data_4U97 # _model_server_result.job_id wO33vgBPJ8i5_jEfd6D9aA _model_server_result.datetime_utc '2024-12-27 09:41:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u97 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 4U97 # _exptl.entry_id 4U97 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.531 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description STAUROSPORINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4U97 _cell.length_a 87.58 _cell.length_b 87.58 _cell.length_c 421.58 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U97 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C28 H26 N4 O3' _chem_comp.formula_weight 466.531 _chem_comp.id STU _chem_comp.mon_nstd_flag . _chem_comp.name STAUROSPORINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C25 STU sing 294 n n O4 C21 STU sing 295 n n C25 C24 STU sing 296 n n C25 N3 STU sing 297 n n C25 H25 STU sing 298 n n C24 C23 STU sing 299 n n C24 H241 STU sing 300 n n C24 H242 STU sing 301 n n C23 C22 STU sing 302 n n C23 N4 STU sing 303 n n C23 H23 STU sing 304 n n C22 C21 STU sing 305 n n C22 O6 STU sing 306 n n C22 H22 STU sing 307 n n C21 C26 STU sing 308 n n C21 N2 STU sing 309 n n C26 H261 STU sing 310 n n C26 H262 STU sing 311 n n C26 H263 STU sing 312 n n N2 C18 STU sing 313 n y N2 C17 STU sing 314 n y C18 C19 STU doub 315 n y C18 C11 STU sing 316 n y C19 C6 STU sing 317 n y C19 N3 STU sing 318 n y C6 C7 STU doub 319 n y C6 C5 STU sing 320 n y C7 C10 STU sing 321 n y C7 C8 STU sing 322 n n C10 C11 STU doub 323 n y C10 C9 STU sing 324 n n C11 C12 STU sing 325 n y C12 C17 STU doub 326 n y C12 C13 STU sing 327 n y C17 C16 STU sing 328 n y C16 C15 STU doub 329 n y C16 H16 STU sing 330 n n C15 C14 STU sing 331 n y C15 H15 STU sing 332 n n C14 C13 STU doub 333 n y C14 H14 STU sing 334 n n C13 H13 STU sing 335 n n C9 N1 STU sing 336 n n C9 H91 STU sing 337 n n C9 H92 STU sing 338 n n N1 C8 STU sing 339 n n N1 HN1 STU sing 340 n n C8 O5 STU doub 341 n n C5 C20 STU doub 342 n y C5 C4 STU sing 343 n y C20 C1 STU sing 344 n y C20 N3 STU sing 345 n y C1 C2 STU doub 346 n y C1 H1 STU sing 347 n n C2 C3 STU sing 348 n y C2 H2 STU sing 349 n n C3 C4 STU doub 350 n y C3 H3 STU sing 351 n n C4 H4 STU sing 352 n n O6 C27 STU sing 353 n n C27 H271 STU sing 354 n n C27 H272 STU sing 355 n n C27 H273 STU sing 356 n n N4 C28 STU sing 357 n n N4 HN4 STU sing 358 n n C28 H281 STU sing 359 n n C28 H282 STU sing 360 n n C28 H283 STU sing 361 n n # _atom_sites.entry_id 4U97 _atom_sites.fract_transf_matrix[1][1] 0.011418 _atom_sites.fract_transf_matrix[1][2] 0.006592 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013185 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002372 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 STU A 1 501 2 STU STU . D 2 STU B 1 501 1 STU STU . E 3 SO4 B 1 502 1 SO4 SO4 . F 3 SO4 B 1 503 2 SO4 SO4 . G 3 SO4 B 1 504 3 SO4 SO4 . H 4 HOH A 1 601 67 HOH HOH . H 4 HOH A 2 602 48 HOH HOH . H 4 HOH A 3 603 58 HOH HOH . H 4 HOH A 4 604 35 HOH HOH . H 4 HOH A 5 605 30 HOH HOH . H 4 HOH A 6 606 16 HOH HOH . H 4 HOH A 7 607 51 HOH HOH . H 4 HOH A 8 608 95 HOH HOH . H 4 HOH A 9 609 71 HOH HOH . H 4 HOH A 10 610 13 HOH HOH . H 4 HOH A 11 611 52 HOH HOH . H 4 HOH A 12 612 73 HOH HOH . H 4 HOH A 13 613 59 HOH HOH . H 4 HOH A 14 614 3 HOH HOH . H 4 HOH A 15 615 4 HOH HOH . H 4 HOH A 16 616 6 HOH HOH . H 4 HOH A 17 617 7 HOH HOH . H 4 HOH A 18 618 8 HOH HOH . H 4 HOH A 19 619 9 HOH HOH . H 4 HOH A 20 620 11 HOH HOH . H 4 HOH A 21 621 12 HOH HOH . H 4 HOH A 22 622 14 HOH HOH . H 4 HOH A 23 623 18 HOH HOH . H 4 HOH A 24 624 21 HOH HOH . H 4 HOH A 25 625 22 HOH HOH . H 4 HOH A 26 626 23 HOH HOH . H 4 HOH A 27 627 24 HOH HOH . H 4 HOH A 28 628 26 HOH HOH . H 4 HOH A 29 629 28 HOH HOH . H 4 HOH A 30 630 31 HOH HOH . H 4 HOH A 31 631 32 HOH HOH . H 4 HOH A 32 632 34 HOH HOH . H 4 HOH A 33 633 41 HOH HOH . H 4 HOH A 34 634 44 HOH HOH . H 4 HOH A 35 635 46 HOH HOH . H 4 HOH A 36 636 49 HOH HOH . H 4 HOH A 37 637 50 HOH HOH . H 4 HOH A 38 638 55 HOH HOH . H 4 HOH A 39 639 57 HOH HOH . H 4 HOH A 40 640 62 HOH HOH . H 4 HOH A 41 641 66 HOH HOH . H 4 HOH A 42 642 68 HOH HOH . H 4 HOH A 43 643 69 HOH HOH . H 4 HOH A 44 644 70 HOH HOH . H 4 HOH A 45 645 72 HOH HOH . H 4 HOH A 46 646 74 HOH HOH . H 4 HOH A 47 647 75 HOH HOH . H 4 HOH A 48 648 77 HOH HOH . H 4 HOH A 49 649 79 HOH HOH . H 4 HOH A 50 650 80 HOH HOH . H 4 HOH A 51 651 84 HOH HOH . H 4 HOH A 52 652 86 HOH HOH . H 4 HOH A 53 653 90 HOH HOH . H 4 HOH A 54 654 91 HOH HOH . I 4 HOH B 1 601 20 HOH HOH . I 4 HOH B 2 602 96 HOH HOH . I 4 HOH B 3 603 25 HOH HOH . I 4 HOH B 4 604 45 HOH HOH . I 4 HOH B 5 605 94 HOH HOH . I 4 HOH B 6 606 63 HOH HOH . I 4 HOH B 7 607 39 HOH HOH . I 4 HOH B 8 608 1 HOH HOH . I 4 HOH B 9 609 2 HOH HOH . I 4 HOH B 10 610 5 HOH HOH . I 4 HOH B 11 611 10 HOH HOH . I 4 HOH B 12 612 15 HOH HOH . I 4 HOH B 13 613 17 HOH HOH . I 4 HOH B 14 614 19 HOH HOH . I 4 HOH B 15 615 27 HOH HOH . I 4 HOH B 16 616 29 HOH HOH . I 4 HOH B 17 617 33 HOH HOH . I 4 HOH B 18 618 36 HOH HOH . I 4 HOH B 19 619 37 HOH HOH . I 4 HOH B 20 620 38 HOH HOH . I 4 HOH B 21 621 40 HOH HOH . I 4 HOH B 22 622 42 HOH HOH . I 4 HOH B 23 623 43 HOH HOH . I 4 HOH B 24 624 47 HOH HOH . I 4 HOH B 25 625 53 HOH HOH . I 4 HOH B 26 626 54 HOH HOH . I 4 HOH B 27 627 56 HOH HOH . I 4 HOH B 28 628 60 HOH HOH . I 4 HOH B 29 629 61 HOH HOH . I 4 HOH B 30 630 64 HOH HOH . I 4 HOH B 31 631 65 HOH HOH . I 4 HOH B 32 632 76 HOH HOH . I 4 HOH B 33 633 78 HOH HOH . I 4 HOH B 34 634 81 HOH HOH . I 4 HOH B 35 635 82 HOH HOH . I 4 HOH B 36 636 83 HOH HOH . I 4 HOH B 37 637 85 HOH HOH . I 4 HOH B 38 638 87 HOH HOH . I 4 HOH B 39 639 88 HOH HOH . I 4 HOH B 40 640 89 HOH HOH . I 4 HOH B 41 641 92 HOH HOH . I 4 HOH B 42 642 93 HOH HOH . I 4 HOH B 43 643 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 STU . . . D 2 96.965 27.24 -23.22 1 35.21 ? O4 STU 501 B 1 HETATM 2 C C25 STU . . . D 2 97.87 28.314 -23.811 1 38.12 ? C25 STU 501 B 1 HETATM 3 C C24 STU . . . D 2 98.117 29.385 -22.811 1 30.19 ? C24 STU 501 B 1 HETATM 4 C C23 STU . . . D 2 97.436 29.046 -21.535 1 31.64 ? C23 STU 501 B 1 HETATM 5 C C22 STU . . . D 2 95.965 28.941 -21.823 1 37.83 ? C22 STU 501 B 1 HETATM 6 C C21 STU . . . D 2 95.7 27.684 -22.539 1 36.7 ? C21 STU 501 B 1 HETATM 7 C C26 STU . . . D 2 95.374 26.579 -21.526 1 36.14 ? C26 STU 501 B 1 HETATM 8 N N2 STU . . . D 2 94.702 27.941 -23.522 1 47.59 ? N2 STU 501 B 1 HETATM 9 C C18 STU . . . D 2 94.918 28.403 -24.771 1 48.37 ? C18 STU 501 B 1 HETATM 10 C C19 STU . . . D 2 96.061 28.748 -25.415 1 44.22 ? C19 STU 501 B 1 HETATM 11 C C6 STU . . . D 2 96.008 29.224 -26.769 1 48.62 ? C6 STU 501 B 1 HETATM 12 C C7 STU . . . D 2 94.762 29.358 -27.441 1 46.42 ? C7 STU 501 B 1 HETATM 13 C C10 STU . . . D 2 93.624 29.013 -26.759 1 46.45 ? C10 STU 501 B 1 HETATM 14 C C11 STU . . . D 2 93.678 28.549 -25.449 1 52.98 ? C11 STU 501 B 1 HETATM 15 C C12 STU . . . D 2 92.691 28.136 -24.537 1 55.64 ? C12 STU 501 B 1 HETATM 16 C C17 STU . . . D 2 93.343 27.768 -23.341 1 52.51 ? C17 STU 501 B 1 HETATM 17 C C16 STU . . . D 2 92.554 27.319 -22.26 1 53.16 ? C16 STU 501 B 1 HETATM 18 C C15 STU . . . D 2 91.166 27.255 -22.426 1 50.85 ? C15 STU 501 B 1 HETATM 19 C C14 STU . . . D 2 90.549 27.614 -23.598 1 54.23 ? C14 STU 501 B 1 HETATM 20 C C13 STU . . . D 2 91.287 28.065 -24.688 1 56.4 ? C13 STU 501 B 1 HETATM 21 C C9 STU . . . D 2 92.426 29.231 -27.696 1 43.01 ? C9 STU 501 B 1 HETATM 22 N N1 STU . . . D 2 92.942 29.729 -28.932 1 44.13 ? N1 STU 501 B 1 HETATM 23 C C8 STU . . . D 2 94.342 29.822 -28.838 1 43.01 ? C8 STU 501 B 1 HETATM 24 O O5 STU . . . D 2 95.044 30.21 -29.753 1 44.86 ? O5 STU 501 B 1 HETATM 25 C C5 STU . . . D 2 97.35 29.47 -27.134 1 37.36 ? C5 STU 501 B 1 HETATM 26 C C20 STU . . . D 2 98.157 29.148 -26.015 1 40.11 ? C20 STU 501 B 1 HETATM 27 C C1 STU . . . D 2 99.559 29.299 -26.073 1 37.94 ? C1 STU 501 B 1 HETATM 28 C C2 STU . . . D 2 100.099 29.772 -27.27 1 29.18 ? C2 STU 501 B 1 HETATM 29 C C3 STU . . . D 2 99.312 30.1 -28.357 1 35.15 ? C3 STU 501 B 1 HETATM 30 C C4 STU . . . D 2 97.92 29.954 -28.329 1 33.6 ? C4 STU 501 B 1 HETATM 31 N N3 STU . . . D 2 97.299 28.733 -25.01 1 38.88 ? N3 STU 501 B 1 HETATM 32 O O6 STU . . . D 2 95.566 29.985 -22.729 1 20.4 ? O6 STU 501 B 1 HETATM 33 C C27 STU . . . D 2 94.737 31.022 -22.199 1 30.06 ? C27 STU 501 B 1 HETATM 34 N N4 STU . . . D 2 97.738 30.095 -20.572 1 34.35 ? N4 STU 501 B 1 HETATM 35 C C28 STU . . . D 2 97.217 29.813 -19.251 1 20.62 ? C28 STU 501 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #