data_4UTN # _model_server_result.job_id S0I0WXlSc-H3SK0DZUYNOw _model_server_result.datetime_utc '2024-11-05 21:03:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4utn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1299}' # _entry.id 4UTN # _exptl.entry_id 4UTN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4UTN _cell.length_a 87.44 _cell.length_b 87.44 _cell.length_c 314.92 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UTN _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,I 1 1 B,E,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 251 A CYS 274 1_555 B SG CYS 251 B CYS 274 12_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? covale ? covale1 C C BEZ 1 D BEZ 0 1_555 C N GLY 2 D GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.364 ? covale ? covale2 C C LEU 4 D LEU 3 1_555 C N SLL 5 D SLL 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 C C SLL 5 D SLL 4 1_555 C N GLU 6 D GLU 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? metalc ? metalc1 A SG CYS 139 A CYS 162 1_555 D ZN ZN . A ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc2 A SG CYS 142 A CYS 165 1_555 D ZN ZN . A ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc3 A SG CYS 180 A CYS 203 1_555 D ZN ZN . A ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc4 A SG CYS 185 A CYS 208 1_555 D ZN ZN . A ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc5 B SG CYS 139 B CYS 162 1_555 F ZN ZN . B ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc6 B SG CYS 142 B CYS 165 1_555 F ZN ZN . B ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc7 B SG CYS 180 B CYS 203 1_555 F ZN ZN . B ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc8 B SG CYS 185 B CYS 208 1_555 F ZN ZN . B ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 116 n n N1 C6 EPE sing 117 n n N1 C9 EPE sing 118 n n C2 C3 EPE sing 119 n n C2 H21 EPE sing 120 n n C2 H22 EPE sing 121 n n C3 N4 EPE sing 122 n n C3 H31 EPE sing 123 n n C3 H32 EPE sing 124 n n N4 C5 EPE sing 125 n n N4 C7 EPE sing 126 n n C5 C6 EPE sing 127 n n C5 H51 EPE sing 128 n n C5 H52 EPE sing 129 n n C6 H61 EPE sing 130 n n C6 H62 EPE sing 131 n n C7 C8 EPE sing 132 n n C7 H71 EPE sing 133 n n C7 H72 EPE sing 134 n n C8 O8 EPE sing 135 n n C8 H81 EPE sing 136 n n C8 H82 EPE sing 137 n n O8 HO8 EPE sing 138 n n C9 C10 EPE sing 139 n n C9 H91 EPE sing 140 n n C9 H92 EPE sing 141 n n C10 S EPE sing 142 n n C10 H101 EPE sing 143 n n C10 H102 EPE sing 144 n n S O1S EPE doub 145 n n S O2S EPE doub 146 n n S O3S EPE sing 147 n n O3S HOS3 EPE sing 148 n n # _atom_sites.entry_id 4UTN _atom_sites.fract_transf_matrix[1][1] 0.011436 _atom_sites.fract_transf_matrix[1][2] 0.006603 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013206 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003175 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 ZN A 1 1300 1300 ZN ZN . E 4 EPE B 1 1299 1299 EPE EPE . F 3 ZN B 1 1300 1300 ZN ZN . G 5 DMS B 1 1301 1301 DMS DMS . H 6 EDO B 1 1302 1302 EDO EDO . I 7 HOH A 1 2001 2001 HOH HOH . I 7 HOH A 2 2002 2002 HOH HOH . I 7 HOH A 3 2003 2003 HOH HOH . I 7 HOH A 4 2004 2004 HOH HOH . I 7 HOH A 5 2005 2005 HOH HOH . I 7 HOH A 6 2006 2006 HOH HOH . I 7 HOH A 7 2007 2007 HOH HOH . I 7 HOH A 8 2008 2008 HOH HOH . I 7 HOH A 9 2009 2009 HOH HOH . I 7 HOH A 10 2010 2010 HOH HOH . I 7 HOH A 11 2011 2011 HOH HOH . I 7 HOH A 12 2012 2012 HOH HOH . J 7 HOH B 1 2001 2001 HOH HOH . J 7 HOH B 2 2002 2002 HOH HOH . J 7 HOH B 3 2003 2003 HOH HOH . J 7 HOH B 4 2004 2004 HOH HOH . J 7 HOH B 5 2005 2005 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . E 4 -9.64 26.341 -32.638 1 76.35 ? N1 EPE 1299 B 1 HETATM 2 C C2 EPE . . . E 4 -9.693 25.864 -34.031 1 70.28 ? C2 EPE 1299 B 1 HETATM 3 C C3 EPE . . . E 4 -10.18 27.042 -34.86 1 71.34 ? C3 EPE 1299 B 1 HETATM 4 N N4 EPE . . . E 4 -9.21 28.148 -34.749 1 71.9 ? N4 EPE 1299 B 1 HETATM 5 C C5 EPE . . . E 4 -9.045 28.505 -33.34 1 76.04 ? C5 EPE 1299 B 1 HETATM 6 C C6 EPE . . . E 4 -8.552 27.313 -32.53 1 77.97 ? C6 EPE 1299 B 1 HETATM 7 C C7 EPE . . . E 4 -9.522 29.372 -35.52 1 73.41 ? C7 EPE 1299 B 1 HETATM 8 C C8 EPE . . . E 4 -10.939 29.904 -35.327 1 73.43 ? C8 EPE 1299 B 1 HETATM 9 O O8 EPE . . . E 4 -11.506 30.197 -36.611 1 71.74 ? O8 EPE 1299 B 1 HETATM 10 C C9 EPE . . . E 4 -9.541 25.3 -31.604 1 78.81 ? C9 EPE 1299 B 1 HETATM 11 C C10 EPE . . . E 4 -8.634 24.162 -32.053 1 79.54 ? C10 EPE 1299 B 1 HETATM 12 S S EPE . . . E 4 -8.609 23 -30.87 1 82.45 ? S EPE 1299 B 1 HETATM 13 O O1S EPE . . . E 4 -9.888 22.26 -30.749 1 74.04 ? O1S EPE 1299 B 1 HETATM 14 O O2S EPE . . . E 4 -8.459 23.665 -29.55 1 88.98 ? O2S EPE 1299 B 1 HETATM 15 O O3S EPE . . . E 4 -7.497 22.081 -31.249 1 69.16 ? O3S EPE 1299 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 217 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #