data_4UTR # _model_server_result.job_id Kn5E_V49IH6BhPIu_ZdB_A _model_server_result.datetime_utc '2024-11-24 03:54:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4utr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1299}' # _entry.id 4UTR # _exptl.entry_id 4UTR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4UTR _cell.length_a 87.22 _cell.length_b 87.22 _cell.length_c 314.04 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UTR _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K,L 1 1 B,G,H,I,J,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 251 A CYS 274 1_555 B SG CYS 251 B CYS 274 12_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 C C BEZ 1 C BEZ 0 1_555 C N GLY 2 C GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? covale ? covale2 C NZ LYS 5 C LYS 4 1_555 K C5 GUA . C GUA 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? metalc ? metalc1 A SG CYS 139 A CYS 162 1_555 D ZN ZN . A ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc2 A SG CYS 142 A CYS 165 1_555 D ZN ZN . A ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc3 A SG CYS 180 A CYS 203 1_555 D ZN ZN . A ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc4 A SG CYS 185 A CYS 208 1_555 D ZN ZN . A ZN 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc5 B SG CYS 139 B CYS 162 1_555 G ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc6 B SG CYS 142 B CYS 165 1_555 G ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc7 B SG CYS 180 B CYS 203 1_555 G ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc8 B SG CYS 185 B CYS 208 1_555 G ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc9 B OD1 ASP 201 B ASP 224 1_555 J NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.854 ? metalc ? metalc10 B OD1 ASP 201 B ASP 224 12_564 J NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? metalc ? metalc11 B OD2 ASP 203 B ASP 226 12_564 J NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? metalc ? metalc12 B OD2 ASP 203 B ASP 226 1_555 J NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4UTR _atom_sites.fract_transf_matrix[1][1] 0.011465 _atom_sites.fract_transf_matrix[1][2] 0.006619 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013239 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003184 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 ZN A 1 1300 1300 ZN ZN . E 4 EDO A 1 1301 1301 EDO EDO . F 4 EDO A 1 1302 1302 EDO EDO . G 3 ZN B 1 1299 1299 ZN ZN . H 4 EDO B 1 1300 1300 EDO EDO . I 5 DMS B 1 1301 1301 DMS DMS . J 6 NA B 1 1302 1302 NA NA . K 7 GUA C 1 1299 1299 GUA GUA . L 8 HOH A 1 2001 2001 HOH HOH . L 8 HOH A 2 2002 2002 HOH HOH . L 8 HOH A 3 2003 2003 HOH HOH . L 8 HOH A 4 2004 2004 HOH HOH . L 8 HOH A 5 2005 2005 HOH HOH . L 8 HOH A 6 2006 2006 HOH HOH . L 8 HOH A 7 2007 2007 HOH HOH . L 8 HOH A 8 2008 2008 HOH HOH . L 8 HOH A 9 2009 2009 HOH HOH . L 8 HOH A 10 2010 2010 HOH HOH . L 8 HOH A 11 2011 2011 HOH HOH . L 8 HOH A 12 2012 2012 HOH HOH . L 8 HOH A 13 2013 2013 HOH HOH . L 8 HOH A 14 2014 2014 HOH HOH . L 8 HOH A 15 2015 2015 HOH HOH . L 8 HOH A 16 2016 2016 HOH HOH . L 8 HOH A 17 2017 2017 HOH HOH . L 8 HOH A 18 2018 2018 HOH HOH . L 8 HOH A 19 2019 2019 HOH HOH . L 8 HOH A 20 2020 2020 HOH HOH . L 8 HOH A 21 2021 2021 HOH HOH . L 8 HOH A 22 2022 2022 HOH HOH . L 8 HOH A 23 2023 2023 HOH HOH . L 8 HOH A 24 2024 2024 HOH HOH . L 8 HOH A 25 2025 2025 HOH HOH . L 8 HOH A 26 2026 2026 HOH HOH . L 8 HOH A 27 2027 2027 HOH HOH . L 8 HOH A 28 2028 2028 HOH HOH . L 8 HOH A 29 2029 2029 HOH HOH . L 8 HOH A 30 2030 2030 HOH HOH . L 8 HOH A 31 2031 2031 HOH HOH . L 8 HOH A 32 2032 2032 HOH HOH . L 8 HOH A 33 2033 2033 HOH HOH . L 8 HOH A 34 2034 2034 HOH HOH . L 8 HOH A 35 2035 2035 HOH HOH . L 8 HOH A 36 2036 2036 HOH HOH . L 8 HOH A 37 2037 2037 HOH HOH . L 8 HOH A 38 2038 2038 HOH HOH . L 8 HOH A 39 2039 2039 HOH HOH . M 8 HOH B 1 2001 2001 HOH HOH . M 8 HOH B 2 2002 2002 HOH HOH . M 8 HOH B 3 2003 2003 HOH HOH . M 8 HOH B 4 2004 2004 HOH HOH . M 8 HOH B 5 2005 2005 HOH HOH . M 8 HOH B 6 2006 2006 HOH HOH . M 8 HOH B 7 2007 2007 HOH HOH . M 8 HOH B 8 2008 2008 HOH HOH . M 8 HOH B 9 2009 2009 HOH HOH . M 8 HOH B 10 2010 2010 HOH HOH . M 8 HOH B 11 2011 2011 HOH HOH . M 8 HOH B 12 2012 2012 HOH HOH . M 8 HOH B 13 2013 2013 HOH HOH . M 8 HOH B 14 2014 2014 HOH HOH . M 8 HOH B 15 2015 2015 HOH HOH . M 8 HOH B 16 2016 2016 HOH HOH . M 8 HOH B 17 2017 2017 HOH HOH . M 8 HOH B 18 2018 2018 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x -24.615 _atom_site.Cartn_y 34.066 _atom_site.Cartn_z -16.439 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 86.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1299 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #