1155 52 HOH HOH . J 6 HOH A 56 1156 53 HOH HOH . J 6 HOH A 57 1157 55 HOH HOH . J 6 HOH A 58 1158 56 HOH HOH . J 6 HOH A 59 1159 57 HOH HOH . J 6 HOH A 60 1160 58 HOH HOH . J 6 HOH A 61 1161 59 HOH HOH . J 6 HOH A 62 1162 60 HOH HOH . J 6 HOH A 63 1163 61 HOH HOH . J 6 HOH A 64 1164 62 HOH HOH . J 6 HOH A 65 1165 63 HOH HOH . J 6 HOH A 66 1166 64 HOH HOH . J 6 HOH A 67 1167 65 HOH HOH . J 6 HOH A 68 1168 66 HOH HOH . J 6 HOH A 69 1169 67 HOH HOH . J 6 HOH A 70 1170 68 HOH HOH . J 6 HOH A 71 1171 70 HOH HOH . J 6 HOH A 72 1172 72 HOH HOH . J 6 HOH A 73 1173 73 HOH HOH . J 6 HOH A 74 1174 74 HOH HOH . J 6 HOH A 75 1175 75 HOH HOH . J 6 HOH A 76 1176 76 HOH HOH . J 6 HOH A 77 1177 77 HOH HOH . J 6 HOH A 78 1178 78 HOH HOH . J 6 HOH A 79 1179 79 HOH HOH . J 6 HOH A 80 1180 80 HOH HOH . J 6 HOH A 81 1181 81 HOH HOH . J 6 HOH A 82 1182 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . I 5 14.873 -5.014 -15.118 1 51.81 ? N1 EPE 1008 A 1 HETATM 2 C C2 EPE . . . I 5 14.597 -5.35 -13.729 1 53.79 ? C2 EPE 1008 A 1 HETATM 3 C C3 EPE . . . I 5 15.439 -4.411 -12.882 1 54.7 ? C3 EPE 1008 A 1 HETATM 4 N N4 EPE . . . I 5 15.015 -3.043 -13.184 1 56.06 ? N4 EPE 1008 A 1 HETATM 5 C C5 EPE . . . I 5 15.208 -2.704 -14.597 1 54.48 ? C5 EPE 1008 A 1 HETATM 6 C C6 EPE . . . I 5 14.382 -3.674 -15.425 1 53.79 ? C6 EPE 1008 A 1 HETATM 7 C C7 EPE . . . I 5 15.77 -2.106 -12.359 1 59.62 ? C7 EPE 1008 A 1 HETATM 8 C C8 EPE . . . I 5 15.23 -2.136 -10.942 1 58.2 ? C8 EPE 1008 A 1 HETATM 9 O O8 EPE . . . I 5 14.093 -1.282 -10.866 1 57.26 ? O8 EPE 1008 A 1 HETATM 10 C C9 EPE . . . I 5 14.239 -5.992 -15.99 1 53.2 ? C9 EPE 1008 A 1 HETATM 11 C C10 EPE . . . I 5 14.78 -5.821 -17.398 1 53.02 ? C10 EPE 1008 A 1 HETATM 12 S S EPE . . . I 5 15.014 -7.286 -18.1 1 53.02 ? S EPE 1008 A 1 HETATM 13 O O1S EPE . . . I 5 15.189 -7.099 -19.475 1 48.37 ? O1S EPE 1008 A 1 HETATM 14 O O2S EPE . . . I 5 13.762 -8.25 -17.822 1 50.97 ? O2S EPE 1008 A 1 HETATM 15 O O3S EPE . . . I 5 16.179 -7.897 -17.601 1 52.82 ? O3S EPE 1008 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #