data_4UU1 # _model_server_result.job_id cv6O44iaguPgjuE2UAbFCQ _model_server_result.datetime_utc '2025-04-07 00:32:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uu1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1003}' # _entry.id 4UU1 # _exptl.entry_id 4UU1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 650.754 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OCTANOIC ACID [3S-[3ALPHA,3ABETA,4ALPHA,6BETA,6ABETA,7BETA,8ALPHA(Z),9BALPHA]]-6-(ACETYLOXY)-2,3,-3A,4,5,6,6A,7,8,9B-DECAHYDRO-3,3A-DIHYDROXY-3,6,9-TRIMETHYL-8-[(2-METHYL-1-OXO-2-BUTENYL)OX Y]-2-OXO-4-(1-OXOBUTOXY)-AZULENO[4,5-B]FURAN-7-YL ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4UU1 _cell.length_a 71.703 _cell.length_b 71.703 _cell.length_c 591.318 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UU1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 877 A CYS 876 1_555 A SG CYS 889 A CYS 888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A C ACE 1 A ACE 0 1_555 A N MET 2 A MET 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? metalc ? metalc1 A OE1 GLN 245 A GLN 244 1_555 I K K . A K 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.844 ? metalc ? metalc2 A O LEU 712 A LEU 711 1_555 I K K . A K 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.903 ? metalc ? metalc3 A O LYS 713 A LYS 712 1_555 I K K . A K 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.045 ? metalc ? metalc4 A O ALA 715 A ALA 714 1_555 I K K . A K 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc5 A OE2 GLU 733 A GLU 732 1_555 I K K . A K 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.343 ? metalc ? metalc6 A OE1 GLU 733 A GLU 732 1_555 I K K . A K 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc7 H PB ACP . A ACP 1996 1_555 J MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc8 H O1B ACP . A ACP 1996 1_555 J MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc9 H O2B ACP . A ACP 1996 1_555 J MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? # _chem_comp.formula 'C34 H50 O12' _chem_comp.formula_weight 650.754 _chem_comp.id TG1 _chem_comp.mon_nstd_flag . _chem_comp.name 'OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, 6BETA, 6ABETA, 7BETA, 8ALPHA(Z), 9BALPHA]]-6-(ACETYLOXY)-2,3,-3A,4,5,6,6A,7,8,9B-DECAHYDRO-3,3A-DIHYDROXY-3,6,9-TRIMETHYL-8-[(2-METHYL-1-OXO-2-BUTENYL)OX Y]-2-OXO-4-(1-OXOBUTOXY)-AZULENO[4,5-B]FURAN-7-YL ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms THAPSIGARGIN # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C34 C11 TG1 sing 496 n n C34 H341 TG1 sing 497 n n C34 H342 TG1 sing 498 n n C34 H343 TG1 sing 499 n n C11 C7 TG1 sing 500 n n C11 C12 TG1 sing 501 n n C11 O11 TG1 sing 502 n n C7 C8 TG1 sing 503 n n C7 C6 TG1 sing 504 n n C7 O6 TG1 sing 505 n n C8 C9 TG1 sing 506 n n C8 O7 TG1 sing 507 n n C8 HC8 TG1 sing 508 n n C9 C10 TG1 sing 509 n n C9 HC91 TG1 sing 510 n n C9 HC92 TG1 sing 511 n n C10 C1 TG1 sing 512 n n C10 C31 TG1 sing 513 n n C10 O9 TG1 sing 514 n n C1 C2 TG1 sing 515 n n C1 C5 TG1 sing 516 n n C1 HC1 TG1 sing 517 n n C2 O1 TG1 sing 518 n n C2 C3 TG1 sing 519 n n C2 HC2 TG1 sing 520 n n O1 C13 TG1 sing 521 n n C13 O2 TG1 doub 522 n n C13 C14 TG1 sing 523 n n C14 C15 TG1 sing 524 n n C14 H141 TG1 sing 525 n n C14 H142 TG1 sing 526 n n C15 C16 TG1 sing 527 n n C15 H151 TG1 sing 528 n n C15 H152 TG1 sing 529 n n C16 C17 TG1 sing 530 n n C16 H161 TG1 sing 531 n n C16 H162 TG1 sing 532 n n C17 C18 TG1 sing 533 n n C17 H171 TG1 sing 534 n n C17 H172 TG1 sing 535 n n C18 C19 TG1 sing 536 n n C18 H181 TG1 sing 537 n n C18 H182 TG1 sing 538 n n C19 C20 TG1 sing 539 n n C19 H191 TG1 sing 540 n n C19 H192 TG1 sing 541 n n C20 H201 TG1 sing 542 n n C20 H202 TG1 sing 543 n n C20 H203 TG1 sing 544 n n C3 O3 TG1 sing 545 n n C3 C4 TG1 sing 546 n n C3 HC3 TG1 sing 547 n n O3 C21 TG1 sing 548 n n C21 O4 TG1 doub 549 n n C21 C22 TG1 sing 550 n n C22 C23 TG1 sing 551 n n C22 C24 TG1 doub 552 z n C23 H231 TG1 sing 553 n n C23 H232 TG1 sing 554 n n C23 H233 TG1 sing 555 n n C24 C25 TG1 sing 556 n n C24 H24 TG1 sing 557 n n C25 H251 TG1 sing 558 n n C25 H252 TG1 sing 559 n n C25 H253 TG1 sing 560 n n C4 C26 TG1 sing 561 n n C4 C5 TG1 doub 562 n n C26 H261 TG1 sing 563 n n C26 H262 TG1 sing 564 n n C26 H263 TG1 sing 565 n n C5 C6 TG1 sing 566 n n C6 O5 TG1 sing 567 n n C6 HC6 TG1 sing 568 n n O5 C12 TG1 sing 569 n n C12 O12 TG1 doub 570 n n C31 H311 TG1 sing 571 n n C31 H312 TG1 sing 572 n n C31 H313 TG1 sing 573 n n O9 C32 TG1 sing 574 n n C32 O10 TG1 doub 575 n n C32 C33 TG1 sing 576 n n C33 H331 TG1 sing 577 n n C33 H332 TG1 sing 578 n n C33 H333 TG1 sing 579 n n O7 C27 TG1 sing 580 n n C27 O8 TG1 doub 581 n n C27 C28 TG1 sing 582 n n C28 C29 TG1 sing 583 n n C28 H281 TG1 sing 584 n n C28 H282 TG1 sing 585 n n C29 C30 TG1 sing 586 n n C29 H291 TG1 sing 587 n n C29 H292 TG1 sing 588 n n C30 H301 TG1 sing 589 n n C30 H302 TG1 sing 590 n n C30 H303 TG1 sing 591 n n O6 HO6 TG1 sing 592 n n O11 HO11 TG1 sing 593 n n # _atom_sites.entry_id 4UU1 _atom_sites.fract_transf_matrix[1][1] 0.013946 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013946 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001691 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TG1 A 1 1003 1003 TG1 TG1 . C 3 PCW A 1 1101 1101 PCW PCW . D 3 PCW A 1 1102 1102 PCW PCW . E 3 PCW A 1 1103 1103 PCW PCW . F 4 GOL A 1 1301 1301 GOL GOL . G 4 GOL A 1 1302 1302 GOL GOL . H 5 ACP A 1 1996 1996 ACP ACP . I 6 K A 1 2001 2001 K K . J 7 MG A 1 2002 2002 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C34 TG1 . . . B 2 -25.214 40.589 -57.254 1 93.85 ? C34 TG1 1003 A 1 HETATM 2 C C11 TG1 . . . B 2 -24.935 39.767 -58.505 1 88.96 ? C11 TG1 1003 A 1 HETATM 3 C C7 TG1 . . . B 2 -24.984 40.558 -59.874 1 72.4 ? C7 TG1 1003 A 1 HETATM 4 C C8 TG1 . . . B 2 -23.857 41.546 -60.163 1 76.79 ? C8 TG1 1003 A 1 HETATM 5 C C9 TG1 . . . B 2 -24.088 42.457 -61.391 1 77.74 ? C9 TG1 1003 A 1 HETATM 6 C C10 TG1 . . . B 2 -24.447 41.918 -62.796 1 77.96 ? C10 TG1 1003 A 1 HETATM 7 C C1 TG1 . . . B 2 -25.729 41.079 -62.919 1 95.7 ? C1 TG1 1003 A 1 HETATM 8 C C2 TG1 . . . B 2 -26.014 40.832 -64.422 1 104.04 ? C2 TG1 1003 A 1 HETATM 9 O O1 TG1 . . . B 2 -27.364 41.147 -64.732 1 113.02 ? O1 TG1 1003 A 1 HETATM 10 C C13 TG1 . . . B 2 -27.565 41.726 -65.97 1 109.55 ? C13 TG1 1003 A 1 HETATM 11 O O2 TG1 . . . B 2 -26.657 42.352 -66.487 1 101.04 ? O2 TG1 1003 A 1 HETATM 12 C C14 TG1 . . . B 2 -28.961 41.557 -66.526 1 110.06 ? C14 TG1 1003 A 1 HETATM 13 C C15 TG1 . . . B 2 -29.026 40.625 -67.751 1 111.06 ? C15 TG1 1003 A 1 HETATM 14 C C16 TG1 . . . B 2 -28.778 41.265 -69.124 1 105.98 ? C16 TG1 1003 A 1 HETATM 15 C C17 TG1 . . . B 2 -29.282 40.366 -70.269 1 100.24 ? C17 TG1 1003 A 1 HETATM 16 C C18 TG1 . . . B 2 -28.265 40.044 -71.37 1 94.77 ? C18 TG1 1003 A 1 HETATM 17 C C19 TG1 . . . B 2 -28.804 40.197 -72.796 1 89.12 ? C19 TG1 1003 A 1 HETATM 18 C C20 TG1 . . . B 2 -29.088 41.646 -73.151 1 85.85 ? C20 TG1 1003 A 1 HETATM 19 C C3 TG1 . . . B 2 -25.832 39.314 -64.706 1 102.58 ? C3 TG1 1003 A 1 HETATM 20 O O3 TG1 . . . B 2 -24.622 39.183 -65.419 1 111.38 ? O3 TG1 1003 A 1 HETATM 21 C C21 TG1 . . . B 2 -24.721 38.675 -66.704 1 108.05 ? C21 TG1 1003 A 1 HETATM 22 O O4 TG1 . . . B 2 -25.444 37.72 -66.849 1 104.51 ? O4 TG1 1003 A 1 HETATM 23 C C22 TG1 . . . B 2 -23.654 39.128 -67.67 1 109.67 ? C22 TG1 1003 A 1 HETATM 24 C C23 TG1 . . . B 2 -24.181 38.944 -69.104 1 114.86 ? C23 TG1 1003 A 1 HETATM 25 C C24 TG1 . . . B 2 -22.289 38.437 -67.583 1 106.93 ? C24 TG1 1003 A 1 HETATM 26 C C25 TG1 . . . B 2 -21.594 38.445 -66.242 1 106.86 ? C25 TG1 1003 A 1 HETATM 27 C C4 TG1 . . . B 2 -25.788 38.632 -63.318 1 91.43 ? C4 TG1 1003 A 1 HETATM 28 C C26 TG1 . . . B 2 -24.75 37.532 -63.263 1 82.94 ? C26 TG1 1003 A 1 HETATM 29 C C5 TG1 . . . B 2 -25.85 39.711 -62.215 1 94.46 ? C5 TG1 1003 A 1 HETATM 30 C C6 TG1 . . . B 2 -25.096 39.399 -60.906 1 94.25 ? C6 TG1 1003 A 1 HETATM 31 O O5 TG1 . . . B 2 -25.894 38.438 -60.213 1 96.8 ? O5 TG1 1003 A 1 HETATM 32 C C12 TG1 . . . B 2 -26.102 38.786 -58.86 1 90.15 ? C12 TG1 1003 A 1 HETATM 33 O O12 TG1 . . . B 2 -26.06 37.602 -58.135 1 85.72 ? O12 TG1 1003 A 1 HETATM 34 C C31 TG1 . . . B 2 -23.217 41.298 -63.464 1 60.39 ? C31 TG1 1003 A 1 HETATM 35 O O9 TG1 . . . B 2 -24.642 43.064 -63.626 1 72.72 ? O9 TG1 1003 A 1 HETATM 36 C C32 TG1 . . . B 2 -24.002 44.245 -63.731 1 73.75 ? C32 TG1 1003 A 1 HETATM 37 O O10 TG1 . . . B 2 -22.795 44.361 -63.681 1 78.63 ? O10 TG1 1003 A 1 HETATM 38 C C33 TG1 . . . B 2 -24.994 45.2 -64.338 1 67.18 ? C33 TG1 1003 A 1 HETATM 39 O O7 TG1 . . . B 2 -22.635 40.858 -60.229 1 81.64 ? O7 TG1 1003 A 1 HETATM 40 C C27 TG1 . . . B 2 -21.761 41.028 -59.183 1 75.57 ? C27 TG1 1003 A 1 HETATM 41 O O8 TG1 . . . B 2 -22.157 41.47 -58.115 1 75.54 ? O8 TG1 1003 A 1 HETATM 42 C C28 TG1 . . . B 2 -20.501 40.244 -59.389 1 68 ? C28 TG1 1003 A 1 HETATM 43 C C29 TG1 . . . B 2 -20.161 39.378 -58.177 1 64 ? C29 TG1 1003 A 1 HETATM 44 C C30 TG1 . . . B 2 -18.83 39.855 -57.607 1 60.16 ? C30 TG1 1003 A 1 HETATM 45 O O6 TG1 . . . B 2 -26.201 41.246 -59.839 1 74.44 ? O6 TG1 1003 A 1 HETATM 46 O O11 TG1 . . . B 2 -23.703 39.134 -58.413 1 84.55 ? O11 TG1 1003 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 46 #