data_4UTV
#
_model_server_result.job_id            hqirdTVUG8aqE5uxPYElIg 
_model_server_result.datetime_utc      '2024-11-24 02:02:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4utv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1301}' 
#
_entry.id    4UTV 
#
_exptl.entry_id    4UTV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4UTV 
_cell.length_a            88.91 
_cell.length_b            88.91 
_cell.length_c            305.33 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4UTV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,I,J,K,M 1 1 
B,E,F,G,H,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C BEZ 1 C BEZ 0 1_555 C N GLY 2 C GLY 1 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.377 ? 
covale ? covale2 C C BEZ 1 C BEZ 0 1_555 C N GLY 2 C GLY 1 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.374 ? 
covale ? covale3 C NZ LYS 5 C LYS 4 1_555 I CAJ FSL . C FSL 1004 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.355 ? 
covale ? covale4 C NZ LYS 5 C LYS 4 1_555 J CAJ F9V . C F9V 1005 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.344 ? 
metalc ? metalc1 A SG CYS 139 A CYS 162 1_555 D ZN ZN . A ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? 
metalc ? metalc2 A SG CYS 142 A CYS 165 1_555 D ZN ZN . A ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc3 A SG CYS 180 A CYS 203 1_555 D ZN ZN . A ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc4 A SG CYS 185 A CYS 208 1_555 D ZN ZN . A ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc5 B SG CYS 139 B CYS 162 1_555 E ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc6 B SG CYS 142 B CYS 165 1_555 E ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc7 B SG CYS 180 B CYS 203 1_555 E ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc8 B SG CYS 185 B CYS 208 1_555 E ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc9 B OD2 ASP 201 B ASP 224 12_564 H NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? 
metalc ? metalc10 B OD2 ASP 201 B ASP 224 1_555 H NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? 
metalc ? metalc11 B OD2 ASP 203 B ASP 226 1_555 H NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.141 ? 
metalc ? metalc12 B OD2 ASP 203 B ASP 226 12_564 H NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.145 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 98 n n 
S C1 DMS sing 99 n n 
S C2 DMS sing 100 n n 
C1 H11 DMS sing 101 n n 
C1 H12 DMS sing 102 n n 
C1 H13 DMS sing 103 n n 
C2 H21 DMS sing 104 n n 
C2 H22 DMS sing 105 n n 
C2 H23 DMS sing 106 n n 
#
_atom_sites.entry_id                     4UTV 
_atom_sites.fract_transf_matrix[1][1]    0.011247 
_atom_sites.fract_transf_matrix[1][2]    0.006494 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012987 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003275 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 ZN A 1 1299 1299 ZN ZN . 
E 3 ZN B 1 1299 1299 ZN ZN . 
F 4 EPE B 1 1300 1300 EPE EPE . 
G 5 DMS B 1 1301 1301 DMS DMS . 
H 6 NA B 1 1302 1302 NA NA . 
I 7 FSL C 1 1004 1004 FSL FSL . 
J 8 F9V C 1 1005 1005 F9V F9V . 
K 9 HOH A 1 2001 2001 HOH HOH . 
K 9 HOH A 2 2002 2002 HOH HOH . 
K 9 HOH A 3 2003 2003 HOH HOH . 
K 9 HOH A 4 2004 2004 HOH HOH . 
K 9 HOH A 5 2005 2005 HOH HOH . 
K 9 HOH A 6 2006 2006 HOH HOH . 
K 9 HOH A 7 2007 2007 HOH HOH . 
K 9 HOH A 8 2008 2008 HOH HOH . 
K 9 HOH A 9 2009 2009 HOH HOH . 
K 9 HOH A 10 2010 2010 HOH HOH . 
K 9 HOH A 11 2011 2011 HOH HOH . 
K 9 HOH A 12 2012 2012 HOH HOH . 
K 9 HOH A 13 2013 2013 HOH HOH . 
K 9 HOH A 14 2014 2014 HOH HOH . 
K 9 HOH A 15 2015 2015 HOH HOH . 
K 9 HOH A 16 2016 2016 HOH HOH . 
K 9 HOH A 17 2017 2017 HOH HOH . 
K 9 HOH A 18 2018 2018 HOH HOH . 
K 9 HOH A 19 2019 2019 HOH HOH . 
K 9 HOH A 20 2020 2020 HOH HOH . 
K 9 HOH A 21 2021 2021 HOH HOH . 
K 9 HOH A 22 2022 2022 HOH HOH . 
K 9 HOH A 23 2023 2023 HOH HOH . 
K 9 HOH A 24 2024 2024 HOH HOH . 
K 9 HOH A 25 2025 2025 HOH HOH . 
K 9 HOH A 26 2026 2026 HOH HOH . 
K 9 HOH A 27 2027 2027 HOH HOH . 
K 9 HOH A 28 2028 2028 HOH HOH . 
K 9 HOH A 29 2029 2029 HOH HOH . 
K 9 HOH A 30 2030 2030 HOH HOH . 
K 9 HOH A 31 2031 2031 HOH HOH . 
K 9 HOH A 32 2032 2032 HOH HOH . 
K 9 HOH A 33 2033 2033 HOH HOH . 
K 9 HOH A 34 2034 2034 HOH HOH . 
K 9 HOH A 35 2035 2035 HOH HOH . 
K 9 HOH A 36 2036 2036 HOH HOH . 
K 9 HOH A 37 2037 2037 HOH HOH . 
K 9 HOH A 38 2038 2038 HOH HOH . 
K 9 HOH A 39 2039 2039 HOH HOH . 
K 9 HOH A 40 2040 2040 HOH HOH . 
K 9 HOH A 41 2041 2041 HOH HOH . 
K 9 HOH A 42 2042 2042 HOH HOH . 
K 9 HOH A 43 2043 2043 HOH HOH . 
K 9 HOH A 44 2044 2044 HOH HOH . 
K 9 HOH A 45 2045 2045 HOH HOH . 
K 9 HOH A 46 2046 2046 HOH HOH . 
K 9 HOH A 47 2047 2047 HOH HOH . 
K 9 HOH A 48 2048 2048 HOH HOH . 
K 9 HOH A 49 2049 2049 HOH HOH . 
K 9 HOH A 50 2050 2050 HOH HOH . 
K 9 HOH A 51 2051 2051 HOH HOH . 
K 9 HOH A 52 2052 2052 HOH HOH . 
K 9 HOH A 53 2053 2053 HOH HOH . 
K 9 HOH A 54 2054 2054 HOH HOH . 
K 9 HOH A 55 2055 2055 HOH HOH . 
K 9 HOH A 56 2056 2056 HOH HOH . 
K 9 HOH A 57 2057 2057 HOH HOH . 
K 9 HOH A 58 2058 2058 HOH HOH . 
K 9 HOH A 59 2059 2059 HOH HOH . 
K 9 HOH A 60 2060 2060 HOH HOH . 
K 9 HOH A 61 2061 2061 HOH HOH . 
K 9 HOH A 62 2062 2062 HOH HOH . 
K 9 HOH A 63 2063 2063 HOH HOH . 
K 9 HOH A 64 2064 2064 HOH HOH . 
K 9 HOH A 65 2065 2065 HOH HOH . 
K 9 HOH A 66 2066 2066 HOH HOH . 
K 9 HOH A 67 2067 2067 HOH HOH . 
K 9 HOH A 68 2068 2068 HOH HOH . 
K 9 HOH A 69 2069 2069 HOH HOH . 
K 9 HOH A 70 2070 2070 HOH HOH . 
K 9 HOH A 71 2071 2071 HOH HOH . 
K 9 HOH A 72 2072 2072 HOH HOH . 
K 9 HOH A 73 2073 2073 HOH HOH . 
K 9 HOH A 74 2074 2074 HOH HOH . 
K 9 HOH A 75 2075 2075 HOH HOH . 
K 9 HOH A 76 2076 2076 HOH HOH . 
K 9 HOH A 77 2077 2077 HOH HOH . 
K 9 HOH A 78 2078 2078 HOH HOH . 
K 9 HOH A 79 2079 2079 HOH HOH . 
K 9 HOH A 80 2080 2080 HOH HOH . 
K 9 HOH A 81 2081 2081 HOH HOH . 
K 9 HOH A 82 2082 2082 HOH HOH . 
K 9 HOH A 83 2083 2083 HOH HOH . 
K 9 HOH A 84 2084 2084 HOH HOH . 
K 9 HOH A 85 2085 2085 HOH HOH . 
K 9 HOH A 86 2086 2086 HOH HOH . 
K 9 HOH A 87 2087 2087 HOH HOH . 
K 9 HOH A 88 2088 2088 HOH HOH . 
K 9 HOH A 89 2089 2089 HOH HOH . 
L 9 HOH B 1 2001 2001 HOH HOH . 
L 9 HOH B 2 2002 2002 HOH HOH . 
L 9 HOH B 3 2003 2003 HOH HOH . 
L 9 HOH B 4 2004 2004 HOH HOH . 
L 9 HOH B 5 2005 2005 HOH HOH . 
L 9 HOH B 6 2006 2006 HOH HOH . 
L 9 HOH B 7 2007 2007 HOH HOH . 
L 9 HOH B 8 2008 2008 HOH HOH . 
L 9 HOH B 9 2009 2009 HOH HOH . 
L 9 HOH B 10 2010 2010 HOH HOH . 
L 9 HOH B 11 2011 2011 HOH HOH . 
L 9 HOH B 12 2012 2012 HOH HOH . 
L 9 HOH B 13 2013 2013 HOH HOH . 
L 9 HOH B 14 2014 2014 HOH HOH . 
L 9 HOH B 15 2015 2015 HOH HOH . 
L 9 HOH B 16 2016 2016 HOH HOH . 
L 9 HOH B 17 2017 2017 HOH HOH . 
L 9 HOH B 18 2018 2018 HOH HOH . 
L 9 HOH B 19 2019 2019 HOH HOH . 
L 9 HOH B 20 2020 2020 HOH HOH . 
L 9 HOH B 21 2021 2021 HOH HOH . 
L 9 HOH B 22 2022 2022 HOH HOH . 
L 9 HOH B 23 2023 2023 HOH HOH . 
L 9 HOH B 24 2024 2024 HOH HOH . 
L 9 HOH B 25 2025 2025 HOH HOH . 
L 9 HOH B 26 2026 2026 HOH HOH . 
L 9 HOH B 27 2027 2027 HOH HOH . 
L 9 HOH B 28 2028 2028 HOH HOH . 
L 9 HOH B 29 2029 2029 HOH HOH . 
L 9 HOH B 30 2030 2030 HOH HOH . 
L 9 HOH B 31 2031 2031 HOH HOH . 
L 9 HOH B 32 2032 2032 HOH HOH . 
L 9 HOH B 33 2033 2033 HOH HOH . 
L 9 HOH B 34 2034 2034 HOH HOH . 
L 9 HOH B 35 2035 2035 HOH HOH . 
L 9 HOH B 36 2036 2036 HOH HOH . 
L 9 HOH B 37 2037 2037 HOH HOH . 
L 9 HOH B 38 2038 2038 HOH HOH . 
L 9 HOH B 39 2039 2039 HOH HOH . 
L 9 HOH B 40 2040 2040 HOH HOH . 
L 9 HOH B 41 2041 2041 HOH HOH . 
L 9 HOH B 42 2042 2042 HOH HOH . 
L 9 HOH B 43 2043 2043 HOH HOH . 
L 9 HOH B 44 2044 2044 HOH HOH . 
M 9 HOH C 1 2001 2001 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . G 5 9.884 34.5 -12.54 1 55.05 ? S DMS 1301 B 1 
HETATM 2 O O DMS . . . G 5 10.229 35.872 -12.933 1 60.39 ? O DMS 1301 B 1 
HETATM 3 C C1 DMS . . . G 5 10.34 33.42 -13.764 1 48.21 ? C1 DMS 1301 B 1 
HETATM 4 C C2 DMS . . . G 5 8.181 34.505 -12.63 1 50.86 ? C2 DMS 1301 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#