data_4USD
#
_model_server_result.job_id            fk87W4J8n7LhNaxlm0qJzw 
_model_server_result.datetime_utc      '2024-12-02 13:40:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4usd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":500}' 
#
_entry.id    4USD 
#
_exptl.entry_id    4USD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              483.581 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-{5-(6-methoxynaphthalen-2-yl)-1-methyl-2-[2-methyl-4-(methylsulfonyl)phenyl]-1H-imidazol-4-yl}pyridine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4USD 
_cell.length_a            46.72 
_cell.length_b            99.6 
_cell.length_c            151.77 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4USD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C 1 1 
B,D 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C28 H25 N3 O3 S' 
_chem_comp.formula_weight    483.581 
_chem_comp.id                R09 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-{5-(6-methoxynaphthalen-2-yl)-1-methyl-2-[2-methyl-4-(methylsulfonyl)phenyl]-1H-imidazol-4-yl}pyridine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAB CAW R09 sing 275 n n 
CAW CAQ R09 sing 276 n y 
CAW CBB R09 doub 277 n y 
CAQ CBA R09 doub 278 n y 
CBA SBI R09 sing 279 n n 
CBA CAL R09 sing 280 n y 
SBI OAE R09 doub 281 n n 
SBI OAF R09 doub 282 n n 
SBI CAD R09 sing 283 n n 
CAL CAN R09 doub 284 n y 
CAN CBB R09 sing 285 n y 
CBB CBD R09 sing 286 n n 
CBD NBH R09 sing 287 n y 
CBD NAU R09 doub 288 n y 
NBH CAC R09 sing 289 n n 
NBH CBE R09 sing 290 n y 
NAU CBC R09 sing 291 n y 
CBC CAY R09 sing 292 n n 
CBC CBE R09 doub 293 n y 
CAY CAI R09 doub 294 n y 
CAY CAJ R09 sing 295 n y 
CAI CAG R09 sing 296 n y 
CAG NAT R09 doub 297 n y 
NAT CAH R09 sing 298 n y 
CAH CAJ R09 doub 299 n y 
CBE CAZ R09 sing 300 n n 
CAZ CAS R09 sing 301 n y 
CAZ CAM R09 doub 302 n y 
CAS CBG R09 doub 303 n y 
CBG CAO R09 sing 304 n y 
CBG CBF R09 sing 305 n y 
CAO CAK R09 doub 306 n y 
CAK CAX R09 sing 307 n y 
CAX OAV R09 sing 308 n n 
CAX CAR R09 doub 309 n y 
OAV CAA R09 sing 310 n n 
CAR CBF R09 sing 311 n y 
CBF CAP R09 doub 312 n y 
CAP CAM R09 sing 313 n y 
CAB HAB1 R09 sing 314 n n 
CAB HAB2 R09 sing 315 n n 
CAB HAB3 R09 sing 316 n n 
CAQ HAQ R09 sing 317 n n 
CAL HAL R09 sing 318 n n 
CAD HAD1 R09 sing 319 n n 
CAD HAD2 R09 sing 320 n n 
CAD HAD3 R09 sing 321 n n 
CAN HAN R09 sing 322 n n 
CAC HAC1 R09 sing 323 n n 
CAC HAC2 R09 sing 324 n n 
CAC HAC3 R09 sing 325 n n 
CAI HAI R09 sing 326 n n 
CAJ HAJ R09 sing 327 n n 
CAG HAG R09 sing 328 n n 
CAH HAH R09 sing 329 n n 
CAS HAS R09 sing 330 n n 
CAM HAM R09 sing 331 n n 
CAO HAO R09 sing 332 n n 
CAK HAK R09 sing 333 n n 
CAR HAR R09 sing 334 n n 
CAA HAA1 R09 sing 335 n n 
CAA HAA2 R09 sing 336 n n 
CAA HAA3 R09 sing 337 n n 
CAP HAP R09 sing 338 n n 
#
_atom_sites.entry_id                     4USD 
_atom_sites.fract_transf_matrix[1][1]    0.021404 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01004 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006589 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 R09 A 1 500 500 R09 R09 . 
D 2 R09 B 1 500 500 R09 R09 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAB R09 . . . D 2 34.002 0.986 21.853 1 45.05 ? CAB R09 500 B 1 
HETATM 2 C CAW R09 . . . D 2 33.741 2.219 22.454 1 46.67 ? CAW R09 500 B 1 
HETATM 3 C CAQ R09 . . . D 2 34.751 2.883 23.116 1 51.06 ? CAQ R09 500 B 1 
HETATM 4 C CBA R09 . . . D 2 34.496 4.118 23.712 1 55.82 ? CBA R09 500 B 1 
HETATM 5 S SBI R09 . . . D 2 35.757 4.937 24.535 1 68.61 ? SBI R09 500 B 1 
HETATM 6 O OAE R09 . . . D 2 35.379 6.414 24.752 1 63.75 ? OAE R09 500 B 1 
HETATM 7 O OAF R09 . . . D 2 35.944 4.22 25.87 1 72.68 ? OAF R09 500 B 1 
HETATM 8 C CAD R09 . . . D 2 37.288 4.81 23.572 1 71.51 ? CAD R09 500 B 1 
HETATM 9 C CAL R09 . . . D 2 33.248 4.705 23.665 1 50.6 ? CAL R09 500 B 1 
HETATM 10 C CAN R09 . . . D 2 32.239 4.051 23.004 1 46.99 ? CAN R09 500 B 1 
HETATM 11 C CBB R09 . . . D 2 32.495 2.823 22.428 1 46.79 ? CBB R09 500 B 1 
HETATM 12 C CBD R09 . . . D 2 31.517 2.269 21.782 1 50.35 ? CBD R09 500 B 1 
HETATM 13 N NBH R09 . . . D 2 30.33 1.939 22.269 1 54.54 ? NBH R09 500 B 1 
HETATM 14 C CAC R09 . . . D 2 29.86 2.086 23.684 1 55.71 ? CAC R09 500 B 1 
HETATM 15 N NAU R09 . . . D 2 31.618 2.042 20.488 1 50.74 ? NAU R09 500 B 1 
HETATM 16 C CBC R09 . . . D 2 30.461 1.51 20.121 1 53.76 ? CBC R09 500 B 1 
HETATM 17 C CAY R09 . . . D 2 30.255 1.127 18.841 1 54.43 ? CAY R09 500 B 1 
HETATM 18 C CAI R09 . . . D 2 29.006 0.79 18.32 1 56.41 ? CAI R09 500 B 1 
HETATM 19 C CAG R09 . . . D 2 28.847 0.406 16.984 1 56.79 ? CAG R09 500 B 1 
HETATM 20 N NAT R09 . . . D 2 29.941 0.343 16.135 1 53.69 ? NAT R09 500 B 1 
HETATM 21 C CAH R09 . . . D 2 31.201 0.671 16.654 1 53.38 ? CAH R09 500 B 1 
HETATM 22 C CAJ R09 . . . D 2 31.355 1.06 17.976 1 53.7 ? CAJ R09 500 B 1 
HETATM 23 C CBE R09 . . . D 2 29.676 1.464 21.22 1 54.24 ? CBE R09 500 B 1 
HETATM 24 C CAZ R09 . . . D 2 28.456 0.987 21.372 1 53.85 ? CAZ R09 500 B 1 
HETATM 25 C CAS R09 . . . D 2 28.285 -0.387 21.245 1 57.18 ? CAS R09 500 B 1 
HETATM 26 C CBG R09 . . . D 2 27.028 -0.953 21.409 1 58.2 ? CBG R09 500 B 1 
HETATM 27 C CAO R09 . . . D 2 26.846 -2.347 21.254 1 59.9 ? CAO R09 500 B 1 
HETATM 28 C CAK R09 . . . D 2 25.576 -2.9 21.436 1 58.97 ? CAK R09 500 B 1 
HETATM 29 C CAX R09 . . . D 2 24.504 -2.049 21.782 1 55.7 ? CAX R09 500 B 1 
HETATM 30 O OAV R09 . . . D 2 23.261 -2.595 21.938 1 52.62 ? OAV R09 500 B 1 
HETATM 31 C CAA R09 . . . D 2 22.35 -2.046 22.89 1 52.11 ? CAA R09 500 B 1 
HETATM 32 C CAR R09 . . . D 2 24.7 -0.666 21.913 1 52.75 ? CAR R09 500 B 1 
HETATM 33 C CBF R09 . . . D 2 25.958 -0.112 21.734 1 51.9 ? CBF R09 500 B 1 
HETATM 34 C CAP R09 . . . D 2 26.132 1.257 21.869 1 48.37 ? CAP R09 500 B 1 
HETATM 35 C CAM R09 . . . D 2 27.392 1.812 21.706 1 50.67 ? CAM R09 500 B 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          23 
_model_server_stats.element_count           35 
#