data_4U8H # _model_server_result.job_id R8Dz_Dnexege9AxnfFB16g _model_server_result.datetime_utc '2025-06-20 07:49:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u8h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2000}' # _entry.id 4U8H # _exptl.entry_id 4U8H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4U8H _cell.length_a 97.675 _cell.length_b 97.675 _cell.length_c 163.213 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U8H _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I 1 1 B,D,F,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 381 C CYS 381 1_555 B SG CYS 430 C CYS 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? covale ? covale1 A NH1 ARG 460 A ARG 460 1_555 D SG CYS 119 D CYS 1213 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.695 ? covale ? covale2 B NE2 HIS 491 C HIS 491 1_555 D SG CYS 119 D CYS 1213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.695 ? metalc ? metalc1 A SG CYS 432 A CYS 432 1_555 E ZN ZN . A ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? metalc ? metalc2 A NH1 ARG 460 A ARG 460 1_555 F ZN ZN . D ZN 2000 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc3 A NE2 HIS 491 A HIS 491 1_555 E ZN ZN . A ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc4 E ZN ZN . A ZN 2000 1_555 C SG CYS 116 B CYS 1210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc5 B NE2 HIS 491 C HIS 491 1_555 F ZN ZN . D ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.857 ? metalc ? metalc6 D SG CYS 116 D CYS 1210 1_555 F ZN ZN . D ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4U8H _atom_sites.fract_transf_matrix[1][1] 0.010238 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010238 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006127 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 2000 2000 ZN ZN . F 3 ZN D 1 2000 2000 ZN ZN . G 4 HOH A 1 2101 80 HOH HOH . G 4 HOH A 2 2102 62 HOH HOH . G 4 HOH A 3 2103 6 HOH HOH . G 4 HOH A 4 2104 22 HOH HOH . G 4 HOH A 5 2105 25 HOH HOH . G 4 HOH A 6 2106 28 HOH HOH . G 4 HOH A 7 2107 31 HOH HOH . G 4 HOH A 8 2108 35 HOH HOH . G 4 HOH A 9 2109 37 HOH HOH . G 4 HOH A 10 2110 53 HOH HOH . G 4 HOH A 11 2111 55 HOH HOH . G 4 HOH A 12 2112 59 HOH HOH . G 4 HOH A 13 2113 68 HOH HOH . G 4 HOH A 14 2114 87 HOH HOH . G 4 HOH A 15 2115 95 HOH HOH . G 4 HOH A 16 2116 97 HOH HOH . G 4 HOH A 17 2117 99 HOH HOH . G 4 HOH A 18 2118 100 HOH HOH . G 4 HOH A 19 2119 104 HOH HOH . H 4 HOH C 1 601 7 HOH HOH . H 4 HOH C 2 602 9 HOH HOH . H 4 HOH C 3 603 11 HOH HOH . H 4 HOH C 4 604 12 HOH HOH . H 4 HOH C 5 605 15 HOH HOH . H 4 HOH C 6 606 20 HOH HOH . H 4 HOH C 7 607 24 HOH HOH . H 4 HOH C 8 608 39 HOH HOH . H 4 HOH C 9 609 42 HOH HOH . H 4 HOH C 10 610 46 HOH HOH . H 4 HOH C 11 611 47 HOH HOH . H 4 HOH C 12 612 49 HOH HOH . H 4 HOH C 13 613 50 HOH HOH . H 4 HOH C 14 614 54 HOH HOH . H 4 HOH C 15 615 57 HOH HOH . H 4 HOH C 16 616 63 HOH HOH . H 4 HOH C 17 617 66 HOH HOH . H 4 HOH C 18 618 77 HOH HOH . H 4 HOH C 19 619 84 HOH HOH . H 4 HOH C 20 620 86 HOH HOH . H 4 HOH C 21 621 96 HOH HOH . H 4 HOH C 22 622 103 HOH HOH . H 4 HOH C 23 623 107 HOH HOH . H 4 HOH C 24 624 117 HOH HOH . H 4 HOH C 25 625 120 HOH HOH . I 4 HOH B 1 1301 14 HOH HOH . I 4 HOH B 2 1302 78 HOH HOH . I 4 HOH B 3 1303 118 HOH HOH . J 4 HOH D 1 2101 10 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 42.887 _atom_site.Cartn_y -0.78 _atom_site.Cartn_z -19.14 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 112.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 2000 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #