data_4UFC # _model_server_result.job_id gufn-7FTkIpkbbeeh-5kmg _model_server_result.datetime_utc '2024-11-05 00:33:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ufc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1810}' # _entry.id 4UFC # _exptl.entry_id 4UFC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-L-galactopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4UFC _cell.length_a 53.692 _cell.length_b 179.117 _cell.length_c 205.181 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UFC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F,G,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 42 A SER 42 1_555 C CA CA . A CA 1808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc2 A OE1 GLU 62 A GLU 62 1_555 C CA CA . A CA 1808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc3 A O SER 343 A SER 343 1_555 C CA CA . A CA 1808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc4 A O GLN 349 A GLN 349 1_555 C CA CA . A CA 1808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc5 A OE2 GLU 594 A GLU 594 1_555 F CA CA . B CA 1808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc6 B O SER 42 B SER 42 1_555 G CA CA . B CA 1809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? metalc ? metalc7 B OE1 GLU 62 B GLU 62 1_555 G CA CA . B CA 1809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.919 ? metalc ? metalc8 B O SER 343 B SER 343 1_555 G CA CA . B CA 1809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc9 B O GLN 349 B GLN 349 1_555 G CA CA . B CA 1809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc10 B OE1 GLU 702 B GLU 702 1_555 F CA CA . B CA 1808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc11 B OE2 GLU 702 B GLU 702 1_555 F CA CA . B CA 1808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc12 B OE1 GLU 703 B GLU 703 1_555 F CA CA . B CA 1808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GIV _chem_comp.mon_nstd_flag . _chem_comp.name beta-L-galactopyranose _chem_comp.type 'l-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-L-galactose;L-galactose;galactose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GIV sing 93 n n C1 O1 GIV sing 94 n n C1 O5 GIV sing 95 n n C2 C3 GIV sing 96 n n C2 O2 GIV sing 97 n n C3 C4 GIV sing 98 n n C3 O3 GIV sing 99 n n C4 C5 GIV sing 100 n n C4 O4 GIV sing 101 n n C5 C6 GIV sing 102 n n C5 O5 GIV sing 103 n n C6 O6 GIV sing 104 n n C1 H1 GIV sing 105 n n C2 H2 GIV sing 106 n n O1 HO1 GIV sing 107 n n C3 H3 GIV sing 108 n n O2 HO2 GIV sing 109 n n C4 H4 GIV sing 110 n n O3 HO3 GIV sing 111 n n C5 H5 GIV sing 112 n n O4 HO4 GIV sing 113 n n C6 H61 GIV sing 114 n n C6 H62 GIV sing 115 n n O6 HO6 GIV sing 116 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GIV LGalpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GIV b-L-galactopyranose 'COMMON NAME' GMML 1 GIV b-L-Galp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GIV Gal 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 4UFC _atom_sites.fract_transf_matrix[1][1] 0.018625 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005583 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004874 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 1808 1808 CA CA . D 3 GIV A 1 1809 1809 GIV GIV . E 4 CAC A 1 1810 1810 CAC CAC . F 2 CA B 1 1808 1808 CA CA . G 2 CA B 1 1809 1809 CA CA . H 3 GIV B 1 1810 1810 GIV GIV . I 4 CAC B 1 1811 1811 CAC CAC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GIV . . . H 3 -3.831 132.004 47.39 1 29.73 ? C1 GIV 1810 B 1 HETATM 2 C C2 GIV . . . H 3 -4.975 132.953 46.927 1 31.43 ? C2 GIV 1810 B 1 HETATM 3 C C3 GIV . . . H 3 -5.226 134.193 47.812 1 30.48 ? C3 GIV 1810 B 1 HETATM 4 C C4 GIV . . . H 3 -3.919 134.82 48.295 1 30.85 ? C4 GIV 1810 B 1 HETATM 5 C C5 GIV . . . H 3 -3.132 133.69 48.933 1 29.81 ? C5 GIV 1810 B 1 HETATM 6 C C6 GIV . . . H 3 -1.863 134.202 49.561 1 30.35 ? C6 GIV 1810 B 1 HETATM 7 O O1 GIV . . . H 3 -3.265 131.214 46.322 1 26.59 ? O1 GIV 1810 B 1 HETATM 8 O O3 GIV . . . H 3 -6.047 135.146 47.1 1 27.91 ? O3 GIV 1810 B 1 HETATM 9 O O4 GIV . . . H 3 -3.15 135.475 47.237 1 31.98 ? O4 GIV 1810 B 1 HETATM 10 O O5 GIV . . . H 3 -2.743 132.751 47.93 1 29.71 ? O5 GIV 1810 B 1 HETATM 11 O O6 GIV . . . H 3 -1.357 133.169 50.412 1 32.37 ? O6 GIV 1810 B 1 HETATM 12 O O2 GIV . . . H 3 -6.252 132.27 46.845 1 33.29 ? O2 GIV 1810 B 1 # _model_server_stats.io_time_ms 85 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #