data_4URO
#
_model_server_result.job_id            LuaNQqjm5PYdNRV57-GneQ 
_model_server_result.datetime_utc      '2024-11-16 17:32:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4uro 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":2000}' 
#
_entry.id    4URO 
#
_exptl.entry_id    4URO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              612.624 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NOVOBIOCIN 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.72 
_cell.angle_gamma         90 
_cell.entry_id            4URO 
_cell.length_a            74.28 
_cell.length_b            68.59 
_cell.length_c            85.72 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4URO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,I 1 1 
B,F,J 2 1 
C,G,K 3 1 
D,H,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C31 H36 N2 O11' 
_chem_comp.formula_weight    612.624 
_chem_comp.id                NOV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NOVOBIOCIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '4-Hydroxy-3-[4-hydroxy-3-(3-methylbut-2-enyl)benzamido]-8-methylcoumarin-7-yl 3-O-carbamoyl-5,5-di-C-methyl-alpha-l-lyxofuranoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 NOV sing 224 n n 
C1 H11A NOV sing 225 n n 
C1 H12 NOV sing 226 n n 
C1 H13 NOV sing 227 n n 
O1 C27 NOV sing 228 n n 
N1 C12 NOV sing 229 n n 
N1 HN11 NOV sing 230 n n 
N1 HN12 NOV sing 231 n n 
C12 O4 NOV doub 232 n n 
C12 O5 NOV sing 233 n n 
O5 C28 NOV sing 234 n n 
C27 C28 NOV sing 235 n n 
C27 C31 NOV sing 236 n n 
C27 H27 NOV sing 237 n n 
C28 C29 NOV sing 238 n n 
C28 H28 NOV sing 239 n n 
C29 O6 NOV sing 240 n n 
C29 C30 NOV sing 241 n n 
C29 H29 NOV sing 242 n n 
O6 HO6 NOV sing 243 n n 
C30 O7 NOV sing 244 n n 
C30 O8 NOV sing 245 n n 
C30 H30 NOV sing 246 n n 
O7 C31 NOV sing 247 n n 
C31 C23 NOV sing 248 n n 
C31 C26 NOV sing 249 n n 
C23 H231 NOV sing 250 n n 
C23 H232 NOV sing 251 n n 
C23 H233 NOV sing 252 n n 
C26 H261 NOV sing 253 n n 
C26 H262 NOV sing 254 n n 
C26 H263 NOV sing 255 n n 
O8 C3 NOV sing 256 n n 
C3 C4 NOV doub 257 n y 
C3 C11 NOV sing 258 n y 
C4 C2 NOV sing 259 n n 
C4 C5 NOV sing 260 n y 
C2 H21A NOV sing 261 n n 
C2 H22 NOV sing 262 n n 
C2 H23 NOV sing 263 n n 
C5 C9 NOV doub 264 n y 
C5 O10 NOV sing 265 n n 
C9 C10 NOV sing 266 n y 
C9 C8 NOV sing 267 n n 
C10 C11 NOV doub 268 n y 
C10 H10 NOV sing 269 n n 
C11 H11 NOV sing 270 n n 
O10 C6 NOV sing 271 n n 
C6 O11 NOV doub 272 n n 
C6 C7 NOV sing 273 n n 
C7 C8 NOV doub 274 n n 
C7 N2 NOV sing 275 n n 
C8 O9 NOV sing 276 n n 
O9 HO9 NOV sing 277 n n 
N2 C13 NOV sing 278 n n 
N2 HN2 NOV sing 279 n n 
C13 O2 NOV doub 280 n n 
C13 C14 NOV sing 281 n n 
C14 C15 NOV doub 282 n y 
C14 C19 NOV sing 283 n y 
C15 C16 NOV sing 284 n y 
C15 H15 NOV sing 285 n n 
C16 C17 NOV doub 286 n y 
C16 C20 NOV sing 287 n n 
C17 O3 NOV sing 288 n n 
C17 C18 NOV sing 289 n y 
O3 HO3 NOV sing 290 n n 
C18 C19 NOV doub 291 n y 
C18 H18 NOV sing 292 n n 
C19 H19 NOV sing 293 n n 
C20 C21 NOV sing 294 n n 
C20 H201 NOV sing 295 n n 
C20 H202 NOV sing 296 n n 
C21 C22 NOV doub 297 n n 
C21 H21 NOV sing 298 n n 
C22 C24 NOV sing 299 n n 
C22 C25 NOV sing 300 n n 
C24 H241 NOV sing 301 n n 
C24 H242 NOV sing 302 n n 
C24 H243 NOV sing 303 n n 
C25 H251 NOV sing 304 n n 
C25 H252 NOV sing 305 n n 
C25 H253 NOV sing 306 n n 
#
_atom_sites.entry_id                     4URO 
_atom_sites.fract_transf_matrix[1][1]    0.013463 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000404 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014579 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011671 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NOV A 1 2000 2000 NOV NOV . 
F 2 NOV B 1 2000 2000 NOV NOV . 
G 2 NOV C 1 2000 2000 NOV NOV . 
H 2 NOV D 1 2000 2000 NOV NOV . 
I 3 HOH A 1 2001 2001 HOH HOH . 
I 3 HOH A 2 2002 2002 HOH HOH . 
I 3 HOH A 3 2003 2003 HOH HOH . 
I 3 HOH A 4 2004 2004 HOH HOH . 
I 3 HOH A 5 2005 2005 HOH HOH . 
I 3 HOH A 6 2006 2006 HOH HOH . 
I 3 HOH A 7 2007 2007 HOH HOH . 
I 3 HOH A 8 2008 2008 HOH HOH . 
I 3 HOH A 9 2009 2009 HOH HOH . 
I 3 HOH A 10 2010 2010 HOH HOH . 
I 3 HOH A 11 2011 2011 HOH HOH . 
I 3 HOH A 12 2012 2012 HOH HOH . 
I 3 HOH A 13 2013 2013 HOH HOH . 
I 3 HOH A 14 2014 2014 HOH HOH . 
I 3 HOH A 15 2015 2015 HOH HOH . 
I 3 HOH A 16 2016 2016 HOH HOH . 
I 3 HOH A 17 2017 2017 HOH HOH . 
I 3 HOH A 18 2018 2018 HOH HOH . 
I 3 HOH A 19 2019 2019 HOH HOH . 
I 3 HOH A 20 2020 2020 HOH HOH . 
I 3 HOH A 21 2021 2021 HOH HOH . 
J 3 HOH B 1 2001 2001 HOH HOH . 
J 3 HOH B 2 2002 2002 HOH HOH . 
J 3 HOH B 3 2003 2003 HOH HOH . 
J 3 HOH B 4 2004 2004 HOH HOH . 
J 3 HOH B 5 2005 2005 HOH HOH . 
J 3 HOH B 6 2006 2006 HOH HOH . 
J 3 HOH B 7 2007 2007 HOH HOH . 
J 3 HOH B 8 2008 2008 HOH HOH . 
J 3 HOH B 9 2009 2009 HOH HOH . 
J 3 HOH B 10 2010 2010 HOH HOH . 
J 3 HOH B 11 2011 2011 HOH HOH . 
J 3 HOH B 12 2012 2012 HOH HOH . 
J 3 HOH B 13 2013 2013 HOH HOH . 
J 3 HOH B 14 2014 2014 HOH HOH . 
J 3 HOH B 15 2015 2015 HOH HOH . 
J 3 HOH B 16 2016 2016 HOH HOH . 
J 3 HOH B 17 2017 2017 HOH HOH . 
J 3 HOH B 18 2018 2018 HOH HOH . 
J 3 HOH B 19 2019 2019 HOH HOH . 
J 3 HOH B 20 2020 2020 HOH HOH . 
J 3 HOH B 21 2021 2021 HOH HOH . 
J 3 HOH B 22 2022 2022 HOH HOH . 
J 3 HOH B 23 2023 2023 HOH HOH . 
J 3 HOH B 24 2024 2024 HOH HOH . 
J 3 HOH B 25 2025 2025 HOH HOH . 
J 3 HOH B 26 2026 2026 HOH HOH . 
K 3 HOH C 1 2001 2001 HOH HOH . 
K 3 HOH C 2 2002 2002 HOH HOH . 
K 3 HOH C 3 2003 2003 HOH HOH . 
K 3 HOH C 4 2004 2004 HOH HOH . 
K 3 HOH C 5 2005 2005 HOH HOH . 
K 3 HOH C 6 2006 2006 HOH HOH . 
K 3 HOH C 7 2007 2007 HOH HOH . 
K 3 HOH C 8 2008 2008 HOH HOH . 
K 3 HOH C 9 2009 2009 HOH HOH . 
K 3 HOH C 10 2010 2010 HOH HOH . 
L 3 HOH D 1 2001 2001 HOH HOH . 
L 3 HOH D 2 2002 2002 HOH HOH . 
L 3 HOH D 3 2003 2003 HOH HOH . 
L 3 HOH D 4 2004 2004 HOH HOH . 
L 3 HOH D 5 2005 2005 HOH HOH . 
L 3 HOH D 6 2006 2006 HOH HOH . 
L 3 HOH D 7 2007 2007 HOH HOH . 
L 3 HOH D 8 2008 2008 HOH HOH . 
L 3 HOH D 9 2009 2009 HOH HOH . 
L 3 HOH D 10 2010 2010 HOH HOH . 
L 3 HOH D 11 2011 2011 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NOV . . . F 2 36.159 -10.424 12.114 1 30.45 ? C1 NOV 2000 B 1 
HETATM 2 O O1 NOV . . . F 2 35.899 -11.821 12.08 1 30.56 ? O1 NOV 2000 B 1 
HETATM 3 N N1 NOV . . . F 2 36.129 -11.902 7.554 1 17.82 ? N1 NOV 2000 B 1 
HETATM 4 C C12 NOV . . . F 2 36.234 -12.863 8.439 1 23.77 ? C12 NOV 2000 B 1 
HETATM 5 O O4 NOV . . . F 2 35.855 -14.002 8.286 1 29.64 ? O4 NOV 2000 B 1 
HETATM 6 O O5 NOV . . . F 2 36.827 -12.417 9.547 1 28.09 ? O5 NOV 2000 B 1 
HETATM 7 C C27 NOV . . . F 2 37.056 -12.643 11.953 1 29.63 ? C27 NOV 2000 B 1 
HETATM 8 C C28 NOV . . . F 2 37.058 -13.366 10.61 1 29.16 ? C28 NOV 2000 B 1 
HETATM 9 C C29 NOV . . . F 2 38.327 -14.2 10.439 1 31.38 ? C29 NOV 2000 B 1 
HETATM 10 O O6 NOV . . . F 2 39.525 -13.42 10.461 1 30.18 ? O6 NOV 2000 B 1 
HETATM 11 C C30 NOV . . . F 2 38.36 -15.281 11.518 1 34.11 ? C30 NOV 2000 B 1 
HETATM 12 O O7 NOV . . . F 2 38.169 -14.733 12.837 1 36.36 ? O7 NOV 2000 B 1 
HETATM 13 C C31 NOV . . . F 2 37.185 -13.702 13.14 1 31.59 ? C31 NOV 2000 B 1 
HETATM 14 C C23 NOV . . . F 2 35.869 -14.401 13.457 1 32.8 ? C23 NOV 2000 B 1 
HETATM 15 C C26 NOV . . . F 2 37.703 -12.984 14.372 1 24.54 ? C26 NOV 2000 B 1 
HETATM 16 O O8 NOV . . . F 2 37.29 -16.149 11.22 1 35.31 ? O8 NOV 2000 B 1 
HETATM 17 C C3 NOV . . . F 2 37.217 -17.391 11.806 1 34.23 ? C3 NOV 2000 B 1 
HETATM 18 C C4 NOV . . . F 2 36.093 -18.138 11.421 1 31.2 ? C4 NOV 2000 B 1 
HETATM 19 C C2 NOV . . . F 2 35.111 -17.598 10.408 1 25.66 ? C2 NOV 2000 B 1 
HETATM 20 C C5 NOV . . . F 2 35.931 -19.396 12.005 1 34.12 ? C5 NOV 2000 B 1 
HETATM 21 C C9 NOV . . . F 2 36.845 -19.914 12.931 1 36.39 ? C9 NOV 2000 B 1 
HETATM 22 C C10 NOV . . . F 2 37.951 -19.134 13.279 1 34.31 ? C10 NOV 2000 B 1 
HETATM 23 C C11 NOV . . . F 2 38.144 -17.883 12.725 1 32.67 ? C11 NOV 2000 B 1 
HETATM 24 O O10 NOV . . . F 2 34.817 -20.111 11.6 1 33.44 ? O10 NOV 2000 B 1 
HETATM 25 C C6 NOV . . . F 2 34.528 -21.372 12.061 1 35.03 ? C6 NOV 2000 B 1 
HETATM 26 O O11 NOV . . . F 2 33.551 -21.877 11.572 1 32.99 ? O11 NOV 2000 B 1 
HETATM 27 C C7 NOV . . . F 2 35.5 -21.964 13.094 1 40.25 ? C7 NOV 2000 B 1 
HETATM 28 C C8 NOV . . . F 2 36.594 -21.247 13.479 1 37.86 ? C8 NOV 2000 B 1 
HETATM 29 O O9 NOV . . . F 2 37.458 -21.69 14.401 1 35.7 ? O9 NOV 2000 B 1 
HETATM 30 N N2 NOV . . . F 2 35.055 -23.2 13.647 1 43.05 ? N2 NOV 2000 B 1 
HETATM 31 C C13 NOV . . . F 2 33.799 -23.465 14.154 1 37.23 ? C13 NOV 2000 B 1 
HETATM 32 O O2 NOV . . . F 2 33.143 -24.445 13.809 1 41.05 ? O2 NOV 2000 B 1 
HETATM 33 C C14 NOV . . . F 2 33.262 -22.484 15.145 1 26.25 ? C14 NOV 2000 B 1 
HETATM 34 C C15 NOV . . . F 2 34.117 -21.663 15.876 1 22.85 ? C15 NOV 2000 B 1 
HETATM 35 C C16 NOV . . . F 2 33.631 -20.771 16.832 1 25.07 ? C16 NOV 2000 B 1 
HETATM 36 C C17 NOV . . . F 2 32.248 -20.71 17.041 1 27.39 ? C17 NOV 2000 B 1 
HETATM 37 O O3 NOV . . . F 2 31.742 -19.844 17.955 1 31.27 ? O3 NOV 2000 B 1 
HETATM 38 C C18 NOV . . . F 2 31.385 -21.52 16.302 1 25.66 ? C18 NOV 2000 B 1 
HETATM 39 C C19 NOV . . . F 2 31.89 -22.395 15.359 1 24.96 ? C19 NOV 2000 B 1 
HETATM 40 C C20 NOV . . . F 2 34.627 -19.911 17.58 1 28.53 ? C20 NOV 2000 B 1 
HETATM 41 C C21 NOV . . . F 2 34.402 -18.46 17.256 1 35.66 ? C21 NOV 2000 B 1 
HETATM 42 C C22 NOV . . . F 2 35.224 -17.624 16.65 1 39.6 ? C22 NOV 2000 B 1 
HETATM 43 C C24 NOV . . . F 2 36.591 -18.001 16.167 1 42.26 ? C24 NOV 2000 B 1 
HETATM 44 C C25 NOV . . . F 2 34.849 -16.2 16.4 1 38.76 ? C25 NOV 2000 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           44 
#