data_4U9B # _model_server_result.job_id S8s_GM6bQqjyRrjx3X_weg _model_server_result.datetime_utc '2024-12-08 03:10:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u9b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 4U9B # _exptl.entry_id 4U9B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 30.006 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRIC OXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4U9B _cell.length_a 67.636 _cell.length_b 86.716 _cell.length_c 33.822 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U9B _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 139 A CYS 139 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc2 A NE2 HIS 161 A HIS 161 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc3 A SG CYS 164 A CYS 164 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc4 A SG CYS 172 A CYS 172 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc5 B FE HEM . A HEM 201 1_555 C N NO . A NO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.797 ? # _chem_comp.formula 'N O' _chem_comp.formula_weight 30.006 _chem_comp.id NO _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRIC OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Nitrogen monoxide' # _chem_comp_bond.atom_id_1 N _chem_comp_bond.atom_id_2 O _chem_comp_bond.comp_id NO _chem_comp_bond.value_order doub _chem_comp_bond.pdbx_ordinal 332 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 4U9B _atom_sites.fract_transf_matrix[1][1] 0.014785 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011532 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 500 HEM HEM . C 3 NO A 1 202 600 NO NO . D 4 ZN A 1 203 1 ZN ZN . E 5 PO4 A 1 204 1 PO4 PO4 . F 6 GOL A 1 205 2 GOL GOL . G 7 HOH A 1 301 69 HOH HOH . G 7 HOH A 2 302 86 HOH HOH . G 7 HOH A 3 303 52 HOH HOH . G 7 HOH A 4 304 83 HOH HOH . G 7 HOH A 5 305 48 HOH HOH . G 7 HOH A 6 306 33 HOH HOH . G 7 HOH A 7 307 67 HOH HOH . G 7 HOH A 8 308 111 HOH HOH . G 7 HOH A 9 309 27 HOH HOH . G 7 HOH A 10 310 40 HOH HOH . G 7 HOH A 11 311 59 HOH HOH . G 7 HOH A 12 312 9 HOH HOH . G 7 HOH A 13 313 77 HOH HOH . G 7 HOH A 14 314 57 HOH HOH . G 7 HOH A 15 315 91 HOH HOH . G 7 HOH A 16 316 45 HOH HOH . G 7 HOH A 17 317 87 HOH HOH . G 7 HOH A 18 318 25 HOH HOH . G 7 HOH A 19 319 8 HOH HOH . G 7 HOH A 20 320 6 HOH HOH . G 7 HOH A 21 321 10 HOH HOH . G 7 HOH A 22 322 66 HOH HOH . G 7 HOH A 23 323 14 HOH HOH . G 7 HOH A 24 324 21 HOH HOH . G 7 HOH A 25 325 96 HOH HOH . G 7 HOH A 26 326 4 HOH HOH . G 7 HOH A 27 327 76 HOH HOH . G 7 HOH A 28 328 68 HOH HOH . G 7 HOH A 29 329 31 HOH HOH . G 7 HOH A 30 330 64 HOH HOH . G 7 HOH A 31 331 75 HOH HOH . G 7 HOH A 32 332 78 HOH HOH . G 7 HOH A 33 333 50 HOH HOH . G 7 HOH A 34 334 107 HOH HOH . G 7 HOH A 35 335 97 HOH HOH . G 7 HOH A 36 336 42 HOH HOH . G 7 HOH A 37 337 46 HOH HOH . G 7 HOH A 38 338 34 HOH HOH . G 7 HOH A 39 339 13 HOH HOH . G 7 HOH A 40 340 98 HOH HOH . G 7 HOH A 41 341 61 HOH HOH . G 7 HOH A 42 342 104 HOH HOH . G 7 HOH A 43 343 94 HOH HOH . G 7 HOH A 44 344 28 HOH HOH . G 7 HOH A 45 345 1 HOH HOH . G 7 HOH A 46 346 23 HOH HOH . G 7 HOH A 47 347 30 HOH HOH . G 7 HOH A 48 348 90 HOH HOH . G 7 HOH A 49 349 35 HOH HOH . G 7 HOH A 50 350 36 HOH HOH . G 7 HOH A 51 351 88 HOH HOH . G 7 HOH A 52 352 29 HOH HOH . G 7 HOH A 53 353 65 HOH HOH . G 7 HOH A 54 354 120 HOH HOH . G 7 HOH A 55 355 101 HOH HOH . G 7 HOH A 56 356 110 HOH HOH . G 7 HOH A 57 357 93 HOH HOH . G 7 HOH A 58 358 81 HOH HOH . G 7 HOH A 59 359 79 HOH HOH . G 7 HOH A 60 360 82 HOH HOH . G 7 HOH A 61 361 2 HOH HOH . G 7 HOH A 62 362 3 HOH HOH . G 7 HOH A 63 363 5 HOH HOH . G 7 HOH A 64 364 7 HOH HOH . G 7 HOH A 65 365 11 HOH HOH . G 7 HOH A 66 366 12 HOH HOH . G 7 HOH A 67 367 15 HOH HOH . G 7 HOH A 68 368 16 HOH HOH . G 7 HOH A 69 369 17 HOH HOH . G 7 HOH A 70 370 18 HOH HOH . G 7 HOH A 71 371 19 HOH HOH . G 7 HOH A 72 372 20 HOH HOH . G 7 HOH A 73 373 22 HOH HOH . G 7 HOH A 74 374 24 HOH HOH . G 7 HOH A 75 375 26 HOH HOH . G 7 HOH A 76 376 32 HOH HOH . G 7 HOH A 77 377 37 HOH HOH . G 7 HOH A 78 378 38 HOH HOH . G 7 HOH A 79 379 39 HOH HOH . G 7 HOH A 80 380 41 HOH HOH . G 7 HOH A 81 381 43 HOH HOH . G 7 HOH A 82 382 44 HOH HOH . G 7 HOH A 83 383 47 HOH HOH . G 7 HOH A 84 384 49 HOH HOH . G 7 HOH A 85 385 51 HOH HOH . G 7 HOH A 86 386 53 HOH HOH . G 7 HOH A 87 387 54 HOH HOH . G 7 HOH A 88 388 55 HOH HOH . G 7 HOH A 89 389 56 HOH HOH . G 7 HOH A 90 390 58 HOH HOH . G 7 HOH A 91 391 60 HOH HOH . G 7 HOH A 92 392 62 HOH HOH . G 7 HOH A 93 393 63 HOH HOH . G 7 HOH A 94 394 70 HOH HOH . G 7 HOH A 95 395 71 HOH HOH . G 7 HOH A 96 396 72 HOH HOH . G 7 HOH A 97 397 73 HOH HOH . G 7 HOH A 98 398 74 HOH HOH . G 7 HOH A 99 399 80 HOH HOH . G 7 HOH A 100 400 84 HOH HOH . G 7 HOH A 101 401 85 HOH HOH . G 7 HOH A 102 402 89 HOH HOH . G 7 HOH A 103 403 92 HOH HOH . G 7 HOH A 104 404 95 HOH HOH . G 7 HOH A 105 405 99 HOH HOH . G 7 HOH A 106 406 100 HOH HOH . G 7 HOH A 107 407 102 HOH HOH . G 7 HOH A 108 408 103 HOH HOH . G 7 HOH A 109 409 105 HOH HOH . G 7 HOH A 110 410 106 HOH HOH . G 7 HOH A 111 411 108 HOH HOH . G 7 HOH A 112 412 109 HOH HOH . G 7 HOH A 113 413 112 HOH HOH . G 7 HOH A 114 414 113 HOH HOH . G 7 HOH A 115 415 114 HOH HOH . G 7 HOH A 116 416 115 HOH HOH . G 7 HOH A 117 417 116 HOH HOH . G 7 HOH A 118 418 117 HOH HOH . G 7 HOH A 119 419 118 HOH HOH . G 7 HOH A 120 420 119 HOH HOH . G 7 HOH A 121 421 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO . . . C 3 24.149 104.745 5.205 1 26.58 ? N NO 202 A 1 HETATM 2 O O NO . . . C 3 24.919 105.748 5.902 1 26.04 ? O NO 202 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 2 #