data_4URO
#
_model_server_result.job_id            zQ_Baaa5897ug9Z3milDaQ 
_model_server_result.datetime_utc      '2024-11-16 17:49:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4uro 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":2000}' 
#
_entry.id    4URO 
#
_exptl.entry_id    4URO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              612.624 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NOVOBIOCIN 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.72 
_cell.angle_gamma         90 
_cell.entry_id            4URO 
_cell.length_a            74.28 
_cell.length_b            68.59 
_cell.length_c            85.72 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4URO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,I 1 1 
B,F,J 2 1 
C,G,K 3 1 
D,H,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C31 H36 N2 O11' 
_chem_comp.formula_weight    612.624 
_chem_comp.id                NOV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NOVOBIOCIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '4-Hydroxy-3-[4-hydroxy-3-(3-methylbut-2-enyl)benzamido]-8-methylcoumarin-7-yl 3-O-carbamoyl-5,5-di-C-methyl-alpha-l-lyxofuranoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 NOV sing 224 n n 
C1 H11A NOV sing 225 n n 
C1 H12 NOV sing 226 n n 
C1 H13 NOV sing 227 n n 
O1 C27 NOV sing 228 n n 
N1 C12 NOV sing 229 n n 
N1 HN11 NOV sing 230 n n 
N1 HN12 NOV sing 231 n n 
C12 O4 NOV doub 232 n n 
C12 O5 NOV sing 233 n n 
O5 C28 NOV sing 234 n n 
C27 C28 NOV sing 235 n n 
C27 C31 NOV sing 236 n n 
C27 H27 NOV sing 237 n n 
C28 C29 NOV sing 238 n n 
C28 H28 NOV sing 239 n n 
C29 O6 NOV sing 240 n n 
C29 C30 NOV sing 241 n n 
C29 H29 NOV sing 242 n n 
O6 HO6 NOV sing 243 n n 
C30 O7 NOV sing 244 n n 
C30 O8 NOV sing 245 n n 
C30 H30 NOV sing 246 n n 
O7 C31 NOV sing 247 n n 
C31 C23 NOV sing 248 n n 
C31 C26 NOV sing 249 n n 
C23 H231 NOV sing 250 n n 
C23 H232 NOV sing 251 n n 
C23 H233 NOV sing 252 n n 
C26 H261 NOV sing 253 n n 
C26 H262 NOV sing 254 n n 
C26 H263 NOV sing 255 n n 
O8 C3 NOV sing 256 n n 
C3 C4 NOV doub 257 n y 
C3 C11 NOV sing 258 n y 
C4 C2 NOV sing 259 n n 
C4 C5 NOV sing 260 n y 
C2 H21A NOV sing 261 n n 
C2 H22 NOV sing 262 n n 
C2 H23 NOV sing 263 n n 
C5 C9 NOV doub 264 n y 
C5 O10 NOV sing 265 n n 
C9 C10 NOV sing 266 n y 
C9 C8 NOV sing 267 n n 
C10 C11 NOV doub 268 n y 
C10 H10 NOV sing 269 n n 
C11 H11 NOV sing 270 n n 
O10 C6 NOV sing 271 n n 
C6 O11 NOV doub 272 n n 
C6 C7 NOV sing 273 n n 
C7 C8 NOV doub 274 n n 
C7 N2 NOV sing 275 n n 
C8 O9 NOV sing 276 n n 
O9 HO9 NOV sing 277 n n 
N2 C13 NOV sing 278 n n 
N2 HN2 NOV sing 279 n n 
C13 O2 NOV doub 280 n n 
C13 C14 NOV sing 281 n n 
C14 C15 NOV doub 282 n y 
C14 C19 NOV sing 283 n y 
C15 C16 NOV sing 284 n y 
C15 H15 NOV sing 285 n n 
C16 C17 NOV doub 286 n y 
C16 C20 NOV sing 287 n n 
C17 O3 NOV sing 288 n n 
C17 C18 NOV sing 289 n y 
O3 HO3 NOV sing 290 n n 
C18 C19 NOV doub 291 n y 
C18 H18 NOV sing 292 n n 
C19 H19 NOV sing 293 n n 
C20 C21 NOV sing 294 n n 
C20 H201 NOV sing 295 n n 
C20 H202 NOV sing 296 n n 
C21 C22 NOV doub 297 n n 
C21 H21 NOV sing 298 n n 
C22 C24 NOV sing 299 n n 
C22 C25 NOV sing 300 n n 
C24 H241 NOV sing 301 n n 
C24 H242 NOV sing 302 n n 
C24 H243 NOV sing 303 n n 
C25 H251 NOV sing 304 n n 
C25 H252 NOV sing 305 n n 
C25 H253 NOV sing 306 n n 
#
_atom_sites.entry_id                     4URO 
_atom_sites.fract_transf_matrix[1][1]    0.013463 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000404 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014579 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011671 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NOV A 1 2000 2000 NOV NOV . 
F 2 NOV B 1 2000 2000 NOV NOV . 
G 2 NOV C 1 2000 2000 NOV NOV . 
H 2 NOV D 1 2000 2000 NOV NOV . 
I 3 HOH A 1 2001 2001 HOH HOH . 
I 3 HOH A 2 2002 2002 HOH HOH . 
I 3 HOH A 3 2003 2003 HOH HOH . 
I 3 HOH A 4 2004 2004 HOH HOH . 
I 3 HOH A 5 2005 2005 HOH HOH . 
I 3 HOH A 6 2006 2006 HOH HOH . 
I 3 HOH A 7 2007 2007 HOH HOH . 
I 3 HOH A 8 2008 2008 HOH HOH . 
I 3 HOH A 9 2009 2009 HOH HOH . 
I 3 HOH A 10 2010 2010 HOH HOH . 
I 3 HOH A 11 2011 2011 HOH HOH . 
I 3 HOH A 12 2012 2012 HOH HOH . 
I 3 HOH A 13 2013 2013 HOH HOH . 
I 3 HOH A 14 2014 2014 HOH HOH . 
I 3 HOH A 15 2015 2015 HOH HOH . 
I 3 HOH A 16 2016 2016 HOH HOH . 
I 3 HOH A 17 2017 2017 HOH HOH . 
I 3 HOH A 18 2018 2018 HOH HOH . 
I 3 HOH A 19 2019 2019 HOH HOH . 
I 3 HOH A 20 2020 2020 HOH HOH . 
I 3 HOH A 21 2021 2021 HOH HOH . 
J 3 HOH B 1 2001 2001 HOH HOH . 
J 3 HOH B 2 2002 2002 HOH HOH . 
J 3 HOH B 3 2003 2003 HOH HOH . 
J 3 HOH B 4 2004 2004 HOH HOH . 
J 3 HOH B 5 2005 2005 HOH HOH . 
J 3 HOH B 6 2006 2006 HOH HOH . 
J 3 HOH B 7 2007 2007 HOH HOH . 
J 3 HOH B 8 2008 2008 HOH HOH . 
J 3 HOH B 9 2009 2009 HOH HOH . 
J 3 HOH B 10 2010 2010 HOH HOH . 
J 3 HOH B 11 2011 2011 HOH HOH . 
J 3 HOH B 12 2012 2012 HOH HOH . 
J 3 HOH B 13 2013 2013 HOH HOH . 
J 3 HOH B 14 2014 2014 HOH HOH . 
J 3 HOH B 15 2015 2015 HOH HOH . 
J 3 HOH B 16 2016 2016 HOH HOH . 
J 3 HOH B 17 2017 2017 HOH HOH . 
J 3 HOH B 18 2018 2018 HOH HOH . 
J 3 HOH B 19 2019 2019 HOH HOH . 
J 3 HOH B 20 2020 2020 HOH HOH . 
J 3 HOH B 21 2021 2021 HOH HOH . 
J 3 HOH B 22 2022 2022 HOH HOH . 
J 3 HOH B 23 2023 2023 HOH HOH . 
J 3 HOH B 24 2024 2024 HOH HOH . 
J 3 HOH B 25 2025 2025 HOH HOH . 
J 3 HOH B 26 2026 2026 HOH HOH . 
K 3 HOH C 1 2001 2001 HOH HOH . 
K 3 HOH C 2 2002 2002 HOH HOH . 
K 3 HOH C 3 2003 2003 HOH HOH . 
K 3 HOH C 4 2004 2004 HOH HOH . 
K 3 HOH C 5 2005 2005 HOH HOH . 
K 3 HOH C 6 2006 2006 HOH HOH . 
K 3 HOH C 7 2007 2007 HOH HOH . 
K 3 HOH C 8 2008 2008 HOH HOH . 
K 3 HOH C 9 2009 2009 HOH HOH . 
K 3 HOH C 10 2010 2010 HOH HOH . 
L 3 HOH D 1 2001 2001 HOH HOH . 
L 3 HOH D 2 2002 2002 HOH HOH . 
L 3 HOH D 3 2003 2003 HOH HOH . 
L 3 HOH D 4 2004 2004 HOH HOH . 
L 3 HOH D 5 2005 2005 HOH HOH . 
L 3 HOH D 6 2006 2006 HOH HOH . 
L 3 HOH D 7 2007 2007 HOH HOH . 
L 3 HOH D 8 2008 2008 HOH HOH . 
L 3 HOH D 9 2009 2009 HOH HOH . 
L 3 HOH D 10 2010 2010 HOH HOH . 
L 3 HOH D 11 2011 2011 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NOV . . . H 2 5.724 18.654 -39.84 1 49.92 ? C1 NOV 2000 D 1 
HETATM 2 O O1 NOV . . . H 2 7.09 19.01 -39.708 1 49.2 ? O1 NOV 2000 D 1 
HETATM 3 N N1 NOV . . . H 2 7.308 19.025 -34.999 1 44.77 ? N1 NOV 2000 D 1 
HETATM 4 C C12 NOV . . . H 2 8.293 18.86 -35.877 1 47.82 ? C12 NOV 2000 D 1 
HETATM 5 O O4 NOV . . . H 2 9.453 19.158 -35.684 1 49.87 ? O4 NOV 2000 D 1 
HETATM 6 O O5 NOV . . . H 2 7.829 18.287 -37.023 1 49.52 ? O5 NOV 2000 D 1 
HETATM 7 C C27 NOV . . . H 2 7.959 17.915 -39.441 1 50.22 ? C27 NOV 2000 D 1 
HETATM 8 C C28 NOV . . . H 2 8.735 18.138 -38.14 1 50.59 ? C28 NOV 2000 D 1 
HETATM 9 C C29 NOV . . . H 2 9.725 17.001 -37.909 1 53 ? C29 NOV 2000 D 1 
HETATM 10 O O6 NOV . . . H 2 9.068 15.746 -37.743 1 51.67 ? O6 NOV 2000 D 1 
HETATM 11 C C30 NOV . . . H 2 10.717 16.927 -39.067 1 57.07 ? C30 NOV 2000 D 1 
HETATM 12 O O7 NOV . . . H 2 10.096 16.874 -40.354 1 55.08 ? O7 NOV 2000 D 1 
HETATM 13 C C31 NOV . . . H 2 8.945 17.693 -40.694 1 51.77 ? C31 NOV 2000 D 1 
HETATM 14 C C23 NOV . . . H 2 9.507 18.969 -41.303 1 50.27 ? C23 NOV 2000 D 1 
HETATM 15 C C26 NOV . . . H 2 8.295 16.833 -41.765 1 50.8 ? C26 NOV 2000 D 1 
HETATM 16 O O8 NOV . . . H 2 11.542 18.068 -38.991 1 60.66 ? O8 NOV 2000 D 1 
HETATM 17 C C3 NOV . . . H 2 12.739 18.066 -39.667 1 64.75 ? C3 NOV 2000 D 1 
HETATM 18 C C4 NOV . . . H 2 13.489 19.236 -39.509 1 67.04 ? C4 NOV 2000 D 1 
HETATM 19 C C2 NOV . . . H 2 12.967 20.381 -38.673 1 66.95 ? C2 NOV 2000 D 1 
HETATM 20 C C5 NOV . . . H 2 14.752 19.27 -40.103 1 68.79 ? C5 NOV 2000 D 1 
HETATM 21 C C9 NOV . . . H 2 15.273 18.185 -40.82 1 69.56 ? C9 NOV 2000 D 1 
HETATM 22 C C10 NOV . . . H 2 14.478 17.048 -40.975 1 66.91 ? C10 NOV 2000 D 1 
HETATM 23 C C11 NOV . . . H 2 13.218 16.985 -40.407 1 65.45 ? C11 NOV 2000 D 1 
HETATM 24 O O10 NOV . . . H 2 15.477 20.431 -39.912 1 69.86 ? O10 NOV 2000 D 1 
HETATM 25 C C6 NOV . . . H 2 16.754 20.609 -40.398 1 70.61 ? C6 NOV 2000 D 1 
HETATM 26 O O11 NOV . . . H 2 17.263 21.667 -40.12 1 69.46 ? O11 NOV 2000 D 1 
HETATM 27 C C7 NOV . . . H 2 17.358 19.437 -41.197 1 71.4 ? C7 NOV 2000 D 1 
HETATM 28 C C8 NOV . . . H 2 16.627 18.294 -41.352 1 71.61 ? C8 NOV 2000 D 1 
HETATM 29 O O9 NOV . . . H 2 17.112 17.202 -41.943 1 71.87 ? O9 NOV 2000 D 1 
HETATM 30 N N2 NOV . . . H 2 18.594 19.761 -41.819 1 70.08 ? N2 NOV 2000 D 1 
HETATM 31 C C13 NOV . . . H 2 19.028 21.01 -42.206 1 66.5 ? C13 NOV 2000 D 1 
HETATM 32 O O2 NOV . . . H 2 19.973 21.578 -41.659 1 68.02 ? O2 NOV 2000 D 1 
HETATM 33 C C14 NOV . . . H 2 18.216 21.682 -43.27 1 60.33 ? C14 NOV 2000 D 1 
HETATM 34 C C15 NOV . . . H 2 17.331 20.936 -44.045 1 56.94 ? C15 NOV 2000 D 1 
HETATM 35 C C16 NOV . . . H 2 16.386 21.548 -44.866 1 51.72 ? C16 NOV 2000 D 1 
HETATM 36 C C17 NOV . . . H 2 16.365 22.948 -44.925 1 50.21 ? C17 NOV 2000 D 1 
HETATM 37 O O3 NOV . . . H 2 15.44 23.601 -45.676 1 49.57 ? O3 NOV 2000 D 1 
HETATM 38 C C18 NOV . . . H 2 17.279 23.699 -44.193 1 52.88 ? C18 NOV 2000 D 1 
HETATM 39 C C19 NOV . . . H 2 18.198 23.07 -43.375 1 57.21 ? C19 NOV 2000 D 1 
HETATM 40 C C20 NOV . . . H 2 15.445 20.626 -45.615 1 50.87 ? C20 NOV 2000 D 1 
HETATM 41 C C21 NOV . . . H 2 14 20.91 -45.311 1 52.09 ? C21 NOV 2000 D 1 
HETATM 42 C C22 NOV . . . H 2 13.079 20.077 -44.848 1 52.44 ? C22 NOV 2000 D 1 
HETATM 43 C C24 NOV . . . H 2 13.322 18.63 -44.538 1 52.8 ? C24 NOV 2000 D 1 
HETATM 44 C C25 NOV . . . H 2 11.681 20.536 -44.594 1 52.38 ? C25 NOV 2000 D 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           44 
#