data_4UHW # _model_server_result.job_id syk3Nyt3NoAlliSUlGx0AQ _model_server_result.datetime_utc '2024-11-24 21:52:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uhw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":3003}' # _entry.id 4UHW # _exptl.entry_id 4UHW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 395.352 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4UHW _cell.length_a 148.93 _cell.length_b 148.93 _cell.length_c 133.25 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UHW _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_554 y,x,-z-1 0 1 0 1 0 0 0 0 -1 0 0 -133.25 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 49 A CYS 49 1_555 E FE1 FES . A FES 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc2 A SG CYS 52 A CYS 52 1_555 E FE2 FES . A FES 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc3 A SG CYS 74 A CYS 74 1_555 E FE2 FES . A FES 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc4 A SG CYS 114 A CYS 114 1_555 D FE2 FES . A FES 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc5 A SG CYS 117 A CYS 117 1_555 D FE1 FES . A FES 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc6 A SG CYS 149 A CYS 149 1_555 D FE1 FES . A FES 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc7 A SG CYS 151 A CYS 151 1_555 D FE2 FES . A FES 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc8 F S2' MTE . A MTE 3003 1_555 G MO MOS . A MOS 3004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc9 F S1' MTE . A MTE 3003 1_555 G MO MOS . A MOS 3004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? # _chem_comp.formula 'C10 H14 N5 O6 P S2' _chem_comp.formula_weight 395.352 _chem_comp.id MTE _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 MTE doub 344 n y N1 C10 MTE sing 345 n y C2 N2 MTE sing 346 n n C2 N3 MTE sing 347 n y N2 HN21 MTE sing 348 n n N2 HN22 MTE sing 349 n n N3 C4 MTE sing 350 n y N3 HN3 MTE sing 351 n n C4 O4 MTE doub 352 n n C4 C9 MTE sing 353 n y N5 C6 MTE sing 354 n n N5 C9 MTE sing 355 n n N5 HN5 MTE sing 356 n n C6 C7 MTE sing 357 n n C6 C1' MTE sing 358 n n C6 H6 MTE sing 359 n n C7 N8 MTE sing 360 n n C7 O3' MTE sing 361 n n C7 H7 MTE sing 362 n n N8 C10 MTE sing 363 n n N8 HN8 MTE sing 364 n n C9 C10 MTE doub 365 n y C1' S1' MTE sing 366 n n C1' C2' MTE doub 367 n n S1' H1S MTE sing 368 n n C2' S2' MTE sing 369 n n C2' C3' MTE sing 370 n n S2' H2S MTE sing 371 n n C3' O3' MTE sing 372 n n C3' C4' MTE sing 373 n n C3' H3' MTE sing 374 n n C4' O4' MTE sing 375 n n C4' "H4'1" MTE sing 376 n n C4' "H4'2" MTE sing 377 n n O4' P MTE sing 378 n n P O1P MTE doub 379 n n P O2P MTE sing 380 n n P O3P MTE sing 381 n n O2P HOP2 MTE sing 382 n n O3P HOP3 MTE sing 383 n n # _atom_sites.entry_id 4UHW _atom_sites.fract_transf_matrix[1][1] 0.006715 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006715 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007505 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MLI A 1 2337 2337 MLI MLI . C 2 MLI A 1 2338 2338 MLI MLI . D 3 FES A 1 3001 3001 FES FES . E 3 FES A 1 3002 3002 FES FES . F 4 MTE A 1 3003 3003 MTE MTE . G 5 MOS A 1 3004 3004 MOS MOS . H 6 FAD A 1 3006 3006 FAD FAD . I 7 HOH A 1 2001 2001 HOH HOH . I 7 HOH A 2 2002 2002 HOH HOH . I 7 HOH A 3 2003 2003 HOH HOH . I 7 HOH A 4 2004 2004 HOH HOH . I 7 HOH A 5 2005 2005 HOH HOH . I 7 HOH A 6 2006 2006 HOH HOH . I 7 HOH A 7 2007 2007 HOH HOH . I 7 HOH A 8 2008 2008 HOH HOH . I 7 HOH A 9 2009 2009 HOH HOH . I 7 HOH A 10 2010 2010 HOH HOH . I 7 HOH A 11 2011 2011 HOH HOH . I 7 HOH A 12 2012 2012 HOH HOH . I 7 HOH A 13 2013 2013 HOH HOH . I 7 HOH A 14 2014 2014 HOH HOH . I 7 HOH A 15 2015 2015 HOH HOH . I 7 HOH A 16 2016 2016 HOH HOH . I 7 HOH A 17 2017 2017 HOH HOH . I 7 HOH A 18 2018 2018 HOH HOH . I 7 HOH A 19 2019 2019 HOH HOH . I 7 HOH A 20 2020 2020 HOH HOH . I 7 HOH A 21 2021 2021 HOH HOH . I 7 HOH A 22 2022 2022 HOH HOH . I 7 HOH A 23 2023 2023 HOH HOH . I 7 HOH A 24 2024 2024 HOH HOH . I 7 HOH A 25 2025 2025 HOH HOH . I 7 HOH A 26 2026 2026 HOH HOH . I 7 HOH A 27 2027 2027 HOH HOH . I 7 HOH A 28 2028 2028 HOH HOH . I 7 HOH A 29 2029 2029 HOH HOH . I 7 HOH A 30 2030 2030 HOH HOH . I 7 HOH A 31 2031 2031 HOH HOH . I 7 HOH A 32 2032 2032 HOH HOH . I 7 HOH A 33 2033 2033 HOH HOH . I 7 HOH A 34 2034 2034 HOH HOH . I 7 HOH A 35 2035 2035 HOH HOH . I 7 HOH A 36 2036 2036 HOH HOH . I 7 HOH A 37 2037 2037 HOH HOH . I 7 HOH A 38 2038 2038 HOH HOH . I 7 HOH A 39 2039 2039 HOH HOH . I 7 HOH A 40 2040 2040 HOH HOH . I 7 HOH A 41 2041 2041 HOH HOH . I 7 HOH A 42 2042 2042 HOH HOH . I 7 HOH A 43 2043 2043 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 MTE . . . F 4 -36.963 -14.549 -45.965 1 75.7 ? N1 MTE 3003 A 1 HETATM 2 C C2 MTE . . . F 4 -37.647 -15.588 -46.506 1 75.09 ? C2 MTE 3003 A 1 HETATM 3 N N2 MTE . . . F 4 -38.816 -15.305 -47.132 1 76.41 ? N2 MTE 3003 A 1 HETATM 4 N N3 MTE . . . F 4 -37.2 -16.869 -46.442 1 75.97 ? N3 MTE 3003 A 1 HETATM 5 C C4 MTE . . . F 4 -36.04 -17.202 -45.829 1 76.22 ? C4 MTE 3003 A 1 HETATM 6 O O4 MTE . . . F 4 -35.641 -18.387 -45.77 1 72.04 ? O4 MTE 3003 A 1 HETATM 7 N N5 MTE . . . F 4 -34.089 -16.319 -44.535 1 79.02 ? N5 MTE 3003 A 1 HETATM 8 C C6 MTE . . . F 4 -33.594 -15.25 -43.669 1 80.68 ? C6 MTE 3003 A 1 HETATM 9 C C7 MTE . . . F 4 -33.728 -13.887 -44.336 1 80.97 ? C7 MTE 3003 A 1 HETATM 10 N N8 MTE . . . F 4 -35.092 -13.713 -44.813 1 78.71 ? N8 MTE 3003 A 1 HETATM 11 C C9 MTE . . . F 4 -35.232 -16.115 -45.224 1 77.83 ? C9 MTE 3003 A 1 HETATM 12 C C10 MTE . . . F 4 -35.792 -14.745 -45.319 1 78.41 ? C10 MTE 3003 A 1 HETATM 13 C C1' MTE . . . F 4 -32.18 -15.462 -43.231 1 81.34 ? C1' MTE 3003 A 1 HETATM 14 S S1' MTE . . . F 4 -31.956 -16.534 -41.949 1 80.69 ? S1' MTE 3003 A 1 HETATM 15 C C2' MTE . . . F 4 -31.159 -14.818 -43.822 1 84.27 ? C2' MTE 3003 A 1 HETATM 16 S S2' MTE . . . F 4 -29.569 -15.117 -43.313 1 83.39 ? S2' MTE 3003 A 1 HETATM 17 C C3' MTE . . . F 4 -31.403 -13.808 -44.93 1 83.75 ? C3' MTE 3003 A 1 HETATM 18 O O3' MTE . . . F 4 -32.767 -13.822 -45.401 1 82.25 ? O3' MTE 3003 A 1 HETATM 19 C C4' MTE . . . F 4 -30.425 -14.078 -46.081 1 83.15 ? C4' MTE 3003 A 1 HETATM 20 O O4' MTE . . . F 4 -30.74 -13.314 -47.249 1 80.96 ? O4' MTE 3003 A 1 HETATM 21 P P MTE . . . F 4 -30.243 -11.788 -47.439 1 78.91 ? P MTE 3003 A 1 HETATM 22 O O1P MTE . . . F 4 -30.34 -11.52 -48.924 1 76.73 ? O1P MTE 3003 A 1 HETATM 23 O O2P MTE . . . F 4 -28.827 -11.78 -46.922 1 76.2 ? O2P MTE 3003 A 1 HETATM 24 O O3P MTE . . . F 4 -31.223 -10.983 -46.613 1 80.06 ? O3P MTE 3003 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 232 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #