data_4U6S # _model_server_result.job_id BwlkTCXNGhwewvgSeo1-lg _model_server_result.datetime_utc '2024-11-02 11:25:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u6s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 4U6S # _exptl.entry_id 4U6S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4U6S _cell.length_a 84.121 _cell.length_b 84.121 _cell.length_c 158.753 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U6S _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1,4 A,B,C,D,E,F 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 -42.0605 72.850923 0 3 'crystal symmetry operation' 9_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -52.917667 4 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -42.0605 72.850923 -52.917667 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D CA CA . A CA 403 1_555 E O2 FMT . A FMT 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc2 D CA CA . A CA 403 1_555 E O1 FMT . A FMT 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc3 D CA CA . A CA 403 1_555 F O HOH . A HOH 637 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc4 D CA CA . A CA 403 1_555 F O HOH . A HOH 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? metalc ? metalc5 D CA CA . A CA 403 1_555 F O HOH . A HOH 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc6 D CA CA . A CA 403 1_555 F O HOH . A HOH 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc7 D CA CA . A CA 403 1_555 F O HOH . A HOH 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 4U6S _atom_sites.fract_transf_matrix[1][1] 0.011888 _atom_sites.fract_transf_matrix[1][2] 0.006863 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013727 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006299 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 401 1 NAD NAD . C 3 PPY A 1 402 1 PPY PPY . D 4 CA A 1 403 1 CA CA . E 5 FMT A 1 404 2 FMT FMT . F 6 HOH A 1 501 197 HOH HOH . F 6 HOH A 2 502 99 HOH HOH . F 6 HOH A 3 503 49 HOH HOH . F 6 HOH A 4 504 116 HOH HOH . F 6 HOH A 5 505 90 HOH HOH . F 6 HOH A 6 506 1 HOH HOH . F 6 HOH A 7 507 10 HOH HOH . F 6 HOH A 8 508 185 HOH HOH . F 6 HOH A 9 509 144 HOH HOH . F 6 HOH A 10 510 127 HOH HOH . F 6 HOH A 11 511 29 HOH HOH . F 6 HOH A 12 512 55 HOH HOH . F 6 HOH A 13 513 138 HOH HOH . F 6 HOH A 14 514 142 HOH HOH . F 6 HOH A 15 515 5 HOH HOH . F 6 HOH A 16 516 94 HOH HOH . F 6 HOH A 17 517 21 HOH HOH . F 6 HOH A 18 518 135 HOH HOH . F 6 HOH A 19 519 54 HOH HOH . F 6 HOH A 20 520 96 HOH HOH . F 6 HOH A 21 521 156 HOH HOH . F 6 HOH A 22 522 188 HOH HOH . F 6 HOH A 23 523 193 HOH HOH . F 6 HOH A 24 524 7 HOH HOH . F 6 HOH A 25 525 103 HOH HOH . F 6 HOH A 26 526 46 HOH HOH . F 6 HOH A 27 527 74 HOH HOH . F 6 HOH A 28 528 59 HOH HOH . F 6 HOH A 29 529 129 HOH HOH . F 6 HOH A 30 530 92 HOH HOH . F 6 HOH A 31 531 151 HOH HOH . F 6 HOH A 32 532 13 HOH HOH . F 6 HOH A 33 533 115 HOH HOH . F 6 HOH A 34 534 126 HOH HOH . F 6 HOH A 35 535 38 HOH HOH . F 6 HOH A 36 536 104 HOH HOH . F 6 HOH A 37 537 146 HOH HOH . F 6 HOH A 38 538 3 HOH HOH . F 6 HOH A 39 539 198 HOH HOH . F 6 HOH A 40 540 101 HOH HOH . F 6 HOH A 41 541 125 HOH HOH . F 6 HOH A 42 542 70 HOH HOH . F 6 HOH A 43 543 175 HOH HOH . F 6 HOH A 44 544 30 HOH HOH . F 6 HOH A 45 545 23 HOH HOH . F 6 HOH A 46 546 91 HOH HOH . F 6 HOH A 47 547 161 HOH HOH . F 6 HOH A 48 548 160 HOH HOH . F 6 HOH A 49 549 118 HOH HOH . F 6 HOH A 50 550 61 HOH HOH . F 6 HOH A 51 551 14 HOH HOH . F 6 HOH A 52 552 93 HOH HOH . F 6 HOH A 53 553 170 HOH HOH . F 6 HOH A 54 554 147 HOH HOH . F 6 HOH A 55 555 83 HOH HOH . F 6 HOH A 56 556 27 HOH HOH . F 6 HOH A 57 557 48 HOH HOH . F 6 HOH A 58 558 67 HOH HOH . F 6 HOH A 59 559 8 HOH HOH . F 6 HOH A 60 560 136 HOH HOH . F 6 HOH A 61 561 172 HOH HOH . F 6 HOH A 62 562 150 HOH HOH . F 6 HOH A 63 563 119 HOH HOH . F 6 HOH A 64 564 11 HOH HOH . F 6 HOH A 65 565 110 HOH HOH . F 6 HOH A 66 566 57 HOH HOH . F 6 HOH A 67 567 178 HOH HOH . F 6 HOH A 68 568 37 HOH HOH . F 6 HOH A 69 569 132 HOH HOH . F 6 HOH A 70 570 182 HOH HOH . F 6 HOH A 71 571 33 HOH HOH . F 6 HOH A 72 572 117 HOH HOH . F 6 HOH A 73 573 102 HOH HOH . F 6 HOH A 74 574 173 HOH HOH . F 6 HOH A 75 575 75 HOH HOH . F 6 HOH A 76 576 200 HOH HOH . F 6 HOH A 77 577 174 HOH HOH . F 6 HOH A 78 578 179 HOH HOH . F 6 HOH A 79 579 158 HOH HOH . F 6 HOH A 80 580 95 HOH HOH . F 6 HOH A 81 581 100 HOH HOH . F 6 HOH A 82 582 56 HOH HOH . F 6 HOH A 83 583 47 HOH HOH . F 6 HOH A 84 584 69 HOH HOH . F 6 HOH A 85 585 52 HOH HOH . F 6 HOH A 86 586 97 HOH HOH . F 6 HOH A 87 587 34 HOH HOH . F 6 HOH A 88 588 194 HOH HOH . F 6 HOH A 89 589 149 HOH HOH . F 6 HOH A 90 590 73 HOH HOH . F 6 HOH A 91 591 177 HOH HOH . F 6 HOH A 92 592 195 HOH HOH . F 6 HOH A 93 593 58 HOH HOH . F 6 HOH A 94 594 76 HOH HOH . F 6 HOH A 95 595 186 HOH HOH . F 6 HOH A 96 596 171 HOH HOH . F 6 HOH A 97 597 2 HOH HOH . F 6 HOH A 98 598 4 HOH HOH . F 6 HOH A 99 599 6 HOH HOH . F 6 HOH A 100 600 9 HOH HOH . F 6 HOH A 101 601 12 HOH HOH . F 6 HOH A 102 602 15 HOH HOH . F 6 HOH A 103 603 16 HOH HOH . F 6 HOH A 104 604 17 HOH HOH . F 6 HOH A 105 605 18 HOH HOH . F 6 HOH A 106 606 19 HOH HOH . F 6 HOH A 107 607 20 HOH HOH . F 6 HOH A 108 608 22 HOH HOH . F 6 HOH A 109 609 24 HOH HOH . F 6 HOH A 110 610 25 HOH HOH . F 6 HOH A 111 611 26 HOH HOH . F 6 HOH A 112 612 28 HOH HOH . F 6 HOH A 113 613 31 HOH HOH . F 6 HOH A 114 614 32 HOH HOH . F 6 HOH A 115 615 35 HOH HOH . F 6 HOH A 116 616 36 HOH HOH . F 6 HOH A 117 617 39 HOH HOH . F 6 HOH A 118 618 40 HOH HOH . F 6 HOH A 119 619 41 HOH HOH . F 6 HOH A 120 620 42 HOH HOH . F 6 HOH A 121 621 43 HOH HOH . F 6 HOH A 122 622 44 HOH HOH . F 6 HOH A 123 623 45 HOH HOH . F 6 HOH A 124 624 50 HOH HOH . F 6 HOH A 125 625 51 HOH HOH . F 6 HOH A 126 626 53 HOH HOH . F 6 HOH A 127 627 60 HOH HOH . F 6 HOH A 128 628 62 HOH HOH . F 6 HOH A 129 629 63 HOH HOH . F 6 HOH A 130 630 64 HOH HOH . F 6 HOH A 131 631 65 HOH HOH . F 6 HOH A 132 632 66 HOH HOH . F 6 HOH A 133 633 68 HOH HOH . F 6 HOH A 134 634 71 HOH HOH . F 6 HOH A 135 635 72 HOH HOH . F 6 HOH A 136 636 77 HOH HOH . F 6 HOH A 137 637 78 HOH HOH . F 6 HOH A 138 638 79 HOH HOH . F 6 HOH A 139 639 80 HOH HOH . F 6 HOH A 140 640 81 HOH HOH . F 6 HOH A 141 641 82 HOH HOH . F 6 HOH A 142 642 84 HOH HOH . F 6 HOH A 143 643 85 HOH HOH . F 6 HOH A 144 644 86 HOH HOH . F 6 HOH A 145 645 87 HOH HOH . F 6 HOH A 146 646 88 HOH HOH . F 6 HOH A 147 647 89 HOH HOH . F 6 HOH A 148 648 98 HOH HOH . F 6 HOH A 149 649 105 HOH HOH . F 6 HOH A 150 650 106 HOH HOH . F 6 HOH A 151 651 107 HOH HOH . F 6 HOH A 152 652 108 HOH HOH . F 6 HOH A 153 653 109 HOH HOH . F 6 HOH A 154 654 111 HOH HOH . F 6 HOH A 155 655 112 HOH HOH . F 6 HOH A 156 656 113 HOH HOH . F 6 HOH A 157 657 114 HOH HOH . F 6 HOH A 158 658 120 HOH HOH . F 6 HOH A 159 659 121 HOH HOH . F 6 HOH A 160 660 122 HOH HOH . F 6 HOH A 161 661 123 HOH HOH . F 6 HOH A 162 662 124 HOH HOH . F 6 HOH A 163 663 128 HOH HOH . F 6 HOH A 164 664 130 HOH HOH . F 6 HOH A 165 665 131 HOH HOH . F 6 HOH A 166 666 133 HOH HOH . F 6 HOH A 167 667 134 HOH HOH . F 6 HOH A 168 668 137 HOH HOH . F 6 HOH A 169 669 139 HOH HOH . F 6 HOH A 170 670 140 HOH HOH . F 6 HOH A 171 671 141 HOH HOH . F 6 HOH A 172 672 143 HOH HOH . F 6 HOH A 173 673 145 HOH HOH . F 6 HOH A 174 674 148 HOH HOH . F 6 HOH A 175 675 152 HOH HOH . F 6 HOH A 176 676 153 HOH HOH . F 6 HOH A 177 677 154 HOH HOH . F 6 HOH A 178 678 155 HOH HOH . F 6 HOH A 179 679 157 HOH HOH . F 6 HOH A 180 680 159 HOH HOH . F 6 HOH A 181 681 162 HOH HOH . F 6 HOH A 182 682 163 HOH HOH . F 6 HOH A 183 683 164 HOH HOH . F 6 HOH A 184 684 165 HOH HOH . F 6 HOH A 185 685 166 HOH HOH . F 6 HOH A 186 686 167 HOH HOH . F 6 HOH A 187 687 168 HOH HOH . F 6 HOH A 188 688 169 HOH HOH . F 6 HOH A 189 689 176 HOH HOH . F 6 HOH A 190 690 180 HOH HOH . F 6 HOH A 191 691 181 HOH HOH . F 6 HOH A 192 692 183 HOH HOH . F 6 HOH A 193 693 184 HOH HOH . F 6 HOH A 194 694 187 HOH HOH . F 6 HOH A 195 695 189 HOH HOH . F 6 HOH A 196 696 190 HOH HOH . F 6 HOH A 197 697 191 HOH HOH . F 6 HOH A 198 698 192 HOH HOH . F 6 HOH A 199 699 196 HOH HOH . F 6 HOH A 200 700 199 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . E 5 -4.785 43.685 -42.006 1 42.03 ? C FMT 404 A 1 HETATM 2 O O1 FMT . . . E 5 -3.912 44.214 -42.696 1 40.57 ? O1 FMT 404 A 1 HETATM 3 O O2 FMT . . . E 5 -5.901 43.416 -42.454 1 27.59 ? O2 FMT 404 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #