data_4U9O # _model_server_result.job_id NPgju3j-_MJ2VIUMrZ6xZg _model_server_result.datetime_utc '2024-11-21 14:13:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u9o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4U9O # _exptl.entry_id 4U9O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,3-DIHYDROXY-1,4-DITHIOBUTANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4U9O _cell.length_a 78.27 _cell.length_b 84.31 _cell.length_c 102.86 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U9O _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details Monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 195 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 192 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id S1 _struct_conn.ptnr2_label_comp_id DTT _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id DTT _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.042 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id DTT _chem_comp.mon_nstd_flag . _chem_comp.name 2,3-DIHYDROXY-1,4-DITHIOBUTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1,4-DITHIOTHREITOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C1 DTT sing 83 n n S1 HS1 DTT sing 84 n n C1 C2 DTT sing 85 n n C1 H11 DTT sing 86 n n C1 H12 DTT sing 87 n n C2 O2 DTT sing 88 n n C2 C3 DTT sing 89 n n C2 H2 DTT sing 90 n n O2 HO2 DTT sing 91 n n C3 O3 DTT sing 92 n n C3 C4 DTT sing 93 n n C3 H3 DTT sing 94 n n O3 HO3 DTT sing 95 n n C4 S4 DTT sing 96 n n C4 H41 DTT sing 97 n n C4 H42 DTT sing 98 n n S4 HS2 DTT sing 99 n n # _atom_sites.entry_id 4U9O _atom_sites.fract_transf_matrix[1][1] 0.012776 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011861 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009722 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DTT A 1 401 1 DTT DTT . C 3 HOH A 1 501 236 HOH HOH . C 3 HOH A 2 502 93 HOH HOH . C 3 HOH A 3 503 221 HOH HOH . C 3 HOH A 4 504 188 HOH HOH . C 3 HOH A 5 505 218 HOH HOH . C 3 HOH A 6 506 234 HOH HOH . C 3 HOH A 7 507 237 HOH HOH . C 3 HOH A 8 508 109 HOH HOH . C 3 HOH A 9 509 223 HOH HOH . C 3 HOH A 10 510 162 HOH HOH . C 3 HOH A 11 511 125 HOH HOH . C 3 HOH A 12 512 65 HOH HOH . C 3 HOH A 13 513 32 HOH HOH . C 3 HOH A 14 514 211 HOH HOH . C 3 HOH A 15 515 233 HOH HOH . C 3 HOH A 16 516 128 HOH HOH . C 3 HOH A 17 517 177 HOH HOH . C 3 HOH A 18 518 136 HOH HOH . C 3 HOH A 19 519 97 HOH HOH . C 3 HOH A 20 520 96 HOH HOH . C 3 HOH A 21 521 180 HOH HOH . C 3 HOH A 22 522 92 HOH HOH . C 3 HOH A 23 523 26 HOH HOH . C 3 HOH A 24 524 108 HOH HOH . C 3 HOH A 25 525 253 HOH HOH . C 3 HOH A 26 526 139 HOH HOH . C 3 HOH A 27 527 174 HOH HOH . C 3 HOH A 28 528 54 HOH HOH . C 3 HOH A 29 529 88 HOH HOH . C 3 HOH A 30 530 135 HOH HOH . C 3 HOH A 31 531 256 HOH HOH . C 3 HOH A 32 532 175 HOH HOH . C 3 HOH A 33 533 160 HOH HOH . C 3 HOH A 34 534 227 HOH HOH . C 3 HOH A 35 535 2 HOH HOH . C 3 HOH A 36 536 78 HOH HOH . C 3 HOH A 37 537 138 HOH HOH . C 3 HOH A 38 538 164 HOH HOH . C 3 HOH A 39 539 23 HOH HOH . C 3 HOH A 40 540 7 HOH HOH . C 3 HOH A 41 541 119 HOH HOH . C 3 HOH A 42 542 55 HOH HOH . C 3 HOH A 43 543 154 HOH HOH . C 3 HOH A 44 544 95 HOH HOH . C 3 HOH A 45 545 59 HOH HOH . C 3 HOH A 46 546 150 HOH HOH . C 3 HOH A 47 547 42 HOH HOH . C 3 HOH A 48 548 70 HOH HOH . C 3 HOH A 49 549 130 HOH HOH . C 3 HOH A 50 550 49 HOH HOH . C 3 HOH A 51 551 50 HOH HOH . C 3 HOH A 52 552 76 HOH HOH . C 3 HOH A 53 553 45 HOH HOH . C 3 HOH A 54 554 102 HOH HOH . C 3 HOH A 55 555 15 HOH HOH . C 3 HOH A 56 556 38 HOH HOH . C 3 HOH A 57 557 1 HOH HOH . C 3 HOH A 58 558 205 HOH HOH . C 3 HOH A 59 559 185 HOH HOH . C 3 HOH A 60 560 110 HOH HOH . C 3 HOH A 61 561 39 HOH HOH . C 3 HOH A 62 562 114 HOH HOH . C 3 HOH A 63 563 238 HOH HOH . C 3 HOH A 64 564 184 HOH HOH . C 3 HOH A 65 565 214 HOH HOH . C 3 HOH A 66 566 46 HOH HOH . C 3 HOH A 67 567 64 HOH HOH . C 3 HOH A 68 568 47 HOH HOH . C 3 HOH A 69 569 254 HOH HOH . C 3 HOH A 70 570 34 HOH HOH . C 3 HOH A 71 571 19 HOH HOH . C 3 HOH A 72 572 113 HOH HOH . C 3 HOH A 73 573 107 HOH HOH . C 3 HOH A 74 574 75 HOH HOH . C 3 HOH A 75 575 103 HOH HOH . C 3 HOH A 76 576 77 HOH HOH . C 3 HOH A 77 577 10 HOH HOH . C 3 HOH A 78 578 91 HOH HOH . C 3 HOH A 79 579 9 HOH HOH . C 3 HOH A 80 580 8 HOH HOH . C 3 HOH A 81 581 60 HOH HOH . C 3 HOH A 82 582 129 HOH HOH . C 3 HOH A 83 583 210 HOH HOH . C 3 HOH A 84 584 155 HOH HOH . C 3 HOH A 85 585 176 HOH HOH . C 3 HOH A 86 586 222 HOH HOH . C 3 HOH A 87 587 29 HOH HOH . C 3 HOH A 88 588 5 HOH HOH . C 3 HOH A 89 589 127 HOH HOH . C 3 HOH A 90 590 133 HOH HOH . C 3 HOH A 91 591 178 HOH HOH . C 3 HOH A 92 592 24 HOH HOH . C 3 HOH A 93 593 208 HOH HOH . C 3 HOH A 94 594 118 HOH HOH . C 3 HOH A 95 595 31 HOH HOH . C 3 HOH A 96 596 228 HOH HOH . C 3 HOH A 97 597 14 HOH HOH . C 3 HOH A 98 598 12 HOH HOH . C 3 HOH A 99 599 167 HOH HOH . C 3 HOH A 100 600 40 HOH HOH . C 3 HOH A 101 601 58 HOH HOH . C 3 HOH A 102 602 79 HOH HOH . C 3 HOH A 103 603 37 HOH HOH . C 3 HOH A 104 604 82 HOH HOH . C 3 HOH A 105 605 120 HOH HOH . C 3 HOH A 106 606 105 HOH HOH . C 3 HOH A 107 607 166 HOH HOH . C 3 HOH A 108 608 171 HOH HOH . C 3 HOH A 109 609 252 HOH HOH . C 3 HOH A 110 610 229 HOH HOH . C 3 HOH A 111 611 112 HOH HOH . C 3 HOH A 112 612 146 HOH HOH . C 3 HOH A 113 613 215 HOH HOH . C 3 HOH A 114 614 20 HOH HOH . C 3 HOH A 115 615 204 HOH HOH . C 3 HOH A 116 616 30 HOH HOH . C 3 HOH A 117 617 51 HOH HOH . C 3 HOH A 118 618 89 HOH HOH . C 3 HOH A 119 619 161 HOH HOH . C 3 HOH A 120 620 44 HOH HOH . C 3 HOH A 121 621 126 HOH HOH . C 3 HOH A 122 622 16 HOH HOH . C 3 HOH A 123 623 52 HOH HOH . C 3 HOH A 124 624 100 HOH HOH . C 3 HOH A 125 625 69 HOH HOH . C 3 HOH A 126 626 25 HOH HOH . C 3 HOH A 127 627 73 HOH HOH . C 3 HOH A 128 628 137 HOH HOH . C 3 HOH A 129 629 98 HOH HOH . C 3 HOH A 130 630 209 HOH HOH . C 3 HOH A 131 631 3 HOH HOH . C 3 HOH A 132 632 134 HOH HOH . C 3 HOH A 133 633 111 HOH HOH . C 3 HOH A 134 634 90 HOH HOH . C 3 HOH A 135 635 249 HOH HOH . C 3 HOH A 136 636 219 HOH HOH . C 3 HOH A 137 637 196 HOH HOH . C 3 HOH A 138 638 169 HOH HOH . C 3 HOH A 139 639 148 HOH HOH . C 3 HOH A 140 640 81 HOH HOH . C 3 HOH A 141 641 244 HOH HOH . C 3 HOH A 142 642 74 HOH HOH . C 3 HOH A 143 643 43 HOH HOH . C 3 HOH A 144 644 21 HOH HOH . C 3 HOH A 145 645 27 HOH HOH . C 3 HOH A 146 646 173 HOH HOH . C 3 HOH A 147 647 181 HOH HOH . C 3 HOH A 148 648 41 HOH HOH . C 3 HOH A 149 649 22 HOH HOH . C 3 HOH A 150 650 83 HOH HOH . C 3 HOH A 151 651 6 HOH HOH . C 3 HOH A 152 652 206 HOH HOH . C 3 HOH A 153 653 153 HOH HOH . C 3 HOH A 154 654 94 HOH HOH . C 3 HOH A 155 655 230 HOH HOH . C 3 HOH A 156 656 4 HOH HOH . C 3 HOH A 157 657 35 HOH HOH . C 3 HOH A 158 658 143 HOH HOH . C 3 HOH A 159 659 63 HOH HOH . C 3 HOH A 160 660 56 HOH HOH . C 3 HOH A 161 661 72 HOH HOH . C 3 HOH A 162 662 106 HOH HOH . C 3 HOH A 163 663 104 HOH HOH . C 3 HOH A 164 664 248 HOH HOH . C 3 HOH A 165 665 140 HOH HOH . C 3 HOH A 166 666 132 HOH HOH . C 3 HOH A 167 667 18 HOH HOH . C 3 HOH A 168 668 220 HOH HOH . C 3 HOH A 169 669 225 HOH HOH . C 3 HOH A 170 670 117 HOH HOH . C 3 HOH A 171 671 99 HOH HOH . C 3 HOH A 172 672 11 HOH HOH . C 3 HOH A 173 673 124 HOH HOH . C 3 HOH A 174 674 251 HOH HOH . C 3 HOH A 175 675 84 HOH HOH . C 3 HOH A 176 676 224 HOH HOH . C 3 HOH A 177 677 141 HOH HOH . C 3 HOH A 178 678 48 HOH HOH . C 3 HOH A 179 679 80 HOH HOH . C 3 HOH A 180 680 145 HOH HOH . C 3 HOH A 181 681 144 HOH HOH . C 3 HOH A 182 682 186 HOH HOH . C 3 HOH A 183 683 151 HOH HOH . C 3 HOH A 184 684 68 HOH HOH . C 3 HOH A 185 685 13 HOH HOH . C 3 HOH A 186 686 123 HOH HOH . C 3 HOH A 187 687 53 HOH HOH . C 3 HOH A 188 688 179 HOH HOH . C 3 HOH A 189 689 67 HOH HOH . C 3 HOH A 190 690 85 HOH HOH . C 3 HOH A 191 691 216 HOH HOH . C 3 HOH A 192 692 182 HOH HOH . C 3 HOH A 193 693 194 HOH HOH . C 3 HOH A 194 694 61 HOH HOH . C 3 HOH A 195 695 101 HOH HOH . C 3 HOH A 196 696 66 HOH HOH . C 3 HOH A 197 697 183 HOH HOH . C 3 HOH A 198 698 172 HOH HOH . C 3 HOH A 199 699 147 HOH HOH . C 3 HOH A 200 700 212 HOH HOH . C 3 HOH A 201 701 199 HOH HOH . C 3 HOH A 202 702 187 HOH HOH . C 3 HOH A 203 703 195 HOH HOH . C 3 HOH A 204 704 33 HOH HOH . C 3 HOH A 205 705 122 HOH HOH . C 3 HOH A 206 706 159 HOH HOH . C 3 HOH A 207 707 247 HOH HOH . C 3 HOH A 208 708 255 HOH HOH . C 3 HOH A 209 709 242 HOH HOH . C 3 HOH A 210 710 200 HOH HOH . C 3 HOH A 211 711 202 HOH HOH . C 3 HOH A 212 712 201 HOH HOH . C 3 HOH A 213 713 115 HOH HOH . C 3 HOH A 214 714 165 HOH HOH . C 3 HOH A 215 715 257 HOH HOH . C 3 HOH A 216 716 240 HOH HOH . C 3 HOH A 217 717 163 HOH HOH . C 3 HOH A 218 718 213 HOH HOH . C 3 HOH A 219 719 116 HOH HOH . C 3 HOH A 220 720 87 HOH HOH . C 3 HOH A 221 721 197 HOH HOH . C 3 HOH A 222 722 86 HOH HOH . C 3 HOH A 223 723 36 HOH HOH . C 3 HOH A 224 724 17 HOH HOH . C 3 HOH A 225 725 152 HOH HOH . C 3 HOH A 226 726 231 HOH HOH . C 3 HOH A 227 727 193 HOH HOH . C 3 HOH A 228 728 190 HOH HOH . C 3 HOH A 229 729 217 HOH HOH . C 3 HOH A 230 730 203 HOH HOH . C 3 HOH A 231 731 243 HOH HOH . C 3 HOH A 232 732 158 HOH HOH . C 3 HOH A 233 733 246 HOH HOH . C 3 HOH A 234 734 168 HOH HOH . C 3 HOH A 235 735 207 HOH HOH . C 3 HOH A 236 736 226 HOH HOH . C 3 HOH A 237 737 157 HOH HOH . C 3 HOH A 238 738 149 HOH HOH . C 3 HOH A 239 739 57 HOH HOH . C 3 HOH A 240 740 245 HOH HOH . C 3 HOH A 241 741 28 HOH HOH . C 3 HOH A 242 742 170 HOH HOH . C 3 HOH A 243 743 235 HOH HOH . C 3 HOH A 244 744 156 HOH HOH . C 3 HOH A 245 745 142 HOH HOH . C 3 HOH A 246 746 71 HOH HOH . C 3 HOH A 247 747 121 HOH HOH . C 3 HOH A 248 748 189 HOH HOH . C 3 HOH A 249 749 192 HOH HOH . C 3 HOH A 250 750 232 HOH HOH . C 3 HOH A 251 751 239 HOH HOH . C 3 HOH A 252 752 62 HOH HOH . C 3 HOH A 253 753 131 HOH HOH . C 3 HOH A 254 754 198 HOH HOH . C 3 HOH A 255 755 241 HOH HOH . C 3 HOH A 256 756 250 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 DTT . . . B 2 -4.858 -27.386 -28.881 1 52.76 ? S1 DTT 401 A 1 HETATM 2 C C1 DTT . . . B 2 -3.637 -28.031 -27.699 1 77.72 ? C1 DTT 401 A 1 HETATM 3 C C2 DTT . . . B 2 -2.216 -27.668 -28.104 1 80.08 ? C2 DTT 401 A 1 HETATM 4 O O2 DTT . . . B 2 -1.975 -28.154 -29.408 1 83.94 ? O2 DTT 401 A 1 HETATM 5 C C3 DTT . . . B 2 -1.19 -28.27 -27.156 1 79.15 ? C3 DTT 401 A 1 HETATM 6 O O3 DTT . . . B 2 -1.693 -28.237 -25.844 1 76.41 ? O3 DTT 401 A 1 HETATM 7 C C4 DTT . . . B 2 -0.935 -29.72 -27.53 1 80.13 ? C4 DTT 401 A 1 HETATM 8 S S4 DTT . . . B 2 0.754 -30.29 -27.221 0.5 93.65 ? S4 DTT 401 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #