data_4U92 # _model_server_result.job_id tEIpYTPLorr4mOuwDFCNgw _model_server_result.datetime_utc '2024-12-26 21:48:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u92 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":102}' # _entry.id 4U92 # _exptl.entry_id 4U92 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 137.327 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BARIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4U92 _cell.length_a 29.621 _cell.length_b 29.621 _cell.length_c 63.737 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U92 _symmetry.cell_setting ? _symmetry.Int_Tables_number 75 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 29.621 29.621 0 3 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 29.621 0 0 4 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 29.621 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O6 DG 5 A DG 5 1_555 E BA BA . A BA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? metalc ? metalc2 A O6 DG 5 A DG 5 1_555 E BA BA . A BA 103 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc3 A O6 DG 7 A DG 7 1_555 D BA BA . A BA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc4 A O6 DG 7 A DG 7 1_555 D BA BA . A BA 102 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc5 A O6 DG 9 A DG 9 1_555 C BA BA . A BA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc6 A O6 DG 9 A DG 9 1_555 C BA BA . A BA 101 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc7 A OP1 DG 9 A DG 9 1_555 F MG MG . A MG 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc8 A O6 DG 10 A DG 10 1_555 C BA BA . A BA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? metalc ? metalc9 A O6 DG 10 A DG 10 1_555 C BA BA . A BA 101 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? metalc ? metalc10 A OP2 DG 10 A DG 10 1_555 F MG MG . A MG 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc11 D BA BA . A BA 102 1_555 K O HOH . A HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? metalc ? metalc12 D BA BA . A BA 102 1_555 K O HOH . A HOH 204 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? metalc ? metalc13 D BA BA . A BA 102 1_555 K O HOH . A HOH 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.935 ? metalc ? metalc14 D BA BA . A BA 102 1_555 K O HOH . A HOH 214 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.935 ? metalc ? metalc15 E BA BA . A BA 103 1_555 K O HOH . A HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc16 E BA BA . A BA 103 1_555 K O HOH . A HOH 204 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc17 F MG MG . A MG 104 1_555 B OP1 DG 9 B DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc18 F MG MG . A MG 104 1_555 B OP2 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc19 F MG MG . A MG 104 1_555 L O HOH . B HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc20 F MG MG . A MG 104 1_555 L O HOH . B HOH 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc21 G MG MG . A MG 105 1_555 K O HOH . A HOH 201 3_645 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc22 G MG MG . A MG 105 1_555 K O HOH . A HOH 203 3_645 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? metalc ? metalc23 B O6 DG 5 B DG 5 1_555 J BA BA . B BA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc24 B O6 DG 5 B DG 5 1_555 J BA BA . B BA 103 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc25 B O6 DG 7 B DG 7 1_555 H BA BA . B BA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc26 B O6 DG 7 B DG 7 1_555 H BA BA . B BA 101 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.683 ? metalc ? metalc27 B O6 DG 9 B DG 9 1_555 I BA BA . B BA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? metalc ? metalc28 B O6 DG 9 B DG 9 1_555 I BA BA . B BA 102 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? metalc ? metalc29 B O6 DG 10 B DG 10 1_555 I BA BA . B BA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc30 B O6 DG 10 B DG 10 1_555 I BA BA . B BA 102 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc31 H BA BA . B BA 101 1_555 L O HOH . B HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? metalc ? metalc32 H BA BA . B BA 101 1_555 L O HOH . B HOH 202 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.823 ? metalc ? metalc33 H BA BA . B BA 101 1_555 L O HOH . B HOH 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.048 ? metalc ? metalc34 H BA BA . B BA 101 1_555 L O HOH . B HOH 220 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 3.048 ? metalc ? metalc35 J BA BA . B BA 103 1_555 L O HOH . B HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? metalc ? metalc36 J BA BA . B BA 103 1_555 L O HOH . B HOH 202 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? # _chem_comp.formula 'Ba 2' _chem_comp.formula_weight 137.327 _chem_comp.id BA _chem_comp.mon_nstd_flag . _chem_comp.name 'BARIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4U92 _atom_sites.fract_transf_matrix[1][1] 0.03376 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.03376 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015689 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BA A 1 101 3 BA BA . D 2 BA A 1 102 4 BA BA . E 2 BA A 1 103 5 BA BA . F 3 MG A 1 104 1 MG MG . G 3 MG A 1 105 2 MG MG . H 2 BA B 1 101 1 BA BA . I 2 BA B 1 102 2 BA BA . J 2 BA B 1 103 6 BA BA . K 4 HOH A 1 201 10 HOH HOH . K 4 HOH A 2 202 28 HOH HOH . K 4 HOH A 3 203 9 HOH HOH . K 4 HOH A 4 204 4 HOH HOH . K 4 HOH A 5 205 53 HOH HOH . K 4 HOH A 6 206 37 HOH HOH . K 4 HOH A 7 207 18 HOH HOH . K 4 HOH A 8 208 52 HOH HOH . K 4 HOH A 9 209 16 HOH HOH . K 4 HOH A 10 210 21 HOH HOH . K 4 HOH A 11 211 15 HOH HOH . K 4 HOH A 12 212 5 HOH HOH . K 4 HOH A 13 213 32 HOH HOH . K 4 HOH A 14 214 67 HOH HOH . K 4 HOH A 15 215 17 HOH HOH . K 4 HOH A 16 216 62 HOH HOH . K 4 HOH A 17 217 88 HOH HOH . K 4 HOH A 18 218 55 HOH HOH . K 4 HOH A 19 219 45 HOH HOH . K 4 HOH A 20 220 46 HOH HOH . K 4 HOH A 21 221 29 HOH HOH . K 4 HOH A 22 222 8 HOH HOH . K 4 HOH A 23 223 35 HOH HOH . K 4 HOH A 24 224 33 HOH HOH . K 4 HOH A 25 225 12 HOH HOH . K 4 HOH A 26 226 31 HOH HOH . K 4 HOH A 27 227 22 HOH HOH . K 4 HOH A 28 228 24 HOH HOH . K 4 HOH A 29 229 41 HOH HOH . K 4 HOH A 30 230 99 HOH HOH . L 4 HOH B 1 201 30 HOH HOH . L 4 HOH B 2 202 1 HOH HOH . L 4 HOH B 3 203 26 HOH HOH . L 4 HOH B 4 204 3 HOH HOH . L 4 HOH B 5 205 20 HOH HOH . L 4 HOH B 6 206 11 HOH HOH . L 4 HOH B 7 207 23 HOH HOH . L 4 HOH B 8 208 43 HOH HOH . L 4 HOH B 9 209 25 HOH HOH . L 4 HOH B 10 210 19 HOH HOH . L 4 HOH B 11 211 13 HOH HOH . L 4 HOH B 12 212 47 HOH HOH . L 4 HOH B 13 213 2 HOH HOH . L 4 HOH B 14 214 61 HOH HOH . L 4 HOH B 15 215 38 HOH HOH . L 4 HOH B 16 216 27 HOH HOH . L 4 HOH B 17 217 14 HOH HOH . L 4 HOH B 18 218 54 HOH HOH . L 4 HOH B 19 219 56 HOH HOH . L 4 HOH B 20 220 66 HOH HOH . L 4 HOH B 21 221 93 HOH HOH . L 4 HOH B 22 222 36 HOH HOH . L 4 HOH B 23 223 92 HOH HOH . L 4 HOH B 24 224 59 HOH HOH . L 4 HOH B 25 225 34 HOH HOH . L 4 HOH B 26 226 6 HOH HOH . L 4 HOH B 27 227 65 HOH HOH . L 4 HOH B 28 228 48 HOH HOH . L 4 HOH B 29 229 7 HOH HOH . L 4 HOH B 30 230 42 HOH HOH . L 4 HOH B 31 231 87 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BA _atom_site.label_atom_id BA _atom_site.label_comp_id BA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x 14.81 _atom_site.Cartn_y 14.81 _atom_site.Cartn_z -7.688 _atom_site.occupancy 0.24 _atom_site.B_iso_or_equiv 8.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BA _atom_site.auth_comp_id BA _atom_site.auth_seq_id 102 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #