data_4UBO # _model_server_result.job_id 5Wc_Kge9PNVMDlQ2DtHiag _model_server_result.datetime_utc '2024-11-18 16:36:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ubo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 4UBO # _exptl.entry_id 4UBO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.102 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIETHYL HYDROGEN PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4UBO _cell.length_a 49.461 _cell.length_b 101.589 _cell.length_c 223.505 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UBO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 218 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 218 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id P1 _struct_conn.ptnr2_label_comp_id DPF _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id DPF _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.519 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H11 O4 P' _chem_comp.formula_weight 154.102 _chem_comp.id DPF _chem_comp.mon_nstd_flag . _chem_comp.name 'DIETHYL HYDROGEN PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 P1 DPF sing 83 n n O4 HO4 DPF sing 84 n n P1 O3 DPF sing 85 n n P1 O2 DPF doub 86 n n P1 O1 DPF sing 87 n n O3 C1 DPF sing 88 n n C1 C4 DPF sing 89 n n C1 H11 DPF sing 90 n n C1 H12 DPF sing 91 n n C4 H41 DPF sing 92 n n C4 H42 DPF sing 93 n n C4 H43 DPF sing 94 n n O1 C2 DPF sing 95 n n C2 C3 DPF sing 96 n n C2 H21 DPF sing 97 n n C2 H22 DPF sing 98 n n C3 H31 DPF sing 99 n n C3 H32 DPF sing 100 n n C3 H33 DPF sing 101 n n # _atom_sites.entry_id 4UBO _atom_sites.fract_transf_matrix[1][1] 0.020218 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009844 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004474 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DPF A 1 601 601 DPF DPF . C 3 HOH A 1 701 326 HOH HOH . C 3 HOH A 2 702 260 HOH HOH . C 3 HOH A 3 703 32 HOH HOH . C 3 HOH A 4 704 252 HOH HOH . C 3 HOH A 5 705 29 HOH HOH . C 3 HOH A 6 706 385 HOH HOH . C 3 HOH A 7 707 329 HOH HOH . C 3 HOH A 8 708 219 HOH HOH . C 3 HOH A 9 709 186 HOH HOH . C 3 HOH A 10 710 213 HOH HOH . C 3 HOH A 11 711 257 HOH HOH . C 3 HOH A 12 712 249 HOH HOH . C 3 HOH A 13 713 349 HOH HOH . C 3 HOH A 14 714 181 HOH HOH . C 3 HOH A 15 715 24 HOH HOH . C 3 HOH A 16 716 48 HOH HOH . C 3 HOH A 17 717 380 HOH HOH . C 3 HOH A 18 718 7 HOH HOH . C 3 HOH A 19 719 93 HOH HOH . C 3 HOH A 20 720 289 HOH HOH . C 3 HOH A 21 721 14 HOH HOH . C 3 HOH A 22 722 102 HOH HOH . C 3 HOH A 23 723 378 HOH HOH . C 3 HOH A 24 724 238 HOH HOH . C 3 HOH A 25 725 221 HOH HOH . C 3 HOH A 26 726 268 HOH HOH . C 3 HOH A 27 727 207 HOH HOH . C 3 HOH A 28 728 40 HOH HOH . C 3 HOH A 29 729 159 HOH HOH . C 3 HOH A 30 730 97 HOH HOH . C 3 HOH A 31 731 396 HOH HOH . C 3 HOH A 32 732 407 HOH HOH . C 3 HOH A 33 733 191 HOH HOH . C 3 HOH A 34 734 270 HOH HOH . C 3 HOH A 35 735 306 HOH HOH . C 3 HOH A 36 736 403 HOH HOH . C 3 HOH A 37 737 129 HOH HOH . C 3 HOH A 38 738 276 HOH HOH . C 3 HOH A 39 739 70 HOH HOH . C 3 HOH A 40 740 2 HOH HOH . C 3 HOH A 41 741 3 HOH HOH . C 3 HOH A 42 742 4 HOH HOH . C 3 HOH A 43 743 5 HOH HOH . C 3 HOH A 44 744 6 HOH HOH . C 3 HOH A 45 745 8 HOH HOH . C 3 HOH A 46 746 9 HOH HOH . C 3 HOH A 47 747 10 HOH HOH . C 3 HOH A 48 748 11 HOH HOH . C 3 HOH A 49 749 12 HOH HOH . C 3 HOH A 50 750 13 HOH HOH . C 3 HOH A 51 751 15 HOH HOH . C 3 HOH A 52 752 16 HOH HOH . C 3 HOH A 53 753 17 HOH HOH . C 3 HOH A 54 754 18 HOH HOH . C 3 HOH A 55 755 19 HOH HOH . C 3 HOH A 56 756 20 HOH HOH . C 3 HOH A 57 757 21 HOH HOH . C 3 HOH A 58 758 23 HOH HOH . C 3 HOH A 59 759 26 HOH HOH . C 3 HOH A 60 760 27 HOH HOH . C 3 HOH A 61 761 28 HOH HOH . C 3 HOH A 62 762 30 HOH HOH . C 3 HOH A 63 763 31 HOH HOH . C 3 HOH A 64 764 33 HOH HOH . C 3 HOH A 65 765 35 HOH HOH . C 3 HOH A 66 766 36 HOH HOH . C 3 HOH A 67 767 37 HOH HOH . C 3 HOH A 68 768 38 HOH HOH . C 3 HOH A 69 769 39 HOH HOH . C 3 HOH A 70 770 42 HOH HOH . C 3 HOH A 71 771 43 HOH HOH . C 3 HOH A 72 772 45 HOH HOH . C 3 HOH A 73 773 46 HOH HOH . C 3 HOH A 74 774 49 HOH HOH . C 3 HOH A 75 775 50 HOH HOH . C 3 HOH A 76 776 51 HOH HOH . C 3 HOH A 77 777 53 HOH HOH . C 3 HOH A 78 778 55 HOH HOH . C 3 HOH A 79 779 56 HOH HOH . C 3 HOH A 80 780 57 HOH HOH . C 3 HOH A 81 781 60 HOH HOH . C 3 HOH A 82 782 61 HOH HOH . C 3 HOH A 83 783 62 HOH HOH . C 3 HOH A 84 784 64 HOH HOH . C 3 HOH A 85 785 65 HOH HOH . C 3 HOH A 86 786 66 HOH HOH . C 3 HOH A 87 787 67 HOH HOH . C 3 HOH A 88 788 68 HOH HOH . C 3 HOH A 89 789 69 HOH HOH . C 3 HOH A 90 790 71 HOH HOH . C 3 HOH A 91 791 74 HOH HOH . C 3 HOH A 92 792 76 HOH HOH . C 3 HOH A 93 793 77 HOH HOH . C 3 HOH A 94 794 78 HOH HOH . C 3 HOH A 95 795 79 HOH HOH . C 3 HOH A 96 796 80 HOH HOH . C 3 HOH A 97 797 81 HOH HOH . C 3 HOH A 98 798 82 HOH HOH . C 3 HOH A 99 799 83 HOH HOH . C 3 HOH A 100 800 84 HOH HOH . C 3 HOH A 101 801 85 HOH HOH . C 3 HOH A 102 802 86 HOH HOH . C 3 HOH A 103 803 88 HOH HOH . C 3 HOH A 104 804 90 HOH HOH . C 3 HOH A 105 805 95 HOH HOH . C 3 HOH A 106 806 99 HOH HOH . C 3 HOH A 107 807 103 HOH HOH . C 3 HOH A 108 808 104 HOH HOH . C 3 HOH A 109 809 106 HOH HOH . C 3 HOH A 110 810 107 HOH HOH . C 3 HOH A 111 811 110 HOH HOH . C 3 HOH A 112 812 112 HOH HOH . C 3 HOH A 113 813 115 HOH HOH . C 3 HOH A 114 814 117 HOH HOH . C 3 HOH A 115 815 118 HOH HOH . C 3 HOH A 116 816 119 HOH HOH . C 3 HOH A 117 817 120 HOH HOH . C 3 HOH A 118 818 121 HOH HOH . C 3 HOH A 119 819 123 HOH HOH . C 3 HOH A 120 820 124 HOH HOH . C 3 HOH A 121 821 126 HOH HOH . C 3 HOH A 122 822 128 HOH HOH . C 3 HOH A 123 823 130 HOH HOH . C 3 HOH A 124 824 131 HOH HOH . C 3 HOH A 125 825 132 HOH HOH . C 3 HOH A 126 826 133 HOH HOH . C 3 HOH A 127 827 134 HOH HOH . C 3 HOH A 128 828 136 HOH HOH . C 3 HOH A 129 829 137 HOH HOH . C 3 HOH A 130 830 138 HOH HOH . C 3 HOH A 131 831 140 HOH HOH . C 3 HOH A 132 832 141 HOH HOH . C 3 HOH A 133 833 142 HOH HOH . C 3 HOH A 134 834 143 HOH HOH . C 3 HOH A 135 835 144 HOH HOH . C 3 HOH A 136 836 145 HOH HOH . C 3 HOH A 137 837 146 HOH HOH . C 3 HOH A 138 838 151 HOH HOH . C 3 HOH A 139 839 156 HOH HOH . C 3 HOH A 140 840 157 HOH HOH . C 3 HOH A 141 841 158 HOH HOH . C 3 HOH A 142 842 169 HOH HOH . C 3 HOH A 143 843 170 HOH HOH . C 3 HOH A 144 844 182 HOH HOH . C 3 HOH A 145 845 183 HOH HOH . C 3 HOH A 146 846 184 HOH HOH . C 3 HOH A 147 847 188 HOH HOH . C 3 HOH A 148 848 189 HOH HOH . C 3 HOH A 149 849 193 HOH HOH . C 3 HOH A 150 850 198 HOH HOH . C 3 HOH A 151 851 199 HOH HOH . C 3 HOH A 152 852 201 HOH HOH . C 3 HOH A 153 853 210 HOH HOH . C 3 HOH A 154 854 212 HOH HOH . C 3 HOH A 155 855 215 HOH HOH . C 3 HOH A 156 856 220 HOH HOH . C 3 HOH A 157 857 235 HOH HOH . C 3 HOH A 158 858 250 HOH HOH . C 3 HOH A 159 859 254 HOH HOH . C 3 HOH A 160 860 255 HOH HOH . C 3 HOH A 161 861 256 HOH HOH . C 3 HOH A 162 862 263 HOH HOH . C 3 HOH A 163 863 265 HOH HOH . C 3 HOH A 164 864 266 HOH HOH . C 3 HOH A 165 865 269 HOH HOH . C 3 HOH A 166 866 273 HOH HOH . C 3 HOH A 167 867 274 HOH HOH . C 3 HOH A 168 868 279 HOH HOH . C 3 HOH A 169 869 281 HOH HOH . C 3 HOH A 170 870 282 HOH HOH . C 3 HOH A 171 871 283 HOH HOH . C 3 HOH A 172 872 286 HOH HOH . C 3 HOH A 173 873 287 HOH HOH . C 3 HOH A 174 874 291 HOH HOH . C 3 HOH A 175 875 294 HOH HOH . C 3 HOH A 176 876 295 HOH HOH . C 3 HOH A 177 877 297 HOH HOH . C 3 HOH A 178 878 304 HOH HOH . C 3 HOH A 179 879 305 HOH HOH . C 3 HOH A 180 880 307 HOH HOH . C 3 HOH A 181 881 309 HOH HOH . C 3 HOH A 182 882 311 HOH HOH . C 3 HOH A 183 883 314 HOH HOH . C 3 HOH A 184 884 317 HOH HOH . C 3 HOH A 185 885 324 HOH HOH . C 3 HOH A 186 886 327 HOH HOH . C 3 HOH A 187 887 333 HOH HOH . C 3 HOH A 188 888 336 HOH HOH . C 3 HOH A 189 889 345 HOH HOH . C 3 HOH A 190 890 346 HOH HOH . C 3 HOH A 191 891 351 HOH HOH . C 3 HOH A 192 892 352 HOH HOH . C 3 HOH A 193 893 359 HOH HOH . C 3 HOH A 194 894 379 HOH HOH . C 3 HOH A 195 895 381 HOH HOH . C 3 HOH A 196 896 384 HOH HOH . C 3 HOH A 197 897 394 HOH HOH . C 3 HOH A 198 898 398 HOH HOH . C 3 HOH A 199 899 400 HOH HOH . C 3 HOH A 200 900 402 HOH HOH . C 3 HOH A 201 901 404 HOH HOH . C 3 HOH A 202 902 405 HOH HOH . C 3 HOH A 203 903 406 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 DPF . . . B 2 19.077 -8.24 23.048 1 20.64 ? O4 DPF 601 A 1 HETATM 2 P P1 DPF . . . B 2 17.708 -8.842 22.856 1 32.25 ? P1 DPF 601 A 1 HETATM 3 O O3 DPF . . . B 2 17.392 -8.686 21.236 1 32.73 ? O3 DPF 601 A 1 HETATM 4 C C1 DPF . . . B 2 17.753 -9.688 20.377 1 30.39 ? C1 DPF 601 A 1 HETATM 5 C C4 DPF . . . B 2 16.69 -9.782 19.311 1 29.47 ? C4 DPF 601 A 1 HETATM 6 O O1 DPF . . . B 2 16.697 -7.703 23.498 1 33.89 ? O1 DPF 601 A 1 HETATM 7 C C2 DPF . . . B 2 16.209 -7.905 24.762 1 34.96 ? C2 DPF 601 A 1 HETATM 8 C C3 DPF . . . B 2 14.803 -8.412 24.615 1 39.65 ? C3 DPF 601 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #