data_4U7Z # _model_server_result.job_id YfRP0WwqARPfysPPtLyk4A _model_server_result.datetime_utc '2024-11-08 04:03:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u7z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 4U7Z # _exptl.entry_id 4U7Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 457.681 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[(4-bromo-2-chlorophenyl)amino]-4-fluoro-N-(2-hydroxyethoxy)-1-methyl-1H-benzimidazole-6-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4U7Z _cell.length_a 81.845 _cell.length_b 81.845 _cell.length_c 129.604 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U7Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 135 A ASN 195 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc2 A OD2 ASP 148 A ASP 208 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc3 B MG MG . A MG 501 1_555 D O3G ANP . A ANP 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.944 ? metalc ? metalc4 B MG MG . A MG 501 1_555 D O1B ANP . A ANP 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc5 B MG MG . A MG 501 1_555 D O1A ANP . A ANP 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc6 B MG MG . A MG 501 1_555 E O HOH . A HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? # _chem_comp.formula 'C17 H15 Br Cl F N4 O3' _chem_comp.formula_weight 457.681 _chem_comp.id 3EW _chem_comp.mon_nstd_flag . _chem_comp.name 5-[(4-bromo-2-chlorophenyl)amino]-4-fluoro-N-(2-hydroxyethoxy)-1-methyl-1H-benzimidazole-6-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 N3 3EW sing 1 n n N3 C14 3EW sing 2 n y N3 C2 3EW sing 3 n y C14 N4 3EW doub 4 n y C2 C1 3EW doub 5 n y C2 C3 3EW sing 6 n y C15 O2 3EW sing 7 n n C15 C16 3EW sing 8 n n C1 C6 3EW sing 9 n y N4 C3 3EW sing 10 n y N2 O2 3EW sing 11 n n N2 C7 3EW sing 12 n n C3 C4 3EW doub 13 n y C16 O3 3EW sing 14 n n C6 C7 3EW sing 15 n n C6 C5 3EW doub 16 n y C7 O1 3EW doub 17 n n C4 C5 3EW sing 18 n y C4 F1 3EW sing 19 n n C5 N1 3EW sing 20 n n C9 C10 3EW doub 21 n y C9 C8 3EW sing 22 n y C10 C11 3EW sing 23 n y N1 C8 3EW sing 24 n n C8 C13 3EW doub 25 n y C11 BR1 3EW sing 26 n n C11 C12 3EW doub 27 n y C13 C12 3EW sing 28 n y C13 CL1 3EW sing 29 n n O3 H1 3EW sing 30 n n N1 H2 3EW sing 31 n n N2 H3 3EW sing 32 n n C9 H4 3EW sing 33 n n C10 H5 3EW sing 34 n n C12 H6 3EW sing 35 n n C14 H7 3EW sing 36 n n C15 H8 3EW sing 37 n n C15 H9 3EW sing 38 n n C17 H10 3EW sing 39 n n C17 H11 3EW sing 40 n n C17 H12 3EW sing 41 n n C1 H13 3EW sing 42 n n C16 H14 3EW sing 43 n n C16 H15 3EW sing 44 n n # _atom_sites.entry_id 4U7Z _atom_sites.fract_transf_matrix[1][1] 0.012218 _atom_sites.fract_transf_matrix[1][2] 0.007054 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014108 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007716 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 501 3 MG MG . C 3 3EW A 1 502 1 3EW XXX . D 4 ANP A 1 503 1 ANP DRG . E 5 HOH A 1 601 9 HOH HOH . E 5 HOH A 2 602 10 HOH HOH . E 5 HOH A 3 603 5 HOH HOH . E 5 HOH A 4 604 1 HOH HOH . E 5 HOH A 5 605 2 HOH HOH . E 5 HOH A 6 606 3 HOH HOH . E 5 HOH A 7 607 4 HOH HOH . E 5 HOH A 8 608 6 HOH HOH . E 5 HOH A 9 609 7 HOH HOH . E 5 HOH A 10 610 8 HOH HOH . E 5 HOH A 11 611 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 3EW . . . C 3 -27.136 30.45 15.496 1 74.61 ? O3 3EW 502 A 1 HETATM 2 C C4 3EW . . . C 3 -35.05 30.303 14.906 1 44.53 ? C4 3EW 502 A 1 HETATM 3 C C5 3EW . . . C 3 -33.796 29.723 15.136 1 43.92 ? C5 3EW 502 A 1 HETATM 4 C C6 3EW . . . C 3 -32.732 30.07 14.301 1 47.75 ? C6 3EW 502 A 1 HETATM 5 N N1 3EW . . . C 3 -33.582 28.83 16.148 1 47.63 ? N1 3EW 502 A 1 HETATM 6 C C7 3EW . . . C 3 -31.334 29.564 14.503 1 57.71 ? C7 3EW 502 A 1 HETATM 7 C C8 3EW . . . C 3 -34.271 27.663 16.412 1 56.27 ? C8 3EW 502 A 1 HETATM 8 N N2 3EW . . . C 3 -30.438 29.697 13.525 1 73.54 ? N2 3EW 502 A 1 HETATM 9 C C9 3EW . . . C 3 -35.444 27.316 15.733 1 53.22 ? C9 3EW 502 A 1 HETATM 10 C C10 3EW . . . C 3 -36.154 26.166 16.027 1 56.84 ? C10 3EW 502 A 1 HETATM 11 C C11 3EW . . . C 3 -35.678 25.309 17.022 1 63.98 ? C11 3EW 502 A 1 HETATM 12 C C12 3EW . . . C 3 -34.5 25.628 17.705 1 62.58 ? C12 3EW 502 A 1 HETATM 13 N N3 3EW . . . C 3 -34.609 32.426 12.132 1 53.35 ? N3 3EW 502 A 1 HETATM 14 C C13 3EW . . . C 3 -33.801 26.798 17.406 1 61.45 ? C13 3EW 502 A 1 HETATM 15 C C14 3EW . . . C 3 -35.931 32.646 12.344 1 51.66 ? C14 3EW 502 A 1 HETATM 16 C C15 3EW . . . C 3 -28.036 30.057 13.267 1 84.8 ? C15 3EW 502 A 1 HETATM 17 N N4 3EW . . . C 3 -36.34 31.914 13.409 1 49.02 ? N4 3EW 502 A 1 HETATM 18 BR BR1 3EW . . . C 3 -36.618 23.698 17.43 1 61.64 ? BR1 3EW 502 A 1 HETATM 19 CL CL1 3EW . . . C 3 -32.289 27.151 18.322 1 71.23 ? CL1 3EW 502 A 1 HETATM 20 F F1 3EW . . . C 3 -36.106 30.002 15.689 1 51.97 ? F1 3EW 502 A 1 HETATM 21 C C3 3EW . . . C 3 -35.255 31.212 13.858 1 46.17 ? C3 3EW 502 A 1 HETATM 22 C C17 3EW . . . C 3 -33.729 33.03 11.081 1 44.7 ? C17 3EW 502 A 1 HETATM 23 C C2 3EW . . . C 3 -34.179 31.547 13.052 1 48.85 ? C2 3EW 502 A 1 HETATM 24 C C1 3EW . . . C 3 -32.923 30.982 13.28 1 46.21 ? C1 3EW 502 A 1 HETATM 25 O O1 3EW . . . C 3 -30.986 29.141 15.606 1 54.1 ? O1 3EW 502 A 1 HETATM 26 O O2 3EW . . . C 3 -29.148 29.276 13.745 1 86.06 ? O2 3EW 502 A 1 HETATM 27 C C16 3EW . . . C 3 -26.819 29.957 14.187 1 80.3 ? C16 3EW 502 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #