data_4UII
#
_model_server_result.job_id            dfuGdQSnj1dLvDZsqol9kA 
_model_server_result.datetime_utc      '2025-03-13 17:02:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4uii 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":200}' 
#
_entry.id    4UII 
#
_exptl.entry_id    4UII 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.81 
_cell.angle_gamma         90 
_cell.entry_id            4UII 
_cell.length_a            47.89 
_cell.length_b            49.49 
_cell.length_c            62.77 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4UII 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 148 A HIS 101 1_555 C FE HEM . A HEM 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? 
metalc ? metalc2 B NE2 HIS 148 B HIS 101 1_555 D FE HEM . B HEM 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 116 n n 
CHA C4D HEM doub 117 n n 
CHA HHA HEM sing 118 n n 
CHB C4A HEM sing 119 n n 
CHB C1B HEM doub 120 n n 
CHB HHB HEM sing 121 n n 
CHC C4B HEM sing 122 n n 
CHC C1C HEM doub 123 n n 
CHC HHC HEM sing 124 n n 
CHD C4C HEM doub 125 n n 
CHD C1D HEM sing 126 n n 
CHD HHD HEM sing 127 n n 
C1A C2A HEM doub 128 n y 
C1A NA HEM sing 129 n y 
C2A C3A HEM sing 130 n y 
C2A CAA HEM sing 131 n n 
C3A C4A HEM doub 132 n y 
C3A CMA HEM sing 133 n n 
C4A NA HEM sing 134 n y 
CMA HMA HEM sing 135 n n 
CMA HMAA HEM sing 136 n n 
CMA HMAB HEM sing 137 n n 
CAA CBA HEM sing 138 n n 
CAA HAA HEM sing 139 n n 
CAA HAAA HEM sing 140 n n 
CBA CGA HEM sing 141 n n 
CBA HBA HEM sing 142 n n 
CBA HBAA HEM sing 143 n n 
CGA O1A HEM doub 144 n n 
CGA O2A HEM sing 145 n n 
C1B C2B HEM sing 146 n n 
C1B NB HEM sing 147 n n 
C2B C3B HEM doub 148 n n 
C2B CMB HEM sing 149 n n 
C3B C4B HEM sing 150 n n 
C3B CAB HEM sing 151 n n 
C4B NB HEM doub 152 n n 
CMB HMB HEM sing 153 n n 
CMB HMBA HEM sing 154 n n 
CMB HMBB HEM sing 155 n n 
CAB CBB HEM doub 156 n n 
CAB HAB HEM sing 157 n n 
CBB HBB HEM sing 158 n n 
CBB HBBA HEM sing 159 n n 
C1C C2C HEM sing 160 n y 
C1C NC HEM sing 161 n y 
C2C C3C HEM doub 162 n y 
C2C CMC HEM sing 163 n n 
C3C C4C HEM sing 164 n y 
C3C CAC HEM sing 165 n n 
C4C NC HEM sing 166 n y 
CMC HMC HEM sing 167 n n 
CMC HMCA HEM sing 168 n n 
CMC HMCB HEM sing 169 n n 
CAC CBC HEM doub 170 n n 
CAC HAC HEM sing 171 n n 
CBC HBC HEM sing 172 n n 
CBC HBCA HEM sing 173 n n 
C1D C2D HEM sing 174 n n 
C1D ND HEM doub 175 n n 
C2D C3D HEM doub 176 n n 
C2D CMD HEM sing 177 n n 
C3D C4D HEM sing 178 n n 
C3D CAD HEM sing 179 n n 
C4D ND HEM sing 180 n n 
CMD HMD HEM sing 181 n n 
CMD HMDA HEM sing 182 n n 
CMD HMDB HEM sing 183 n n 
CAD CBD HEM sing 184 n n 
CAD HAD HEM sing 185 n n 
CAD HADA HEM sing 186 n n 
CBD CGD HEM sing 187 n n 
CBD HBD HEM sing 188 n n 
CBD HBDA HEM sing 189 n n 
CGD O1D HEM doub 190 n n 
CGD O2D HEM sing 191 n n 
O2A H2A HEM sing 192 n n 
O2D H2D HEM sing 193 n n 
FE NA HEM sing 194 n n 
FE NB HEM sing 195 n n 
FE NC HEM sing 196 n n 
FE ND HEM sing 197 n n 
#
_atom_sites.entry_id                     4UII 
_atom_sites.fract_transf_matrix[1][1]    0.020881 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00066 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020206 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015939 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 200 200 HEM HEM . 
D 2 HEM B 1 200 200 HEM HEM . 
E 3 HOH A 1 2001 2001 HOH HOH . 
E 3 HOH A 2 2002 2002 HOH HOH . 
F 3 HOH B 1 2001 2001 HOH HOH . 
F 3 HOH B 2 2002 2002 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . D 2 23.718 -59.287 25.263 1 100.63 ? CHA HEM 200 B 1 
HETATM 2 C CHB HEM . . . D 2 21.522 -58.256 21.106 1 94.13 ? CHB HEM 200 B 1 
HETATM 3 C CHC HEM . . . D 2 21.812 -53.524 22.005 1 88.77 ? CHC HEM 200 B 1 
HETATM 4 C CHD HEM . . . D 2 24.902 -54.519 25.495 1 101.21 ? CHD HEM 200 B 1 
HETATM 5 C C1A HEM . . . D 2 23.026 -59.454 24.095 1 99.53 ? C1A HEM 200 B 1 
HETATM 6 C C2A HEM . . . D 2 22.488 -60.688 23.539 1 95.94 ? C2A HEM 200 B 1 
HETATM 7 C C3A HEM . . . D 2 21.889 -60.365 22.399 1 93.72 ? C3A HEM 200 B 1 
HETATM 8 C C4A HEM . . . D 2 22.023 -58.945 22.181 1 94.04 ? C4A HEM 200 B 1 
HETATM 9 C CMA HEM . . . D 2 21.187 -61.347 21.444 1 91.14 ? CMA HEM 200 B 1 
HETATM 10 C CAA HEM . . . D 2 22.525 -62.143 24.073 1 98.26 ? CAA HEM 200 B 1 
HETATM 11 C CBA HEM . . . D 2 23.824 -62.606 24.732 1 96.7 ? CBA HEM 200 B 1 
HETATM 12 C CGA HEM . . . D 2 23.617 -64.01 25.274 1 96.83 ? CGA HEM 200 B 1 
HETATM 13 O O1A HEM . . . D 2 22.521 -64.594 25.06 1 91.8 ? O1A HEM 200 B 1 
HETATM 14 O O2A HEM . . . D 2 24.536 -64.57 25.926 1 95.17 ? O2A HEM 200 B 1 
HETATM 15 C C1B HEM . . . D 2 21.332 -56.897 21.041 1 91.69 ? C1B HEM 200 B 1 
HETATM 16 C C2B HEM . . . D 2 20.507 -56.21 20.066 1 84.01 ? C2B HEM 200 B 1 
HETATM 17 C C3B HEM . . . D 2 20.581 -54.891 20.323 1 88.94 ? C3B HEM 200 B 1 
HETATM 18 C C4B HEM . . . D 2 21.475 -54.727 21.448 1 88.01 ? C4B HEM 200 B 1 
HETATM 19 C CMB HEM . . . D 2 19.695 -56.939 18.977 1 79.99 ? CMB HEM 200 B 1 
HETATM 20 C CAB HEM . . . D 2 19.936 -53.674 19.605 1 89.66 ? CAB HEM 200 B 1 
HETATM 21 C CBB HEM . . . D 2 19.594 -53.664 18.312 1 83.82 ? CBB HEM 200 B 1 
HETATM 22 C C1C HEM . . . D 2 22.76 -53.378 22.977 1 92.37 ? C1C HEM 200 B 1 
HETATM 23 C C2C HEM . . . D 2 23.39 -52.133 23.35 1 95.2 ? C2C HEM 200 B 1 
HETATM 24 C C3C HEM . . . D 2 24.258 -52.389 24.331 1 95.19 ? C3C HEM 200 B 1 
HETATM 25 C C4C HEM . . . D 2 24.188 -53.816 24.589 1 92.09 ? C4C HEM 200 B 1 
HETATM 26 C CMC HEM . . . D 2 23.086 -50.757 22.713 1 93.35 ? CMC HEM 200 B 1 
HETATM 27 C CAC HEM . . . D 2 25.141 -51.319 25.022 1 99.39 ? CAC HEM 200 B 1 
HETATM 28 C CBC HEM . . . D 2 25.988 -51.587 26.023 1 105.65 ? CBC HEM 200 B 1 
HETATM 29 C C1D HEM . . . D 2 24.801 -55.857 25.767 1 104.52 ? C1D HEM 200 B 1 
HETATM 30 C C2D HEM . . . D 2 25.469 -56.445 26.898 1 111.67 ? C2D HEM 200 B 1 
HETATM 31 C C3D HEM . . . D 2 25.104 -57.933 26.854 1 113.39 ? C3D HEM 200 B 1 
HETATM 32 C C4D HEM . . . D 2 24.266 -58.093 25.683 1 103.3 ? C4D HEM 200 B 1 
HETATM 33 C CMD HEM . . . D 2 26.344 -55.683 27.921 1 118.51 ? CMD HEM 200 B 1 
HETATM 34 C CAD HEM . . . D 2 25.586 -59.009 27.858 1 128.43 ? CAD HEM 200 B 1 
HETATM 35 C CBD HEM . . . D 2 24.491 -59.957 28.369 1 125.54 ? CBD HEM 200 B 1 
HETATM 36 C CGD HEM . . . D 2 25.104 -61.295 28.742 1 128.4 ? CGD HEM 200 B 1 
HETATM 37 O O1D HEM . . . D 2 24.912 -62.279 27.97 1 124.26 ? O1D HEM 200 B 1 
HETATM 38 O O2D HEM . . . D 2 25.78 -61.381 29.808 1 138.3 ? O2D HEM 200 B 1 
HETATM 39 N NA HEM . . . D 2 22.725 -58.414 23.235 1 95.24 ? NA HEM 200 B 1 
HETATM 40 N NB HEM . . . D 2 21.915 -55.964 21.87 1 91.69 ? NB HEM 200 B 1 
HETATM 41 N NC HEM . . . D 2 23.272 -54.395 23.755 1 88.3 ? NC HEM 200 B 1 
HETATM 42 N ND HEM . . . D 2 24.108 -56.843 25.072 1 101.28 ? ND HEM 200 B 1 
HETATM 43 FE FE HEM . . . D 2 23.202 -56.419 23.318 1 90.67 ? FE HEM 200 B 1 
#
_model_server_stats.io_time_ms              37 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           43 
#