data_4U9S # _model_server_result.job_id IVO3tbjhdvd167SmXyOQHA _model_server_result.datetime_utc '2024-11-21 13:57:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 4U9S # _exptl.entry_id 4U9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.73 _cell.angle_gamma 90 _cell.entry_id 4U9S _cell.length_a 46.69 _cell.length_b 41.73 _cell.length_c 61.41 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details Monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG1 _struct_conn.ptnr1_label_comp_id THR _struct_conn.ptnr1_label_seq_id 187 _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id THR _struct_conn.ptnr1_auth_seq_id 225 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id P _struct_conn.ptnr2_label_comp_id FMN _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id FMN _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.597 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 170 n n C1 C2 GOL sing 171 n n C1 H11 GOL sing 172 n n C1 H12 GOL sing 173 n n O1 HO1 GOL sing 174 n n C2 O2 GOL sing 175 n n C2 C3 GOL sing 176 n n C2 H2 GOL sing 177 n n O2 HO2 GOL sing 178 n n C3 O3 GOL sing 179 n n C3 H31 GOL sing 180 n n C3 H32 GOL sing 181 n n O3 HO3 GOL sing 182 n n # _atom_sites.entry_id 4U9S _atom_sites.fract_transf_matrix[1][1] 0.021418 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005235 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023964 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016763 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN C 1 301 1000 FMN FMN . C 3 GOL C 1 302 1 GOL GOL . D 4 BR C 1 303 1 BR BR . E 5 HOH C 1 401 158 HOH HOH . E 5 HOH C 2 402 136 HOH HOH . E 5 HOH C 3 403 162 HOH HOH . E 5 HOH C 4 404 165 HOH HOH . E 5 HOH C 5 405 120 HOH HOH . E 5 HOH C 6 406 157 HOH HOH . E 5 HOH C 7 407 140 HOH HOH . E 5 HOH C 8 408 77 HOH HOH . E 5 HOH C 9 409 160 HOH HOH . E 5 HOH C 10 410 110 HOH HOH . E 5 HOH C 11 411 33 HOH HOH . E 5 HOH C 12 412 76 HOH HOH . E 5 HOH C 13 413 78 HOH HOH . E 5 HOH C 14 414 67 HOH HOH . E 5 HOH C 15 415 122 HOH HOH . E 5 HOH C 16 416 32 HOH HOH . E 5 HOH C 17 417 25 HOH HOH . E 5 HOH C 18 418 150 HOH HOH . E 5 HOH C 19 419 83 HOH HOH . E 5 HOH C 20 420 61 HOH HOH . E 5 HOH C 21 421 101 HOH HOH . E 5 HOH C 22 422 106 HOH HOH . E 5 HOH C 23 423 135 HOH HOH . E 5 HOH C 24 424 37 HOH HOH . E 5 HOH C 25 425 149 HOH HOH . E 5 HOH C 26 426 17 HOH HOH . E 5 HOH C 27 427 152 HOH HOH . E 5 HOH C 28 428 119 HOH HOH . E 5 HOH C 29 429 6 HOH HOH . E 5 HOH C 30 430 92 HOH HOH . E 5 HOH C 31 431 21 HOH HOH . E 5 HOH C 32 432 71 HOH HOH . E 5 HOH C 33 433 1 HOH HOH . E 5 HOH C 34 434 28 HOH HOH . E 5 HOH C 35 435 151 HOH HOH . E 5 HOH C 36 436 57 HOH HOH . E 5 HOH C 37 437 2 HOH HOH . E 5 HOH C 38 438 45 HOH HOH . E 5 HOH C 39 439 8 HOH HOH . E 5 HOH C 40 440 24 HOH HOH . E 5 HOH C 41 441 131 HOH HOH . E 5 HOH C 42 442 29 HOH HOH . E 5 HOH C 43 443 115 HOH HOH . E 5 HOH C 44 444 40 HOH HOH . E 5 HOH C 45 445 56 HOH HOH . E 5 HOH C 46 446 5 HOH HOH . E 5 HOH C 47 447 15 HOH HOH . E 5 HOH C 48 448 65 HOH HOH . E 5 HOH C 49 449 104 HOH HOH . E 5 HOH C 50 450 9 HOH HOH . E 5 HOH C 51 451 16 HOH HOH . E 5 HOH C 52 452 90 HOH HOH . E 5 HOH C 53 453 130 HOH HOH . E 5 HOH C 54 454 74 HOH HOH . E 5 HOH C 55 455 11 HOH HOH . E 5 HOH C 56 456 64 HOH HOH . E 5 HOH C 57 457 53 HOH HOH . E 5 HOH C 58 458 49 HOH HOH . E 5 HOH C 59 459 4 HOH HOH . E 5 HOH C 60 460 59 HOH HOH . E 5 HOH C 61 461 20 HOH HOH . E 5 HOH C 62 462 102 HOH HOH . E 5 HOH C 63 463 121 HOH HOH . E 5 HOH C 64 464 163 HOH HOH . E 5 HOH C 65 465 99 HOH HOH . E 5 HOH C 66 466 82 HOH HOH . E 5 HOH C 67 467 70 HOH HOH . E 5 HOH C 68 468 13 HOH HOH . E 5 HOH C 69 469 93 HOH HOH . E 5 HOH C 70 470 44 HOH HOH . E 5 HOH C 71 471 171 HOH HOH . E 5 HOH C 72 472 89 HOH HOH . E 5 HOH C 73 473 19 HOH HOH . E 5 HOH C 74 474 79 HOH HOH . E 5 HOH C 75 475 12 HOH HOH . E 5 HOH C 76 476 69 HOH HOH . E 5 HOH C 77 477 62 HOH HOH . E 5 HOH C 78 478 18 HOH HOH . E 5 HOH C 79 479 88 HOH HOH . E 5 HOH C 80 480 124 HOH HOH . E 5 HOH C 81 481 148 HOH HOH . E 5 HOH C 82 482 138 HOH HOH . E 5 HOH C 83 483 107 HOH HOH . E 5 HOH C 84 484 51 HOH HOH . E 5 HOH C 85 485 46 HOH HOH . E 5 HOH C 86 486 123 HOH HOH . E 5 HOH C 87 487 118 HOH HOH . E 5 HOH C 88 488 91 HOH HOH . E 5 HOH C 89 489 42 HOH HOH . E 5 HOH C 90 490 43 HOH HOH . E 5 HOH C 91 491 114 HOH HOH . E 5 HOH C 92 492 36 HOH HOH . E 5 HOH C 93 493 98 HOH HOH . E 5 HOH C 94 494 14 HOH HOH . E 5 HOH C 95 495 39 HOH HOH . E 5 HOH C 96 496 85 HOH HOH . E 5 HOH C 97 497 35 HOH HOH . E 5 HOH C 98 498 23 HOH HOH . E 5 HOH C 99 499 75 HOH HOH . E 5 HOH C 100 500 97 HOH HOH . E 5 HOH C 101 501 87 HOH HOH . E 5 HOH C 102 502 47 HOH HOH . E 5 HOH C 103 503 52 HOH HOH . E 5 HOH C 104 504 94 HOH HOH . E 5 HOH C 105 505 54 HOH HOH . E 5 HOH C 106 506 128 HOH HOH . E 5 HOH C 107 507 108 HOH HOH . E 5 HOH C 108 508 27 HOH HOH . E 5 HOH C 109 509 58 HOH HOH . E 5 HOH C 110 510 55 HOH HOH . E 5 HOH C 111 511 7 HOH HOH . E 5 HOH C 112 512 50 HOH HOH . E 5 HOH C 113 513 96 HOH HOH . E 5 HOH C 114 514 111 HOH HOH . E 5 HOH C 115 515 129 HOH HOH . E 5 HOH C 116 516 95 HOH HOH . E 5 HOH C 117 517 66 HOH HOH . E 5 HOH C 118 518 63 HOH HOH . E 5 HOH C 119 519 100 HOH HOH . E 5 HOH C 120 520 31 HOH HOH . E 5 HOH C 121 521 109 HOH HOH . E 5 HOH C 122 522 139 HOH HOH . E 5 HOH C 123 523 113 HOH HOH . E 5 HOH C 124 524 117 HOH HOH . E 5 HOH C 125 525 170 HOH HOH . E 5 HOH C 126 526 72 HOH HOH . E 5 HOH C 127 527 127 HOH HOH . E 5 HOH C 128 528 134 HOH HOH . E 5 HOH C 129 529 73 HOH HOH . E 5 HOH C 130 530 34 HOH HOH . E 5 HOH C 131 531 137 HOH HOH . E 5 HOH C 132 532 81 HOH HOH . E 5 HOH C 133 533 30 HOH HOH . E 5 HOH C 134 534 103 HOH HOH . E 5 HOH C 135 535 112 HOH HOH . E 5 HOH C 136 536 48 HOH HOH . E 5 HOH C 137 537 41 HOH HOH . E 5 HOH C 138 538 125 HOH HOH . E 5 HOH C 139 539 60 HOH HOH . E 5 HOH C 140 540 133 HOH HOH . E 5 HOH C 141 541 142 HOH HOH . E 5 HOH C 142 542 132 HOH HOH . E 5 HOH C 143 543 167 HOH HOH . E 5 HOH C 144 544 3 HOH HOH . E 5 HOH C 145 545 10 HOH HOH . E 5 HOH C 146 546 153 HOH HOH . E 5 HOH C 147 547 26 HOH HOH . E 5 HOH C 148 548 145 HOH HOH . E 5 HOH C 149 549 80 HOH HOH . E 5 HOH C 150 550 161 HOH HOH . E 5 HOH C 151 551 38 HOH HOH . E 5 HOH C 152 552 144 HOH HOH . E 5 HOH C 153 553 68 HOH HOH . E 5 HOH C 154 554 166 HOH HOH . E 5 HOH C 155 555 22 HOH HOH . E 5 HOH C 156 556 156 HOH HOH . E 5 HOH C 157 557 105 HOH HOH . E 5 HOH C 158 558 164 HOH HOH . E 5 HOH C 159 559 168 HOH HOH . E 5 HOH C 160 560 116 HOH HOH . E 5 HOH C 161 561 143 HOH HOH . E 5 HOH C 162 562 86 HOH HOH . E 5 HOH C 163 563 84 HOH HOH . E 5 HOH C 164 564 141 HOH HOH . E 5 HOH C 165 565 169 HOH HOH . E 5 HOH C 166 566 159 HOH HOH . E 5 HOH C 167 567 155 HOH HOH . E 5 HOH C 168 568 147 HOH HOH . E 5 HOH C 169 569 154 HOH HOH . E 5 HOH C 170 570 146 HOH HOH . E 5 HOH C 171 571 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 15.74 19.88 49.355 1 87.26 ? C1 GOL 302 C 1 HETATM 2 O O1 GOL . . . C 3 14.767 19.966 48.344 1 88.69 ? O1 GOL 302 C 1 HETATM 3 C C2 GOL . . . C 3 15.065 19.623 50.695 1 86.51 ? C2 GOL 302 C 1 HETATM 4 O O2 GOL . . . C 3 14.234 20.715 51.012 1 84.85 ? O2 GOL 302 C 1 HETATM 5 C C3 GOL . . . C 3 14.264 18.323 50.667 1 87.88 ? C3 GOL 302 C 1 HETATM 6 O O3 GOL . . . C 3 12.889 18.599 50.771 1 89.16 ? O3 GOL 302 C 1 HETATM 7 H H11 GOL . . . C 3 16.433 19.069 49.13 1 104.71 ? H11 GOL 302 C 1 HETATM 8 H H12 GOL . . . C 3 16.307 20.809 49.401 1 104.71 ? H12 GOL 302 C 1 HETATM 9 H HO1 GOL . . . C 3 15.199 20.197 47.495 1 106.42 ? HO1 GOL 302 C 1 HETATM 10 H H2 GOL . . . C 3 15.841 19.528 51.454 1 103.81 ? H2 GOL 302 C 1 HETATM 11 H HO2 GOL . . . C 3 13.519 20.786 50.345 1 101.82 ? HO2 GOL 302 C 1 HETATM 12 H H31 GOL . . . C 3 14.462 17.791 49.737 1 105.45 ? H31 GOL 302 C 1 HETATM 13 H H32 GOL . . . C 3 14.573 17.685 51.495 1 105.45 ? H32 GOL 302 C 1 HETATM 14 H HO3 GOL . . . C 3 12.388 17.757 50.796 1 106.99 ? HO3 GOL 302 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #