data_4USE # _model_server_result.job_id O34sGsatPzTs9UOtdMNYVw _model_server_result.datetime_utc '2024-12-03 10:42:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4use # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":500}' # _entry.id 4USE # _exptl.entry_id 4USE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 483.581 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{5-(6-methoxynaphthalen-2-yl)-1-methyl-2-[2-methyl-4-(methylsulfonyl)phenyl]-1H-imidazol-4-yl}pyridine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.16 _cell.angle_gamma 90 _cell.entry_id 4USE _cell.length_a 62.04 _cell.length_b 50.25 _cell.length_c 133.71 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4USE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PQS monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 191 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 206 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 191 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 206 _struct_conn.ptnr2_symmetry 1_565 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.541 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C28 H25 N3 O3 S' _chem_comp.formula_weight 483.581 _chem_comp.id R09 _chem_comp.mon_nstd_flag . _chem_comp.name 4-{5-(6-methoxynaphthalen-2-yl)-1-methyl-2-[2-methyl-4-(methylsulfonyl)phenyl]-1H-imidazol-4-yl}pyridine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAB CAW R09 sing 277 n n CAW CAQ R09 sing 278 n y CAW CBB R09 doub 279 n y CAQ CBA R09 doub 280 n y CBA SBI R09 sing 281 n n CBA CAL R09 sing 282 n y SBI OAE R09 doub 283 n n SBI OAF R09 doub 284 n n SBI CAD R09 sing 285 n n CAL CAN R09 doub 286 n y CAN CBB R09 sing 287 n y CBB CBD R09 sing 288 n n CBD NBH R09 sing 289 n y CBD NAU R09 doub 290 n y NBH CAC R09 sing 291 n n NBH CBE R09 sing 292 n y NAU CBC R09 sing 293 n y CBC CAY R09 sing 294 n n CBC CBE R09 doub 295 n y CAY CAI R09 doub 296 n y CAY CAJ R09 sing 297 n y CAI CAG R09 sing 298 n y CAG NAT R09 doub 299 n y NAT CAH R09 sing 300 n y CAH CAJ R09 doub 301 n y CBE CAZ R09 sing 302 n n CAZ CAS R09 sing 303 n y CAZ CAM R09 doub 304 n y CAS CBG R09 doub 305 n y CBG CAO R09 sing 306 n y CBG CBF R09 sing 307 n y CAO CAK R09 doub 308 n y CAK CAX R09 sing 309 n y CAX OAV R09 sing 310 n n CAX CAR R09 doub 311 n y OAV CAA R09 sing 312 n n CAR CBF R09 sing 313 n y CBF CAP R09 doub 314 n y CAP CAM R09 sing 315 n y CAB HAB1 R09 sing 316 n n CAB HAB2 R09 sing 317 n n CAB HAB3 R09 sing 318 n n CAQ HAQ R09 sing 319 n n CAL HAL R09 sing 320 n n CAD HAD1 R09 sing 321 n n CAD HAD2 R09 sing 322 n n CAD HAD3 R09 sing 323 n n CAN HAN R09 sing 324 n n CAC HAC1 R09 sing 325 n n CAC HAC2 R09 sing 326 n n CAC HAC3 R09 sing 327 n n CAI HAI R09 sing 328 n n CAJ HAJ R09 sing 329 n n CAG HAG R09 sing 330 n n CAH HAH R09 sing 331 n n CAS HAS R09 sing 332 n n CAM HAM R09 sing 333 n n CAO HAO R09 sing 334 n n CAK HAK R09 sing 335 n n CAR HAR R09 sing 336 n n CAA HAA1 R09 sing 337 n n CAA HAA2 R09 sing 338 n n CAA HAA3 R09 sing 339 n n CAP HAP R09 sing 340 n n # _atom_sites.entry_id 4USE _atom_sites.fract_transf_matrix[1][1] 0.016119 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00318 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0199 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007623 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 R09 A 1 500 500 R09 R09 . D 2 R09 B 1 500 500 R09 R09 . E 3 HOH A 1 2001 2001 HOH HOH . E 3 HOH A 2 2002 2002 HOH HOH . E 3 HOH A 3 2003 2003 HOH HOH . E 3 HOH A 4 2004 2004 HOH HOH . E 3 HOH A 5 2005 2005 HOH HOH . E 3 HOH A 6 2006 2006 HOH HOH . E 3 HOH A 7 2007 2007 HOH HOH . E 3 HOH A 8 2008 2008 HOH HOH . E 3 HOH A 9 2009 2009 HOH HOH . E 3 HOH A 10 2010 2010 HOH HOH . E 3 HOH A 11 2011 2011 HOH HOH . F 3 HOH B 1 2001 2001 HOH HOH . F 3 HOH B 2 2002 2002 HOH HOH . F 3 HOH B 3 2003 2003 HOH HOH . F 3 HOH B 4 2004 2004 HOH HOH . F 3 HOH B 5 2005 2005 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAB R09 . . . D 2 -1.672 -14.982 -16.396 1 108.73 ? CAB R09 500 B 1 HETATM 2 C CAW R09 . . . D 2 -2.232 -13.756 -16.767 1 117.52 ? CAW R09 500 B 1 HETATM 3 C CAQ R09 . . . D 2 -1.387 -12.68 -17.033 1 128.57 ? CAQ R09 500 B 1 HETATM 4 C CBA R09 . . . D 2 -1.921 -11.449 -17.405 1 144.6 ? CBA R09 500 B 1 HETATM 5 S SBI R09 . . . D 2 -0.838 -10.086 -17.743 1 176.38 ? SBI R09 500 B 1 HETATM 6 O OAE R09 . . . D 2 0.621 -10.515 -17.545 1 173.57 ? OAE R09 500 B 1 HETATM 7 O OAF R09 . . . D 2 -1.049 -9.613 -19.187 1 179.43 ? OAF R09 500 B 1 HETATM 8 C CAD R09 . . . D 2 -1.206 -8.747 -16.621 1 171.55 ? CAD R09 500 B 1 HETATM 9 C CAL R09 . . . D 2 -3.304 -11.289 -17.51 1 132.88 ? CAL R09 500 B 1 HETATM 10 C CAN R09 . . . D 2 -4.156 -12.358 -17.247 1 122.05 ? CAN R09 500 B 1 HETATM 11 C CBB R09 . . . D 2 -3.619 -13.598 -16.904 1 117.03 ? CBB R09 500 B 1 HETATM 12 C CBD R09 . . . D 2 -4.429 -14.606 -16.596 1 106.25 ? CBD R09 500 B 1 HETATM 13 N NBH R09 . . . D 2 -4.877 -15.647 -17.302 1 98.08 ? NBH R09 500 B 1 HETATM 14 C CAC R09 . . . D 2 -4.589 -15.95 -18.729 1 102.61 ? CAC R09 500 B 1 HETATM 15 N NAU R09 . . . D 2 -4.87 -14.661 -15.359 1 100.78 ? NAU R09 500 B 1 HETATM 16 C CBC R09 . . . D 2 -5.623 -15.732 -15.25 1 93 ? CBC R09 500 B 1 HETATM 17 C CAY R09 . . . D 2 -6.212 -15.979 -14.066 1 92.07 ? CAY R09 500 B 1 HETATM 18 C CAI R09 . . . D 2 -6.298 -14.91 -13.162 1 88.09 ? CAI R09 500 B 1 HETATM 19 C CAG R09 . . . D 2 -6.89 -15.064 -11.915 1 86.46 ? CAG R09 500 B 1 HETATM 20 N NAT R09 . . . D 2 -7.403 -16.304 -11.541 1 89.02 ? NAT R09 500 B 1 HETATM 21 C CAH R09 . . . D 2 -7.317 -17.383 -12.428 1 89.73 ? CAH R09 500 B 1 HETATM 22 C CAJ R09 . . . D 2 -6.727 -17.22 -13.68 1 93.16 ? CAJ R09 500 B 1 HETATM 23 C CBE R09 . . . D 2 -5.654 -16.336 -16.455 1 87.77 ? CBE R09 500 B 1 HETATM 24 C CAZ R09 . . . D 2 -6.267 -17.478 -16.756 1 79.5 ? CAZ R09 500 B 1 HETATM 25 C CAS R09 . . . D 2 -7.649 -17.61 -16.827 1 76.09 ? CAS R09 500 B 1 HETATM 26 C CBG R09 . . . D 2 -8.211 -18.851 -17.121 1 75.91 ? CBG R09 500 B 1 HETATM 27 C CAO R09 . . . D 2 -9.595 -18.987 -17.199 1 79.81 ? CAO R09 500 B 1 HETATM 28 C CAK R09 . . . D 2 -10.162 -20.226 -17.494 1 83.69 ? CAK R09 500 B 1 HETATM 29 C CAX R09 . . . D 2 -9.342 -21.336 -17.718 1 86.4 ? CAX R09 500 B 1 HETATM 30 O OAV R09 . . . D 2 -9.9 -22.552 -18 1 93.57 ? OAV R09 500 B 1 HETATM 31 C CAA R09 . . . D 2 -9.99 -22.813 -19.407 1 95.75 ? CAA R09 500 B 1 HETATM 32 C CAR R09 . . . D 2 -7.955 -21.204 -17.634 1 80.98 ? CAR R09 500 B 1 HETATM 33 C CBF R09 . . . D 2 -7.397 -19.963 -17.34 1 77.43 ? CBF R09 500 B 1 HETATM 34 C CAP R09 . . . D 2 -6.021 -19.834 -17.264 1 77.05 ? CAP R09 500 B 1 HETATM 35 C CAM R09 . . . D 2 -5.462 -18.596 -16.966 1 78.07 ? CAM R09 500 B 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #