data_4UG2
#
_model_server_result.job_id            TMOrmFj2ALupj2rb-aGXzA 
_model_server_result.datetime_utc      '2024-11-08 13:34:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ug2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1311}' 
#
_entry.id    4UG2 
#
_exptl.entry_id    4UG2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              499.52 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "2-[P-(2-CARBOXYETHYL)PHENYLETHYL-AMINO]-5'-N-ETHYLCARBOXAMIDO ADENOSINE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4UG2 
_cell.length_a            57.253 
_cell.length_b            105.944 
_cell.length_c            125.861 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4UG2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 71 A CYS 71 1_555 A SG CYS 159 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf2 A SG CYS 74 A CYS 74 1_555 A SG CYS 146 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf3 A SG CYS 77 A CYS 77 1_555 A SG CYS 166 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf4 A SG CYS 259 A CYS 259 1_555 A SG CYS 262 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf5 B SG CYS 74 B CYS 74 1_555 B SG CYS 146 B CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf6 B SG CYS 77 B CYS 77 1_555 B SG CYS 166 B CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf7 B SG CYS 259 B CYS 259 1_555 B SG CYS 262 B CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
#
_chem_comp.formula           'C23 H29 N7 O6' 
_chem_comp.formula_weight    499.52 
_chem_comp.id                NGI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "2-[P-(2-CARBOXYETHYL)PHENYLETHYL-AMINO]-5'-N-ETHYLCARBOXAMIDO ADENOSINE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C1 NGI sing 237 n n 
C1 H1 NGI sing 238 n n 
C1 H1A NGI sing 239 n n 
C1 H1B NGI sing 240 n n 
C3 N1 NGI sing 241 n n 
N1 C2 NGI sing 242 n n 
N1 HN1 NGI sing 243 n n 
O1 C3 NGI doub 244 n n 
C2 H2 NGI sing 245 n n 
C2 H2A NGI sing 246 n n 
C23 N2 NGI sing 247 n y 
N2 C8 NGI sing 248 n y 
N2 C5 NGI sing 249 n n 
C5 O2 NGI sing 250 n n 
O2 C4 NGI sing 251 n n 
C4 C3 NGI sing 252 n n 
C9 N3 NGI sing 253 n y 
N3 C8 NGI doub 254 n y 
C6 O3 NGI sing 255 n n 
O3 HO3 NGI sing 256 n n 
C4 C7 NGI sing 257 n n 
C4 H4 NGI sing 258 n n 
N4 C10 NGI sing 259 n n 
N4 HN4 NGI sing 260 n n 
N4 HN4A NGI sing 261 n n 
C7 O4 NGI sing 262 n n 
O4 HO4 NGI sing 263 n n 
C5 C6 NGI sing 264 n n 
C5 H5 NGI sing 265 n n 
N5 C10 NGI doub 266 n y 
N5 C11 NGI sing 267 n y 
O5 C20 NGI sing 268 n n 
O5 HO5 NGI sing 269 n n 
C6 C7 NGI sing 270 n n 
C6 H6 NGI sing 271 n n 
C12 N6 NGI sing 272 n n 
N6 C11 NGI sing 273 n n 
N6 HN6 NGI sing 274 n n 
O6 C20 NGI doub 275 n n 
C7 H7 NGI sing 276 n n 
C11 N7 NGI doub 277 n y 
N7 C23 NGI sing 278 n y 
C8 H8 NGI sing 279 n n 
C10 C9 NGI sing 280 n y 
C9 C23 NGI doub 281 n y 
C13 C12 NGI sing 282 n n 
C12 H12 NGI sing 283 n n 
C12 H12A NGI sing 284 n n 
C14 C13 NGI sing 285 n n 
C13 H13 NGI sing 286 n n 
C13 H13A NGI sing 287 n n 
C22 C14 NGI doub 288 n y 
C15 C14 NGI sing 289 n y 
C16 C15 NGI doub 290 n y 
C15 H15 NGI sing 291 n n 
C17 C16 NGI sing 292 n y 
C16 H16 NGI sing 293 n n 
C18 C17 NGI sing 294 n n 
C17 C21 NGI doub 295 n y 
C18 C19 NGI sing 296 n n 
C18 H18 NGI sing 297 n n 
C18 H18A NGI sing 298 n n 
C20 C19 NGI sing 299 n n 
C19 H19 NGI sing 300 n n 
C19 H19A NGI sing 301 n n 
C21 C22 NGI sing 302 n y 
C21 H21 NGI sing 303 n n 
C22 H22 NGI sing 304 n n 
#
_atom_sites.entry_id                     4UG2 
_atom_sites.fract_transf_matrix[1][1]    0.017466 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009439 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007945 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OLB A 1 1310 1310 OLB OLB . 
D 3 NGI A 1 1311 1311 NGI NGI . 
E 2 OLB B 1 1306 1306 OLB OLB . 
F 3 NGI B 1 1307 1307 NGI NGI . 
G 4 HOH A 1 2001 2001 HOH HOH . 
G 4 HOH A 2 2002 2002 HOH HOH . 
G 4 HOH A 3 2003 2003 HOH HOH . 
G 4 HOH A 4 2004 2004 HOH HOH . 
G 4 HOH A 5 2005 2005 HOH HOH . 
G 4 HOH A 6 2006 2006 HOH HOH . 
G 4 HOH A 7 2007 2007 HOH HOH . 
H 4 HOH B 1 2001 2001 HOH HOH . 
H 4 HOH B 2 2002 2002 HOH HOH . 
H 4 HOH B 3 2003 2003 HOH HOH . 
H 4 HOH B 4 2004 2004 HOH HOH . 
H 4 HOH B 5 2005 2005 HOH HOH . 
H 4 HOH B 6 2006 2006 HOH HOH . 
H 4 HOH B 7 2007 2007 HOH HOH . 
H 4 HOH B 8 2008 2008 HOH HOH . 
H 4 HOH B 9 2009 2009 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NGI . . . D 3 -0.049 -18.689 28.708 1 28.59 ? C1 NGI 1311 A 1 
HETATM 2 N N1 NGI . . . D 3 -2.342 -18.432 27.844 1 29.63 ? N1 NGI 1311 A 1 
HETATM 3 O O1 NGI . . . D 3 -3.388 -19.747 26.322 1 30.25 ? O1 NGI 1311 A 1 
HETATM 4 C C2 NGI . . . D 3 -1.291 -19.376 28.189 1 28.83 ? C2 NGI 1311 A 1 
HETATM 5 N N2 NGI . . . D 3 -5.248 -18.287 23.43 1 28.8 ? N2 NGI 1311 A 1 
HETATM 6 O O2 NGI . . . D 3 -3.934 -17.217 25.114 1 29.77 ? O2 NGI 1311 A 1 
HETATM 7 C C3 NGI . . . D 3 -3.24 -18.67 26.885 1 29.91 ? C3 NGI 1311 A 1 
HETATM 8 N N3 NGI . . . D 3 -4.827 -20.2 22.421 1 28.79 ? N3 NGI 1311 A 1 
HETATM 9 O O3 NGI . . . D 3 -6.756 -15.993 25.832 1 29.32 ? O3 NGI 1311 A 1 
HETATM 10 C C4 NGI . . . D 3 -4.107 -17.516 26.505 1 29.84 ? C4 NGI 1311 A 1 
HETATM 11 N N4 NGI . . . D 3 -6.112 -20.977 19.822 1 28.25 ? N4 NGI 1311 A 1 
HETATM 12 O O4 NGI . . . D 3 -6.064 -17.452 27.948 1 29.94 ? O4 NGI 1311 A 1 
HETATM 13 C C5 NGI . . . D 3 -5.192 -17.178 24.429 1 29.42 ? C5 NGI 1311 A 1 
HETATM 14 N N5 NGI . . . D 3 -7.206 -18.901 19.929 1 28.32 ? N5 NGI 1311 A 1 
HETATM 15 O O5 NGI . . . D 3 -13.844 -21.568 11.681 1 46.68 ? O5 NGI 1311 A 1 
HETATM 16 C C6 NGI . . . D 3 -6.271 -17.3 25.5 1 29.99 ? C6 NGI 1311 A 1 
HETATM 17 N N6 NGI . . . D 3 -8.312 -16.803 20.048 1 28.26 ? N6 NGI 1311 A 1 
HETATM 18 O O6 NGI . . . D 3 -11.704 -21.594 11.163 1 46.72 ? O6 NGI 1311 A 1 
HETATM 19 C C7 NGI . . . D 3 -5.559 -17.908 26.691 1 29.63 ? C7 NGI 1311 A 1 
HETATM 20 N N7 NGI . . . D 3 -6.835 -17.446 21.736 1 28.66 ? N7 NGI 1311 A 1 
HETATM 21 C C8 NGI . . . D 3 -4.553 -19.433 23.497 1 28.85 ? C8 NGI 1311 A 1 
HETATM 22 C C9 NGI . . . D 3 -5.712 -19.521 21.665 1 28.65 ? C9 NGI 1311 A 1 
HETATM 23 C C10 NGI . . . D 3 -6.349 -19.804 20.46 1 28.53 ? C10 NGI 1311 A 1 
HETATM 24 C C11 NGI . . . D 3 -7.453 -17.723 20.562 1 28.58 ? C11 NGI 1311 A 1 
HETATM 25 C C12 NGI . . . D 3 -8.838 -16.895 18.698 1 29.42 ? C12 NGI 1311 A 1 
HETATM 26 C C13 NGI . . . D 3 -10.139 -17.69 18.632 1 30.57 ? C13 NGI 1311 A 1 
HETATM 27 C C14 NGI . . . D 3 -10.447 -18.17 17.229 1 31.79 ? C14 NGI 1311 A 1 
HETATM 28 C C15 NGI . . . D 3 -9.785 -19.28 16.693 1 32.48 ? C15 NGI 1311 A 1 
HETATM 29 C C16 NGI . . . D 3 -10.083 -19.723 15.402 1 33.61 ? C16 NGI 1311 A 1 
HETATM 30 C C17 NGI . . . D 3 -11.051 -19.053 14.643 1 35.25 ? C17 NGI 1311 A 1 
HETATM 31 C C18 NGI . . . D 3 -11.385 -19.522 13.243 1 37.54 ? C18 NGI 1311 A 1 
HETATM 32 C C19 NGI . . . D 3 -12.427 -20.64 13.343 1 42.24 ? C19 NGI 1311 A 1 
HETATM 33 C C20 NGI . . . D 3 -12.696 -21.295 12.004 1 45.09 ? C20 NGI 1311 A 1 
HETATM 34 C C21 NGI . . . D 3 -11.713 -17.944 15.18 1 34.16 ? C21 NGI 1311 A 1 
HETATM 35 C C22 NGI . . . D 3 -11.413 -17.505 16.471 1 32.7 ? C22 NGI 1311 A 1 
HETATM 36 C C23 NGI . . . D 3 -5.969 -18.318 22.303 1 28.43 ? C23 NGI 1311 A 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           36 
#