data_4UFR # _model_server_result.job_id x-28nqeo5X5s5coa2FeUwQ _model_server_result.datetime_utc '2024-11-06 08:28:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ufr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1001}' # _entry.id 4UFR # _exptl.entry_id 4UFR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.51 _cell.angle_gamma 90 _cell.entry_id 4UFR _cell.length_a 205.148 _cell.length_b 59.777 _cell.length_c 112.21 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UFR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 34 1_555 A SG CYS 12 A CYS 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf2 A SG CYS 10 A CYS 38 1_555 A SG CYS 24 A CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf3 A SG CYS 320 A CYS 348 1_555 A SG CYS 345 A CYS 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf4 A SG CYS 451 A CYS 479 1_555 A SG CYS 469 A CYS 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 A SG CYS 452 A CYS 480 1_555 A SG CYS 457 A CYS 485 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf6 B SG CYS 5 B CYS 40 1_555 B SG CYS 11 B CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf7 B SG CYS 8 B CYS 43 1_555 B SG CYS 17 B CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf8 B SG CYS 20 B CYS 55 1_555 B SG CYS 39 B CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf9 B SG CYS 43 B CYS 78 1_555 B SG CYS 58 B CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf10 B SG CYS 61 B CYS 96 1_555 B SG CYS 69 B CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? disulf ? disulf11 B SG CYS 66 B CYS 101 1_555 B SG CYS 75 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? disulf ? disulf12 B SG CYS 78 B CYS 113 1_555 B SG CYS 89 B CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf13 B SG CYS 93 B CYS 128 1_555 B SG CYS 106 B CYS 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf14 C SG CYS 6 C CYS 34 1_555 C SG CYS 12 C CYS 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf15 C SG CYS 10 C CYS 38 1_555 C SG CYS 24 C CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf16 C SG CYS 320 C CYS 348 1_555 C SG CYS 345 C CYS 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf17 C SG CYS 451 C CYS 479 1_555 C SG CYS 469 C CYS 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? disulf ? disulf18 C SG CYS 452 C CYS 480 1_555 C SG CYS 457 C CYS 485 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf19 D SG CYS 5 D CYS 40 1_555 D SG CYS 11 D CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf20 D SG CYS 8 D CYS 43 1_555 D SG CYS 17 D CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? disulf ? disulf21 D SG CYS 20 D CYS 55 1_555 D SG CYS 39 D CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf22 D SG CYS 43 D CYS 78 1_555 D SG CYS 58 D CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf23 D SG CYS 61 D CYS 96 1_555 D SG CYS 69 D CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf24 D SG CYS 66 D CYS 101 1_555 D SG CYS 75 D CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf25 D SG CYS 78 D CYS 113 1_555 D SG CYS 89 D CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf26 D SG CYS 93 D CYS 128 1_555 D SG CYS 106 D CYS 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? covale ? covale1 A ND2 ASN 180 A ASN 208 1_555 E C1 NAG . A NAG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms ? # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 4UFR _atom_sites.fract_transf_matrix[1][1] 0.004875 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000817 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016729 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009036 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NAG A 1 1001 1001 NAG NAG . F 4 CL A 1 1545 1545 CL CL . G 4 CL A 1 1546 1546 CL CL . H 4 CL A 1 1547 1547 CL CL . I 4 CL B 1 1142 1142 CL CL . J 3 NAG C 1 1001 1001 NAG NAG . K 4 CL C 1 1545 1545 CL CL . L 4 CL D 1 1142 1142 CL CL . M 5 HOH A 1 2001 2001 HOH HOH . M 5 HOH A 2 2002 2002 HOH HOH . M 5 HOH A 3 2003 2003 HOH HOH . M 5 HOH A 4 2004 2004 HOH HOH . M 5 HOH A 5 2005 2005 HOH HOH . M 5 HOH A 6 2006 2006 HOH HOH . M 5 HOH A 7 2007 2007 HOH HOH . M 5 HOH A 8 2008 2008 HOH HOH . M 5 HOH A 9 2009 2009 HOH HOH . M 5 HOH A 10 2010 2010 HOH HOH . M 5 HOH A 11 2011 2011 HOH HOH . M 5 HOH A 12 2012 2012 HOH HOH . M 5 HOH A 13 2013 2013 HOH HOH . M 5 HOH A 14 2014 2014 HOH HOH . M 5 HOH A 15 2015 2015 HOH HOH . M 5 HOH A 16 2016 2016 HOH HOH . M 5 HOH A 17 2017 2017 HOH HOH . M 5 HOH A 18 2018 2018 HOH HOH . M 5 HOH A 19 2019 2019 HOH HOH . M 5 HOH A 20 2020 2020 HOH HOH . M 5 HOH A 21 2021 2021 HOH HOH . M 5 HOH A 22 2022 2022 HOH HOH . M 5 HOH A 23 2023 2023 HOH HOH . M 5 HOH A 24 2024 2024 HOH HOH . M 5 HOH A 25 2025 2025 HOH HOH . M 5 HOH A 26 2026 2026 HOH HOH . M 5 HOH A 27 2027 2027 HOH HOH . M 5 HOH A 28 2028 2028 HOH HOH . M 5 HOH A 29 2029 2029 HOH HOH . M 5 HOH A 30 2030 2030 HOH HOH . M 5 HOH A 31 2031 2031 HOH HOH . M 5 HOH A 32 2032 2032 HOH HOH . M 5 HOH A 33 2033 2033 HOH HOH . M 5 HOH A 34 2034 2034 HOH HOH . M 5 HOH A 35 2035 2035 HOH HOH . M 5 HOH A 36 2036 2036 HOH HOH . M 5 HOH A 37 2037 2037 HOH HOH . M 5 HOH A 38 2038 2038 HOH HOH . M 5 HOH A 39 2039 2039 HOH HOH . M 5 HOH A 40 2040 2040 HOH HOH . M 5 HOH A 41 2041 2041 HOH HOH . M 5 HOH A 42 2042 2042 HOH HOH . M 5 HOH A 43 2043 2043 HOH HOH . M 5 HOH A 44 2044 2044 HOH HOH . M 5 HOH A 45 2045 2045 HOH HOH . M 5 HOH A 46 2046 2046 HOH HOH . M 5 HOH A 47 2047 2047 HOH HOH . M 5 HOH A 48 2048 2048 HOH HOH . M 5 HOH A 49 2049 2049 HOH HOH . M 5 HOH A 50 2050 2050 HOH HOH . M 5 HOH A 51 2051 2051 HOH HOH . M 5 HOH A 52 2052 2052 HOH HOH . M 5 HOH A 53 2053 2053 HOH HOH . M 5 HOH A 54 2054 2054 HOH HOH . M 5 HOH A 55 2055 2055 HOH HOH . M 5 HOH A 56 2056 2056 HOH HOH . M 5 HOH A 57 2057 2057 HOH HOH . M 5 HOH A 58 2058 2058 HOH HOH . M 5 HOH A 59 2059 2059 HOH HOH . M 5 HOH A 60 2060 2060 HOH HOH . M 5 HOH A 61 2061 2061 HOH HOH . M 5 HOH A 62 2062 2062 HOH HOH . M 5 HOH A 63 2063 2063 HOH HOH . M 5 HOH A 64 2064 2064 HOH HOH . M 5 HOH A 65 2065 2065 HOH HOH . M 5 HOH A 66 2066 2066 HOH HOH . M 5 HOH A 67 2067 2067 HOH HOH . M 5 HOH A 68 2068 2068 HOH HOH . M 5 HOH A 69 2069 2069 HOH HOH . M 5 HOH A 70 2070 2070 HOH HOH . M 5 HOH A 71 2071 2071 HOH HOH . M 5 HOH A 72 2072 2072 HOH HOH . M 5 HOH A 73 2073 2073 HOH HOH . M 5 HOH A 74 2074 2074 HOH HOH . N 5 HOH B 1 2001 2001 HOH HOH . O 5 HOH C 1 2001 2001 HOH HOH . O 5 HOH C 2 2002 2002 HOH HOH . O 5 HOH C 3 2003 2003 HOH HOH . O 5 HOH C 4 2004 2004 HOH HOH . O 5 HOH C 5 2005 2005 HOH HOH . O 5 HOH C 6 2006 2006 HOH HOH . O 5 HOH C 7 2007 2007 HOH HOH . O 5 HOH C 8 2008 2008 HOH HOH . O 5 HOH C 9 2009 2009 HOH HOH . O 5 HOH C 10 2010 2010 HOH HOH . O 5 HOH C 11 2011 2011 HOH HOH . O 5 HOH C 12 2012 2012 HOH HOH . O 5 HOH C 13 2013 2013 HOH HOH . O 5 HOH C 14 2014 2014 HOH HOH . O 5 HOH C 15 2015 2015 HOH HOH . O 5 HOH C 16 2016 2016 HOH HOH . O 5 HOH C 17 2017 2017 HOH HOH . O 5 HOH C 18 2018 2018 HOH HOH . O 5 HOH C 19 2019 2019 HOH HOH . O 5 HOH C 20 2020 2020 HOH HOH . O 5 HOH C 21 2021 2021 HOH HOH . O 5 HOH C 22 2022 2022 HOH HOH . O 5 HOH C 23 2023 2023 HOH HOH . O 5 HOH C 24 2024 2024 HOH HOH . O 5 HOH C 25 2025 2025 HOH HOH . O 5 HOH C 26 2026 2026 HOH HOH . O 5 HOH C 27 2027 2027 HOH HOH . O 5 HOH C 28 2028 2028 HOH HOH . O 5 HOH C 29 2029 2029 HOH HOH . O 5 HOH C 30 2030 2030 HOH HOH . O 5 HOH C 31 2031 2031 HOH HOH . O 5 HOH C 32 2032 2032 HOH HOH . O 5 HOH C 33 2033 2033 HOH HOH . O 5 HOH C 34 2034 2034 HOH HOH . O 5 HOH C 35 2035 2035 HOH HOH . O 5 HOH C 36 2036 2036 HOH HOH . O 5 HOH C 37 2037 2037 HOH HOH . O 5 HOH C 38 2038 2038 HOH HOH . O 5 HOH C 39 2039 2039 HOH HOH . O 5 HOH C 40 2040 2040 HOH HOH . O 5 HOH C 41 2041 2041 HOH HOH . O 5 HOH C 42 2042 2042 HOH HOH . O 5 HOH C 43 2043 2043 HOH HOH . O 5 HOH C 44 2044 2044 HOH HOH . O 5 HOH C 45 2045 2045 HOH HOH . O 5 HOH C 46 2046 2046 HOH HOH . O 5 HOH C 47 2047 2047 HOH HOH . O 5 HOH C 48 2048 2048 HOH HOH . O 5 HOH C 49 2049 2049 HOH HOH . O 5 HOH C 50 2050 2050 HOH HOH . O 5 HOH C 51 2051 2051 HOH HOH . O 5 HOH C 52 2052 2052 HOH HOH . O 5 HOH C 53 2053 2053 HOH HOH . O 5 HOH C 54 2054 2054 HOH HOH . O 5 HOH C 55 2055 2055 HOH HOH . O 5 HOH C 56 2056 2056 HOH HOH . O 5 HOH C 57 2057 2057 HOH HOH . O 5 HOH C 58 2058 2058 HOH HOH . O 5 HOH C 59 2059 2059 HOH HOH . O 5 HOH C 60 2060 2060 HOH HOH . O 5 HOH C 61 2061 2061 HOH HOH . O 5 HOH C 62 2062 2062 HOH HOH . O 5 HOH C 63 2063 2063 HOH HOH . O 5 HOH C 64 2064 2064 HOH HOH . O 5 HOH C 65 2065 2065 HOH HOH . O 5 HOH C 66 2066 2066 HOH HOH . O 5 HOH C 67 2067 2067 HOH HOH . O 5 HOH C 68 2068 2068 HOH HOH . O 5 HOH C 69 2069 2069 HOH HOH . O 5 HOH C 70 2070 2070 HOH HOH . O 5 HOH C 71 2071 2071 HOH HOH . O 5 HOH C 72 2072 2072 HOH HOH . P 5 HOH D 1 2001 2001 HOH HOH . P 5 HOH D 2 2002 2002 HOH HOH . P 5 HOH D 3 2003 2003 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . J 3 0.172 69.03 87.619 1 108.83 ? C1 NAG 1001 C 1 HETATM 2 C C2 NAG . . . J 3 -0.721 69.762 86.62 1 115.05 ? C2 NAG 1001 C 1 HETATM 3 C C3 NAG . . . J 3 0.184 70.857 86.049 1 119.29 ? C3 NAG 1001 C 1 HETATM 4 C C4 NAG . . . J 3 0.479 71.823 87.215 1 120.9 ? C4 NAG 1001 C 1 HETATM 5 C C5 NAG . . . J 3 0.699 71.159 88.611 1 116 ? C5 NAG 1001 C 1 HETATM 6 C C6 NAG . . . J 3 0.066 71.983 89.744 1 115.69 ? C6 NAG 1001 C 1 HETATM 7 C C7 NAG . . . J 3 -0.927 67.843 85.039 1 110.09 ? C7 NAG 1001 C 1 HETATM 8 C C8 NAG . . . J 3 -1.855 67.029 84.183 1 108.89 ? C8 NAG 1001 C 1 HETATM 9 N N2 NAG . . . J 3 -1.46 68.863 85.719 1 112.8 ? N2 NAG 1001 C 1 HETATM 10 O O3 NAG . . . J 3 -0.416 71.521 84.957 1 122.86 ? O3 NAG 1001 C 1 HETATM 11 O O4 NAG . . . J 3 1.591 72.65 86.899 1 127.27 ? O4 NAG 1001 C 1 HETATM 12 O O5 NAG . . . J 3 0.244 69.811 88.791 1 110.5 ? O5 NAG 1001 C 1 HETATM 13 O O6 NAG . . . J 3 -1.155 71.404 90.166 1 106.23 ? O6 NAG 1001 C 1 HETATM 14 O O7 NAG . . . J 3 0.264 67.556 85.071 1 109.25 ? O7 NAG 1001 C 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #