data_4UGT # _model_server_result.job_id bdrYicemzbl0wB1EkM8L6A _model_server_result.datetime_utc '2024-11-05 09:23:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ugt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":904}' # _entry.id 4UGT # _exptl.entry_id 4UGT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 301.407 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[3-[[(3R)-pyrrolidin-3-yl]oxymethyl]phenyl]thiophene-2-carboximidamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4UGT _cell.length_a 80.71 _cell.length_b 94.8 _cell.length_c 62.05 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UGT _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H19 N3 O S' _chem_comp.formula_weight 301.407 _chem_comp.id UGT _chem_comp.mon_nstd_flag . _chem_comp.name N-[3-[[(3R)-pyrrolidin-3-yl]oxymethyl]phenyl]thiophene-2-carboximidamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N14 C06 UGT sing 486 n n C06 C05 UGT sing 487 n n C06 N07 UGT doub 488 n n C05 C04 UGT doub 489 n y C05 S01 UGT sing 490 n y C04 C03 UGT sing 491 n y C03 C02 UGT doub 492 n y C02 S01 UGT sing 493 n y N07 C08 UGT sing 494 n n C08 C13 UGT sing 495 n y C08 C09 UGT doub 496 n y C13 C12 UGT doub 497 n y C09 C10 UGT sing 498 n y C10 C11 UGT doub 499 n y C11 C12 UGT sing 500 n y C12 C15 UGT sing 501 n n C15 O16 UGT sing 502 n n O16 C17 UGT sing 503 n n C17 C21 UGT sing 504 n n C17 C18 UGT sing 505 n n C21 C20 UGT sing 506 n n C18 N19 UGT sing 507 n n N19 C20 UGT sing 508 n n N14 H141 UGT sing 509 n n N14 H142 UGT sing 510 n n C04 H04 UGT sing 511 n n C03 H03 UGT sing 512 n n C02 H02 UGT sing 513 n n C13 H13 UGT sing 514 n n C09 H09 UGT sing 515 n n C10 H10 UGT sing 516 n n C11 H11 UGT sing 517 n n C15 H151 UGT sing 518 n n C15 H152 UGT sing 519 n n C17 H17 UGT sing 520 n n C21 H211 UGT sing 521 n n C21 H212 UGT sing 522 n n C18 H181 UGT sing 523 n n C18 H182 UGT sing 524 n n C20 H201 UGT sing 525 n n C20 H202 UGT sing 526 n n N19 H19 UGT sing 527 n n # _atom_sites.entry_id 4UGT _atom_sites.fract_transf_matrix[1][1] 0.01239 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010549 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016116 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 901 901 HEM HEM . C 3 H4B A 1 902 902 H4B H4B . D 4 CL A 1 903 903 CL CL . E 5 UGT A 1 904 904 UGT UGT . F 6 GOL A 1 905 905 GOL GOL . G 7 HOH A 1 2001 2001 HOH HOH . G 7 HOH A 2 2002 2002 HOH HOH . G 7 HOH A 3 2003 2003 HOH HOH . G 7 HOH A 4 2004 2004 HOH HOH . G 7 HOH A 5 2005 2005 HOH HOH . G 7 HOH A 6 2006 2006 HOH HOH . G 7 HOH A 7 2007 2007 HOH HOH . G 7 HOH A 8 2008 2008 HOH HOH . G 7 HOH A 9 2009 2009 HOH HOH . G 7 HOH A 10 2010 2010 HOH HOH . G 7 HOH A 11 2011 2011 HOH HOH . G 7 HOH A 12 2012 2012 HOH HOH . G 7 HOH A 13 2013 2013 HOH HOH . G 7 HOH A 14 2014 2014 HOH HOH . G 7 HOH A 15 2015 2015 HOH HOH . G 7 HOH A 16 2016 2016 HOH HOH . G 7 HOH A 17 2017 2017 HOH HOH . G 7 HOH A 18 2018 2018 HOH HOH . G 7 HOH A 19 2019 2019 HOH HOH . G 7 HOH A 20 2020 2020 HOH HOH . G 7 HOH A 21 2021 2021 HOH HOH . G 7 HOH A 22 2022 2022 HOH HOH . G 7 HOH A 23 2023 2023 HOH HOH . G 7 HOH A 24 2024 2024 HOH HOH . G 7 HOH A 25 2025 2025 HOH HOH . G 7 HOH A 26 2026 2026 HOH HOH . G 7 HOH A 27 2027 2027 HOH HOH . G 7 HOH A 28 2028 2028 HOH HOH . G 7 HOH A 29 2029 2029 HOH HOH . G 7 HOH A 30 2030 2030 HOH HOH . G 7 HOH A 31 2031 2031 HOH HOH . G 7 HOH A 32 2032 2032 HOH HOH . G 7 HOH A 33 2033 2033 HOH HOH . G 7 HOH A 34 2034 2034 HOH HOH . G 7 HOH A 35 2035 2035 HOH HOH . G 7 HOH A 36 2036 2036 HOH HOH . G 7 HOH A 37 2037 2037 HOH HOH . G 7 HOH A 38 2038 2038 HOH HOH . G 7 HOH A 39 2039 2039 HOH HOH . G 7 HOH A 40 2040 2040 HOH HOH . G 7 HOH A 41 2041 2041 HOH HOH . G 7 HOH A 42 2042 2042 HOH HOH . G 7 HOH A 43 2043 2043 HOH HOH . G 7 HOH A 44 2044 2044 HOH HOH . G 7 HOH A 45 2045 2045 HOH HOH . G 7 HOH A 46 2046 2046 HOH HOH . G 7 HOH A 47 2047 2047 HOH HOH . G 7 HOH A 48 2048 2048 HOH HOH . G 7 HOH A 49 2049 2049 HOH HOH . G 7 HOH A 50 2050 2050 HOH HOH . G 7 HOH A 51 2051 2051 HOH HOH . G 7 HOH A 52 2052 2052 HOH HOH . G 7 HOH A 53 2053 2053 HOH HOH . G 7 HOH A 54 2054 2054 HOH HOH . G 7 HOH A 55 2055 2055 HOH HOH . G 7 HOH A 56 2056 2056 HOH HOH . G 7 HOH A 57 2057 2057 HOH HOH . G 7 HOH A 58 2058 2058 HOH HOH . G 7 HOH A 59 2059 2059 HOH HOH . G 7 HOH A 60 2060 2060 HOH HOH . G 7 HOH A 61 2061 2061 HOH HOH . G 7 HOH A 62 2062 2062 HOH HOH . G 7 HOH A 63 2063 2063 HOH HOH . G 7 HOH A 64 2064 2064 HOH HOH . G 7 HOH A 65 2065 2065 HOH HOH . G 7 HOH A 66 2066 2066 HOH HOH . G 7 HOH A 67 2067 2067 HOH HOH . G 7 HOH A 68 2068 2068 HOH HOH . G 7 HOH A 69 2069 2069 HOH HOH . G 7 HOH A 70 2070 2070 HOH HOH . G 7 HOH A 71 2071 2071 HOH HOH . G 7 HOH A 72 2072 2072 HOH HOH . G 7 HOH A 73 2073 2073 HOH HOH . G 7 HOH A 74 2074 2074 HOH HOH . G 7 HOH A 75 2075 2075 HOH HOH . G 7 HOH A 76 2076 2076 HOH HOH . G 7 HOH A 77 2077 2077 HOH HOH . G 7 HOH A 78 2078 2078 HOH HOH . G 7 HOH A 79 2079 2079 HOH HOH . G 7 HOH A 80 2080 2080 HOH HOH . G 7 HOH A 81 2081 2081 HOH HOH . G 7 HOH A 82 2082 2082 HOH HOH . G 7 HOH A 83 2083 2083 HOH HOH . G 7 HOH A 84 2084 2084 HOH HOH . G 7 HOH A 85 2085 2085 HOH HOH . G 7 HOH A 86 2086 2086 HOH HOH . G 7 HOH A 87 2087 2087 HOH HOH . G 7 HOH A 88 2088 2088 HOH HOH . G 7 HOH A 89 2089 2089 HOH HOH . G 7 HOH A 90 2090 2090 HOH HOH . G 7 HOH A 91 2091 2091 HOH HOH . G 7 HOH A 92 2092 2092 HOH HOH . G 7 HOH A 93 2093 2093 HOH HOH . G 7 HOH A 94 2094 2094 HOH HOH . G 7 HOH A 95 2095 2095 HOH HOH . G 7 HOH A 96 2096 2096 HOH HOH . G 7 HOH A 97 2097 2097 HOH HOH . G 7 HOH A 98 2098 2098 HOH HOH . G 7 HOH A 99 2099 2099 HOH HOH . G 7 HOH A 100 2100 2100 HOH HOH . G 7 HOH A 101 2101 2101 HOH HOH . G 7 HOH A 102 2102 2102 HOH HOH . G 7 HOH A 103 2103 2103 HOH HOH . G 7 HOH A 104 2104 2104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N14 UGT . . . E 5 2.131 17.572 26.57 1 47.37 ? N14 UGT 904 A 1 HETATM 2 C C06 UGT . . . E 5 3.009 17.666 25.671 1 51.81 ? C06 UGT 904 A 1 HETATM 3 C C05 UGT . . . E 5 3.114 18.927 24.885 1 52.77 ? C05 UGT 904 A 1 HETATM 4 C C04 UGT . . . E 5 4.154 19.772 24.522 1 49.45 ? C04 UGT 904 A 1 HETATM 5 C C03 UGT . . . E 5 3.72 20.847 23.734 1 53.44 ? C03 UGT 904 A 1 HETATM 6 C C02 UGT . . . E 5 2.36 20.882 23.438 1 57.23 ? C02 UGT 904 A 1 HETATM 7 S S01 UGT . . . E 5 1.643 19.503 24.201 1 64.86 ? S01 UGT 904 A 1 HETATM 8 N N07 UGT . . . E 5 3.823 16.634 25.441 1 54.65 ? N07 UGT 904 A 1 HETATM 9 C C08 UGT . . . E 5 4.487 16.448 24.276 1 56.21 ? C08 UGT 904 A 1 HETATM 10 C C13 UGT . . . E 5 5.819 16.043 24.297 1 58.62 ? C13 UGT 904 A 1 HETATM 11 C C09 UGT . . . E 5 3.846 16.622 23.052 1 55.64 ? C09 UGT 904 A 1 HETATM 12 C C10 UGT . . . E 5 4.534 16.424 21.864 1 58.84 ? C10 UGT 904 A 1 HETATM 13 C C11 UGT . . . E 5 5.864 16.023 21.889 1 59.3 ? C11 UGT 904 A 1 HETATM 14 C C12 UGT . . . E 5 6.508 15.833 23.105 1 60.82 ? C12 UGT 904 A 1 HETATM 15 C C15 UGT . . . E 5 7.956 15.401 23.132 1 68.82 ? C15 UGT 904 A 1 HETATM 16 O O16 UGT . . . E 5 8.411 15.11 21.811 1 75.93 ? O16 UGT 904 A 1 HETATM 17 C C17 UGT . . . E 5 8.636 13.713 21.627 1 79.77 ? C17 UGT 904 A 1 HETATM 18 C C21 UGT . . . E 5 9.578 13.171 22.689 1 80.39 ? C21 UGT 904 A 1 HETATM 19 C C18 UGT . . . E 5 9.327 13.443 20.297 1 81.22 ? C18 UGT 904 A 1 HETATM 20 N N19 UGT . . . E 5 10.273 12.333 20.528 1 82.56 ? N19 UGT 904 A 1 HETATM 21 C C20 UGT . . . E 5 10.551 12.242 21.973 1 81.93 ? C20 UGT 904 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 362 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #