data_4UHR # _model_server_result.job_id 7mXkIG4r26hOt4NYQUzjNQ _model_server_result.datetime_utc '2025-03-05 20:23:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uhr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1320}' # _entry.id 4UHR # _exptl.entry_id 4UHR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 499.52 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2-[P-(2-CARBOXYETHYL)PHENYLETHYL-AMINO]-5'-N-ETHYLCARBOXAMIDO ADENOSINE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.83 _cell.angle_gamma 90 _cell.entry_id 4UHR _cell.length_a 60.407 _cell.length_b 59.187 _cell.length_c 65.058 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UHR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 71 A CYS 71 1_555 A SG CYS 159 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 74 A CYS 74 1_555 A SG CYS 146 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 A SG CYS 77 A CYS 77 1_555 A SG CYS 166 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 259 A CYS 259 1_555 A SG CYS 262 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C23 H29 N7 O6' _chem_comp.formula_weight 499.52 _chem_comp.id NGI _chem_comp.mon_nstd_flag . _chem_comp.name "2-[P-(2-CARBOXYETHYL)PHENYLETHYL-AMINO]-5'-N-ETHYLCARBOXAMIDO ADENOSINE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 NGI sing 237 n n C1 H1 NGI sing 238 n n C1 H1A NGI sing 239 n n C1 H1B NGI sing 240 n n C3 N1 NGI sing 241 n n N1 C2 NGI sing 242 n n N1 HN1 NGI sing 243 n n O1 C3 NGI doub 244 n n C2 H2 NGI sing 245 n n C2 H2A NGI sing 246 n n C23 N2 NGI sing 247 n y N2 C8 NGI sing 248 n y N2 C5 NGI sing 249 n n C5 O2 NGI sing 250 n n O2 C4 NGI sing 251 n n C4 C3 NGI sing 252 n n C9 N3 NGI sing 253 n y N3 C8 NGI doub 254 n y C6 O3 NGI sing 255 n n O3 HO3 NGI sing 256 n n C4 C7 NGI sing 257 n n C4 H4 NGI sing 258 n n N4 C10 NGI sing 259 n n N4 HN4 NGI sing 260 n n N4 HN4A NGI sing 261 n n C7 O4 NGI sing 262 n n O4 HO4 NGI sing 263 n n C5 C6 NGI sing 264 n n C5 H5 NGI sing 265 n n N5 C10 NGI doub 266 n y N5 C11 NGI sing 267 n y O5 C20 NGI sing 268 n n O5 HO5 NGI sing 269 n n C6 C7 NGI sing 270 n n C6 H6 NGI sing 271 n n C12 N6 NGI sing 272 n n N6 C11 NGI sing 273 n n N6 HN6 NGI sing 274 n n O6 C20 NGI doub 275 n n C7 H7 NGI sing 276 n n C11 N7 NGI doub 277 n y N7 C23 NGI sing 278 n y C8 H8 NGI sing 279 n n C10 C9 NGI sing 280 n y C9 C23 NGI doub 281 n y C13 C12 NGI sing 282 n n C12 H12 NGI sing 283 n n C12 H12A NGI sing 284 n n C14 C13 NGI sing 285 n n C13 H13 NGI sing 286 n n C13 H13A NGI sing 287 n n C22 C14 NGI doub 288 n y C15 C14 NGI sing 289 n y C16 C15 NGI doub 290 n y C15 H15 NGI sing 291 n n C17 C16 NGI sing 292 n y C16 H16 NGI sing 293 n n C18 C17 NGI sing 294 n n C17 C21 NGI doub 295 n y C18 C19 NGI sing 296 n n C18 H18 NGI sing 297 n n C18 H18A NGI sing 298 n n C20 C19 NGI sing 299 n n C19 H19 NGI sing 300 n n C19 H19A NGI sing 301 n n C21 C22 NGI sing 302 n y C21 H21 NGI sing 303 n n C22 H22 NGI sing 304 n n # _atom_sites.entry_id 4UHR _atom_sites.fract_transf_matrix[1][1] 0.016554 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000818 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016896 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01539 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NGI A 1 1320 1320 NGI NGI . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NGI . . . B 2 -15.414 11.699 -33.532 1 46.72 ? C1 NGI 1320 A 1 HETATM 2 N N1 NGI . . . B 2 -16.571 10.166 -35.076 1 48.32 ? N1 NGI 1320 A 1 HETATM 3 O O1 NGI . . . B 2 -15.826 8.338 -36.18 1 49.65 ? O1 NGI 1320 A 1 HETATM 4 C C2 NGI . . . B 2 -15.431 10.333 -34.189 1 47.17 ? C2 NGI 1320 A 1 HETATM 5 N N2 NGI . . . B 2 -17.673 7.87 -39.608 1 53.94 ? N2 NGI 1320 A 1 HETATM 6 O O2 NGI . . . B 2 -18.149 9.374 -37.796 1 51.82 ? O2 NGI 1320 A 1 HETATM 7 C C3 NGI . . . B 2 -16.726 9.113 -35.883 1 49.57 ? C3 NGI 1320 A 1 HETATM 8 N N3 NGI . . . B 2 -15.698 7.384 -40.453 1 54.62 ? N3 NGI 1320 A 1 HETATM 9 O O3 NGI . . . B 2 -20.63 7.444 -37.564 1 48.96 ? O3 NGI 1320 A 1 HETATM 10 C C4 NGI . . . B 2 -18.105 8.921 -36.437 1 50.66 ? C4 NGI 1320 A 1 HETATM 11 N N4 NGI . . . B 2 -15.353 6.021 -43.114 1 56.47 ? N4 NGI 1320 A 1 HETATM 12 O O4 NGI . . . B 2 -19.324 7.106 -35.338 1 52.65 ? O4 NGI 1320 A 1 HETATM 13 C C5 NGI . . . B 2 -18.712 8.379 -38.665 1 53.04 ? C5 NGI 1320 A 1 HETATM 14 N N5 NGI . . . B 2 -17.693 6.025 -43.234 1 56.67 ? N5 NGI 1320 A 1 HETATM 15 O O5 NGI . . . B 2 -20.201 2.308 -53.506 1 89.76 ? O5 NGI 1320 A 1 HETATM 16 C C6 NGI . . . B 2 -19.225 7.261 -37.768 1 51.46 ? C6 NGI 1320 A 1 HETATM 17 N N6 NGI . . . B 2 -20.04 6.017 -43.389 1 61.17 ? N6 NGI 1320 A 1 HETATM 18 O O6 NGI . . . B 2 -21.93 2.779 -52.233 1 90.27 ? O6 NGI 1320 A 1 HETATM 19 C C7 NGI . . . B 2 -18.494 7.449 -36.455 1 51.35 ? C7 NGI 1320 A 1 HETATM 20 N N7 NGI . . . B 2 -19 6.948 -41.499 1 56.54 ? N7 NGI 1320 A 1 HETATM 21 C C8 NGI . . . B 2 -16.348 7.934 -39.404 1 54.2 ? C8 NGI 1320 A 1 HETATM 22 C C9 NGI . . . B 2 -16.633 6.963 -41.329 1 55.73 ? C9 NGI 1320 A 1 HETATM 23 C C10 NGI . . . B 2 -16.556 6.33 -42.569 1 56.3 ? C10 NGI 1320 A 1 HETATM 24 C C11 NGI . . . B 2 -18.908 6.33 -42.709 1 58.29 ? C11 NGI 1320 A 1 HETATM 25 C C12 NGI . . . B 2 -20.027 5.792 -44.826 1 66.5 ? C12 NGI 1320 A 1 HETATM 26 C C13 NGI . . . B 2 -20.373 4.338 -45.208 1 72.81 ? C13 NGI 1320 A 1 HETATM 27 C C14 NGI . . . B 2 -19.981 4.013 -46.64 1 78.53 ? C14 NGI 1320 A 1 HETATM 28 C C15 NGI . . . B 2 -19.106 4.836 -47.373 1 81.2 ? C15 NGI 1320 A 1 HETATM 29 C C16 NGI . . . B 2 -18.766 4.506 -48.688 1 83.84 ? C16 NGI 1320 A 1 HETATM 30 C C17 NGI . . . B 2 -19.302 3.35 -49.284 1 83.84 ? C17 NGI 1320 A 1 HETATM 31 C C18 NGI . . . B 2 -18.944 2.973 -50.709 1 84.87 ? C18 NGI 1320 A 1 HETATM 32 C C19 NGI . . . B 2 -19.741 3.805 -51.712 1 87.44 ? C19 NGI 1320 A 1 HETATM 33 C C20 NGI . . . B 2 -20.641 2.914 -52.54 1 89.44 ? C20 NGI 1320 A 1 HETATM 34 C C21 NGI . . . B 2 -20.171 2.53 -48.553 1 82.71 ? C21 NGI 1320 A 1 HETATM 35 C C22 NGI . . . B 2 -20.511 2.86 -47.239 1 80.33 ? C22 NGI 1320 A 1 HETATM 36 C C23 NGI . . . B 2 -17.88 7.274 -40.795 1 55.13 ? C23 NGI 1320 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #