data_4UBF
#
_model_server_result.job_id            PYduZQ7YlDOrBD-SQ8rTrQ 
_model_server_result.datetime_utc      '2024-11-14 19:34:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ubf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":603}' 
#
_entry.id    4UBF 
#
_exptl.entry_id    4UBF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.84 
_cell.angle_gamma         90 
_cell.entry_id            4UBF 
_cell.length_a            46.306 
_cell.length_b            245.644 
_cell.length_c            79.399 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4UBF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,Q,R,U 1 1 
C,D,L,M,N,O,P,S,T 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 N N N 
? 3 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 149 A THR 355 1_555 F MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? 
metalc ? metalc2 F MG MG . A MG 601 1_555 G O1B ADP . A ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc3 F MG MG . A MG 601 1_555 Q O HOH . A HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc4 H MG MG . A MG 603 1_555 Q O HOH . A HOH 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? 
metalc ? metalc5 H MG MG . A MG 603 1_555 Q O HOH . A HOH 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc6 B OG1 THR 149 B THR 355 1_555 K MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? 
metalc ? metalc7 I O1B ADP . B ADP 601 1_555 K MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc8 I O2B ADP . B ADP 601 1_555 K MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc9 I O3A ADP . B ADP 601 1_555 K MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? 
metalc ? metalc10 J MG MG . B MG 602 1_555 R O HOH . B HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? 
metalc ? metalc11 K MG MG . B MG 603 1_555 R O HOH . B HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
metalc ? metalc12 K MG MG . B MG 603 1_555 R O HOH . B HOH 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.923 ? 
metalc ? metalc13 L MG MG . C MG 601 1_555 S O HOH . C HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc14 O MG MG . D MG 601 1_555 P O1B ADP . D ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc15 O MG MG . D MG 601 1_555 P O2B ADP . D ADP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? 
metalc ? metalc16 O MG MG . D MG 601 1_555 T O HOH . D HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc17 O MG MG . D MG 601 1_555 T O HOH . D HOH 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
metalc ? metalc18 O MG MG . D MG 601 1_555 T O HOH . D HOH 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.969 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4UBF 
_atom_sites.fract_transf_matrix[1][1]    0.021595 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002207 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004071 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01266 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 3 MG A 1 601 602 MG MG . 
G 4 ADP A 1 602 601 ADP ADP . 
H 3 MG A 1 603 2 MG MG . 
I 4 ADP B 1 601 601 ADP ADP . 
J 3 MG B 1 602 1 MG MG . 
K 3 MG B 1 603 4 MG MG . 
L 3 MG C 1 601 602 MG MG . 
M 4 ADP C 1 602 601 ADP ADP . 
N 3 MG C 1 603 3 MG MG . 
O 3 MG D 1 601 602 MG MG . 
P 4 ADP D 1 602 601 ADP ADP . 
Q 5 HOH A 1 701 6 HOH HOH . 
Q 5 HOH A 2 702 49 HOH HOH . 
Q 5 HOH A 3 703 104 HOH HOH . 
Q 5 HOH A 4 704 84 HOH HOH . 
Q 5 HOH A 5 705 109 HOH HOH . 
Q 5 HOH A 6 706 71 HOH HOH . 
Q 5 HOH A 7 707 66 HOH HOH . 
Q 5 HOH A 8 708 15 HOH HOH . 
Q 5 HOH A 9 709 79 HOH HOH . 
Q 5 HOH A 10 710 77 HOH HOH . 
Q 5 HOH A 11 711 42 HOH HOH . 
Q 5 HOH A 12 712 80 HOH HOH . 
Q 5 HOH A 13 713 82 HOH HOH . 
Q 5 HOH A 14 714 16 HOH HOH . 
R 5 HOH B 1 701 92 HOH HOH . 
R 5 HOH B 2 702 89 HOH HOH . 
R 5 HOH B 3 703 54 HOH HOH . 
R 5 HOH B 4 704 10 HOH HOH . 
R 5 HOH B 5 705 105 HOH HOH . 
R 5 HOH B 6 706 26 HOH HOH . 
R 5 HOH B 7 707 29 HOH HOH . 
R 5 HOH B 8 708 5 HOH HOH . 
R 5 HOH B 9 709 81 HOH HOH . 
R 5 HOH B 10 710 60 HOH HOH . 
R 5 HOH B 11 711 12 HOH HOH . 
R 5 HOH B 12 712 23 HOH HOH . 
R 5 HOH B 13 713 88 HOH HOH . 
R 5 HOH B 14 714 87 HOH HOH . 
R 5 HOH B 15 715 106 HOH HOH . 
R 5 HOH B 16 716 86 HOH HOH . 
R 5 HOH B 17 717 3 HOH HOH . 
R 5 HOH B 18 718 85 HOH HOH . 
R 5 HOH B 19 719 111 HOH HOH . 
R 5 HOH B 20 720 9 HOH HOH . 
S 5 HOH C 1 701 21 HOH HOH . 
S 5 HOH C 2 702 40 HOH HOH . 
S 5 HOH C 3 703 28 HOH HOH . 
S 5 HOH C 4 704 41 HOH HOH . 
S 5 HOH C 5 705 38 HOH HOH . 
S 5 HOH C 6 706 39 HOH HOH . 
S 5 HOH C 7 707 75 HOH HOH . 
S 5 HOH C 8 708 73 HOH HOH . 
S 5 HOH C 9 709 95 HOH HOH . 
S 5 HOH C 10 710 97 HOH HOH . 
S 5 HOH C 11 711 27 HOH HOH . 
S 5 HOH C 12 712 61 HOH HOH . 
S 5 HOH C 13 713 93 HOH HOH . 
S 5 HOH C 14 714 94 HOH HOH . 
S 5 HOH C 15 715 51 HOH HOH . 
S 5 HOH C 16 716 48 HOH HOH . 
S 5 HOH C 17 717 112 HOH HOH . 
T 5 HOH D 1 701 13 HOH HOH . 
T 5 HOH D 2 702 44 HOH HOH . 
T 5 HOH D 3 703 102 HOH HOH . 
T 5 HOH D 4 704 22 HOH HOH . 
T 5 HOH D 5 705 101 HOH HOH . 
T 5 HOH D 6 706 45 HOH HOH . 
T 5 HOH D 7 707 62 HOH HOH . 
T 5 HOH D 8 708 53 HOH HOH . 
T 5 HOH D 9 709 69 HOH HOH . 
T 5 HOH D 10 710 14 HOH HOH . 
T 5 HOH D 11 711 100 HOH HOH . 
T 5 HOH D 12 712 8 HOH HOH . 
T 5 HOH D 13 713 68 HOH HOH . 
T 5 HOH D 14 714 59 HOH HOH . 
T 5 HOH D 15 715 17 HOH HOH . 
T 5 HOH D 16 716 43 HOH HOH . 
U 5 HOH P 1 801 110 HOH HOH . 
U 5 HOH P 2 802 103 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         N 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -1.147 
_atom_site.Cartn_y               -27.886 
_atom_site.Cartn_z               29.365 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        78.64 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           603 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           348 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#