data_4UHQ # _model_server_result.job_id lhT0i1a6LrJoKcO3z8Xkbw _model_server_result.datetime_utc '2025-04-24 11:31:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uhq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1777}' # _entry.id 4UHQ # _exptl.entry_id 4UHQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4UHQ _cell.length_a 100.575 _cell.length_b 100.575 _cell.length_c 71.532 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UHQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 97 A HIS 738 1_555 E NI NI . A NI 1778 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc2 A NE2 HIS 122 A HIS 763 1_555 E NI NI . A NI 1778 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc3 A NE2 HIS 126 A HIS 767 1_555 E NI NI . A NI 1778 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc4 C O6 CIT . A CIT 1776 1_555 E NI NI . A NI 1778 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc5 C O7 CIT . A CIT 1776 1_555 E NI NI . A NI 1778 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc6 E NI NI . A NI 1778 1_555 H O HOH . A HOH 2057 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc7 B ND1 HIS 97 B HIS 738 1_555 G NI NI . B NI 1777 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc8 B NE2 HIS 122 B HIS 763 1_555 G NI NI . B NI 1777 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc9 B NE2 HIS 126 B HIS 767 1_555 G NI NI . B NI 1777 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc10 F O7 CIT . B CIT 1776 1_555 G NI NI . B NI 1777 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc11 F O6 CIT . B CIT 1776 1_555 G NI NI . B NI 1777 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc12 G NI NI . B NI 1777 1_555 I O HOH . B HOH 2034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 4UHQ _atom_sites.fract_transf_matrix[1][1] 0.009943 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009943 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01398 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT A 1 1776 1776 CIT CIT . D 2 CIT A 1 1777 1777 CIT CIT . E 3 NI A 1 1778 1778 NI NI . F 2 CIT B 1 1776 1776 CIT CIT . G 3 NI B 1 1777 1777 NI NI . H 4 HOH A 1 2001 2001 HOH HOH . H 4 HOH A 2 2002 2002 HOH HOH . H 4 HOH A 3 2003 2003 HOH HOH . H 4 HOH A 4 2004 2004 HOH HOH . H 4 HOH A 5 2005 2005 HOH HOH . H 4 HOH A 6 2006 2006 HOH HOH . H 4 HOH A 7 2007 2007 HOH HOH . H 4 HOH A 8 2008 2008 HOH HOH . H 4 HOH A 9 2009 2009 HOH HOH . H 4 HOH A 10 2010 2010 HOH HOH . H 4 HOH A 11 2011 2011 HOH HOH . H 4 HOH A 12 2012 2012 HOH HOH . H 4 HOH A 13 2013 2013 HOH HOH . H 4 HOH A 14 2014 2014 HOH HOH . H 4 HOH A 15 2015 2015 HOH HOH . H 4 HOH A 16 2016 2016 HOH HOH . H 4 HOH A 17 2017 2017 HOH HOH . H 4 HOH A 18 2018 2018 HOH HOH . H 4 HOH A 19 2019 2019 HOH HOH . H 4 HOH A 20 2020 2020 HOH HOH . H 4 HOH A 21 2021 2021 HOH HOH . H 4 HOH A 22 2022 2022 HOH HOH . H 4 HOH A 23 2023 2023 HOH HOH . H 4 HOH A 24 2024 2024 HOH HOH . H 4 HOH A 25 2025 2025 HOH HOH . H 4 HOH A 26 2026 2026 HOH HOH . H 4 HOH A 27 2027 2027 HOH HOH . H 4 HOH A 28 2028 2028 HOH HOH . H 4 HOH A 29 2029 2029 HOH HOH . H 4 HOH A 30 2030 2030 HOH HOH . H 4 HOH A 31 2031 2031 HOH HOH . H 4 HOH A 32 2032 2032 HOH HOH . H 4 HOH A 33 2033 2033 HOH HOH . H 4 HOH A 34 2034 2034 HOH HOH . H 4 HOH A 35 2035 2035 HOH HOH . H 4 HOH A 36 2036 2036 HOH HOH . H 4 HOH A 37 2037 2037 HOH HOH . H 4 HOH A 38 2038 2038 HOH HOH . H 4 HOH A 39 2039 2039 HOH HOH . H 4 HOH A 40 2040 2040 HOH HOH . H 4 HOH A 41 2041 2041 HOH HOH . H 4 HOH A 42 2042 2042 HOH HOH . H 4 HOH A 43 2043 2043 HOH HOH . H 4 HOH A 44 2044 2044 HOH HOH . H 4 HOH A 45 2045 2045 HOH HOH . H 4 HOH A 46 2046 2046 HOH HOH . H 4 HOH A 47 2047 2047 HOH HOH . H 4 HOH A 48 2048 2048 HOH HOH . H 4 HOH A 49 2049 2049 HOH HOH . H 4 HOH A 50 2050 2050 HOH HOH . H 4 HOH A 51 2051 2051 HOH HOH . H 4 HOH A 52 2052 2052 HOH HOH . H 4 HOH A 53 2053 2053 HOH HOH . H 4 HOH A 54 2054 2054 HOH HOH . H 4 HOH A 55 2055 2055 HOH HOH . H 4 HOH A 56 2056 2056 HOH HOH . H 4 HOH A 57 2057 2057 HOH HOH . H 4 HOH A 58 2058 2058 HOH HOH . H 4 HOH A 59 2059 2059 HOH HOH . H 4 HOH A 60 2060 2060 HOH HOH . H 4 HOH A 61 2061 2061 HOH HOH . H 4 HOH A 62 2062 2062 HOH HOH . H 4 HOH A 63 2063 2063 HOH HOH . H 4 HOH A 64 2064 2064 HOH HOH . H 4 HOH A 65 2065 2065 HOH HOH . H 4 HOH A 66 2066 2066 HOH HOH . H 4 HOH A 67 2067 2067 HOH HOH . H 4 HOH A 68 2068 2068 HOH HOH . H 4 HOH A 69 2069 2069 HOH HOH . H 4 HOH A 70 2070 2070 HOH HOH . H 4 HOH A 71 2071 2071 HOH HOH . H 4 HOH A 72 2072 2072 HOH HOH . H 4 HOH A 73 2073 2073 HOH HOH . H 4 HOH A 74 2074 2074 HOH HOH . H 4 HOH A 75 2075 2075 HOH HOH . H 4 HOH A 76 2076 2076 HOH HOH . H 4 HOH A 77 2077 2077 HOH HOH . H 4 HOH A 78 2078 2078 HOH HOH . H 4 HOH A 79 2079 2079 HOH HOH . H 4 HOH A 80 2080 2080 HOH HOH . H 4 HOH A 81 2081 2081 HOH HOH . H 4 HOH A 82 2082 2082 HOH HOH . H 4 HOH A 83 2083 2083 HOH HOH . H 4 HOH A 84 2084 2084 HOH HOH . H 4 HOH A 85 2085 2085 HOH HOH . H 4 HOH A 86 2086 2086 HOH HOH . I 4 HOH B 1 2001 2001 HOH HOH . I 4 HOH B 2 2002 2002 HOH HOH . I 4 HOH B 3 2003 2003 HOH HOH . I 4 HOH B 4 2004 2004 HOH HOH . I 4 HOH B 5 2005 2005 HOH HOH . I 4 HOH B 6 2006 2006 HOH HOH . I 4 HOH B 7 2007 2007 HOH HOH . I 4 HOH B 8 2008 2008 HOH HOH . I 4 HOH B 9 2009 2009 HOH HOH . I 4 HOH B 10 2010 2010 HOH HOH . I 4 HOH B 11 2011 2011 HOH HOH . I 4 HOH B 12 2012 2012 HOH HOH . I 4 HOH B 13 2013 2013 HOH HOH . I 4 HOH B 14 2014 2014 HOH HOH . I 4 HOH B 15 2015 2015 HOH HOH . I 4 HOH B 16 2016 2016 HOH HOH . I 4 HOH B 17 2017 2017 HOH HOH . I 4 HOH B 18 2018 2018 HOH HOH . I 4 HOH B 19 2019 2019 HOH HOH . I 4 HOH B 20 2020 2020 HOH HOH . I 4 HOH B 21 2021 2021 HOH HOH . I 4 HOH B 22 2022 2022 HOH HOH . I 4 HOH B 23 2023 2023 HOH HOH . I 4 HOH B 24 2024 2024 HOH HOH . I 4 HOH B 25 2025 2025 HOH HOH . I 4 HOH B 26 2026 2026 HOH HOH . I 4 HOH B 27 2027 2027 HOH HOH . I 4 HOH B 28 2028 2028 HOH HOH . I 4 HOH B 29 2029 2029 HOH HOH . I 4 HOH B 30 2030 2030 HOH HOH . I 4 HOH B 31 2031 2031 HOH HOH . I 4 HOH B 32 2032 2032 HOH HOH . I 4 HOH B 33 2033 2033 HOH HOH . I 4 HOH B 34 2034 2034 HOH HOH . I 4 HOH B 35 2035 2035 HOH HOH . I 4 HOH B 36 2036 2036 HOH HOH . I 4 HOH B 37 2037 2037 HOH HOH . I 4 HOH B 38 2038 2038 HOH HOH . I 4 HOH B 39 2039 2039 HOH HOH . I 4 HOH B 40 2040 2040 HOH HOH . I 4 HOH B 41 2041 2041 HOH HOH . I 4 HOH B 42 2042 2042 HOH HOH . I 4 HOH B 43 2043 2043 HOH HOH . I 4 HOH B 44 2044 2044 HOH HOH . I 4 HOH B 45 2045 2045 HOH HOH . I 4 HOH B 46 2046 2046 HOH HOH . I 4 HOH B 47 2047 2047 HOH HOH . I 4 HOH B 48 2048 2048 HOH HOH . I 4 HOH B 49 2049 2049 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . A . D 2 29.356 27.331 -5.502 0.5 24.89 ? C1 CIT 1777 A 1 HETATM 2 C C1 CIT . B . D 2 24.634 28.461 -4.9 0.5 28.41 ? C1 CIT 1777 A 1 HETATM 3 O O1 CIT . A . D 2 30.27 27.126 -6.329 0.5 25.32 ? O1 CIT 1777 A 1 HETATM 4 O O1 CIT . B . D 2 23.594 28.853 -5.497 0.5 26.08 ? O1 CIT 1777 A 1 HETATM 5 O O2 CIT . A . D 2 29.635 27.345 -4.262 0.5 23.99 ? O2 CIT 1777 A 1 HETATM 6 O O2 CIT . B . D 2 24.555 27.961 -3.729 0.5 25.92 ? O2 CIT 1777 A 1 HETATM 7 C C2 CIT . A . D 2 27.994 27.58 -6.099 0.5 22.84 ? C2 CIT 1777 A 1 HETATM 8 C C2 CIT . B . D 2 25.958 28.609 -5.604 0.5 21.7 ? C2 CIT 1777 A 1 HETATM 9 C C3 CIT . A . D 2 26.957 28.156 -5.141 0.5 24.57 ? C3 CIT 1777 A 1 HETATM 10 C C3 CIT . B . D 2 27.029 27.638 -5.091 0.5 24.13 ? C3 CIT 1777 A 1 HETATM 11 O O7 CIT . A . D 2 27.397 29.44 -4.626 0.5 23.85 ? O7 CIT 1777 A 1 HETATM 12 O O7 CIT . B . D 2 26.388 26.355 -4.955 0.5 26.22 ? O7 CIT 1777 A 1 HETATM 13 C C4 CIT . A . D 2 25.665 28.336 -5.924 0.5 22.38 ? C4 CIT 1777 A 1 HETATM 14 C C4 CIT . B . D 2 28.079 27.514 -6.18 0.5 21.89 ? C4 CIT 1777 A 1 HETATM 15 C C5 CIT . A . D 2 24.527 28.86 -5.086 0.5 27.15 ? C5 CIT 1777 A 1 HETATM 16 C C5 CIT . B . D 2 29.196 26.564 -5.836 0.5 22.68 ? C5 CIT 1777 A 1 HETATM 17 O O3 CIT . A . D 2 23.407 29.051 -5.621 0.5 25.32 ? O3 CIT 1777 A 1 HETATM 18 O O3 CIT . B . D 2 30.359 26.797 -6.232 0.5 26.75 ? O3 CIT 1777 A 1 HETATM 19 O O4 CIT . A . D 2 24.643 29.097 -3.855 0.5 36.08 ? O4 CIT 1777 A 1 HETATM 20 O O4 CIT . B . D 2 29.01 25.548 -5.135 0.5 24.31 ? O4 CIT 1777 A 1 HETATM 21 C C6 CIT . A . D 2 26.772 27.129 -4.051 0.5 36.35 ? C6 CIT 1777 A 1 HETATM 22 C C6 CIT . B . D 2 27.64 28.089 -3.748 0.5 29 ? C6 CIT 1777 A 1 HETATM 23 O O5 CIT . A . D 2 26.224 26.064 -4.406 0.5 40.63 ? O5 CIT 1777 A 1 HETATM 24 O O5 CIT . B . D 2 28.882 28.232 -3.607 0.5 22.37 ? O5 CIT 1777 A 1 HETATM 25 O O6 CIT . A . D 2 27.193 27.293 -2.87 0.5 30.05 ? O6 CIT 1777 A 1 HETATM 26 O O6 CIT . B . D 2 26.917 28.315 -2.75 0.5 32.15 ? O6 CIT 1777 A 1 HETATM 27 H H21 CIT . A . D 2 28.105 28.263 -6.942 0.5 27.41 ? H21 CIT 1777 A 1 HETATM 28 H H21 CIT . B . D 2 25.812 28.444 -6.671 0.5 26.04 ? H21 CIT 1777 A 1 HETATM 29 H H22 CIT . A . D 2 27.613 26.64 -6.498 0.5 27.41 ? H22 CIT 1777 A 1 HETATM 30 H H22 CIT . B . D 2 26.316 29.63 -5.477 0.5 26.04 ? H22 CIT 1777 A 1 HETATM 31 H HO7 CIT . A . D 2 27.489 29.387 -3.652 0.5 28.62 ? HO7 CIT 1777 A 1 HETATM 32 H HO7 CIT . B . D 2 26.478 26.041 -4.031 0.5 31.46 ? HO7 CIT 1777 A 1 HETATM 33 H H41 CIT . A . D 2 25.376 27.377 -6.355 0.5 26.86 ? H41 CIT 1777 A 1 HETATM 34 H H41 CIT . B . D 2 28.501 28.499 -6.378 0.5 26.27 ? H41 CIT 1777 A 1 HETATM 35 H H42 CIT . A . D 2 25.844 29.025 -6.75 0.5 26.86 ? H42 CIT 1777 A 1 HETATM 36 H H42 CIT . B . D 2 27.598 27.175 -7.098 0.5 26.27 ? H42 CIT 1777 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 36 #