data_4UUB
#
_model_server_result.job_id            O27AIuyk7NORyL47742vxQ 
_model_server_result.datetime_utc      '2025-02-17 15:19:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4uub 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":1004}' 
#
_entry.id    4UUB 
#
_exptl.entry_id    4UUB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              174.194 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2-butylbutanedioic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4UUB 
_cell.length_a            87.44 
_cell.length_b            87.44 
_cell.length_c            315.06 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4UUB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,K,L 1 1 
B,F,G,H,I,J,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      8 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 251 A CYS 274 1_555 B SG CYS 251 B CYS 274 12_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
covale ? covale1 C C BEZ 1 D BEZ 0 1_555 C N GLY 2 D GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? 
covale ? covale2 C NZ LYS 5 D LYS 4 1_555 K CAJ SU8 . D SU8 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? 
metalc ? metalc1 A SG CYS 139 A CYS 162 1_555 D ZN ZN . A ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc2 A SG CYS 142 A CYS 165 1_555 D ZN ZN . A ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc3 A SG CYS 180 A CYS 203 1_555 D ZN ZN . A ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc4 A SG CYS 185 A CYS 208 1_555 D ZN ZN . A ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? 
metalc ? metalc5 B SG CYS 139 B CYS 162 1_555 F ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc6 B SG CYS 142 B CYS 165 1_555 F ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc7 B SG CYS 180 B CYS 203 1_555 F ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc8 B SG CYS 185 B CYS 208 1_555 F ZN ZN . B ZN 1299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc9 B OD2 ASP 201 B ASP 224 1_555 I NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? 
metalc ? metalc10 B OD2 ASP 201 B ASP 224 12_544 I NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? 
metalc ? metalc11 B OD2 ASP 203 B ASP 226 1_555 I NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? 
metalc ? metalc12 B OD2 ASP 203 B ASP 226 12_544 I NA NA . B NA 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? 
#
_chem_comp.formula           'C8 H14 O4' 
_chem_comp.formula_weight    174.194 
_chem_comp.id                SU8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2-butylbutanedioic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '(2R)-2-butylsuccinic acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAK CAJ SU8 sing 356 n n 
OAM CAJ SU8 doub 357 n n 
CAJ OXT SU8 sing 358 n n 
CAL CAK SU8 sing 359 n n 
CAQ CAK SU8 sing 360 n n 
CAK HAK SU8 sing 361 n n 
CAN CAL SU8 sing 362 n n 
CAL HAL SU8 sing 363 n n 
CAL HALA SU8 sing 364 n n 
OAP CAN SU8 doub 365 n n 
CAN OAO SU8 sing 366 n n 
OAO HOAO SU8 sing 367 n n 
CAQ CAR SU8 sing 368 n n 
CAQ HAQ SU8 sing 369 n n 
CAQ HAQA SU8 sing 370 n n 
CAS CAR SU8 sing 371 n n 
CAR HAR SU8 sing 372 n n 
CAR HARA SU8 sing 373 n n 
CAT CAS SU8 sing 374 n n 
CAS HAS SU8 sing 375 n n 
CAS HASA SU8 sing 376 n n 
CAT HAT SU8 sing 377 n n 
CAT HATA SU8 sing 378 n n 
CAT HATB SU8 sing 379 n n 
OXT HOXT SU8 sing 380 n n 
#
_atom_sites.entry_id                     4UUB 
_atom_sites.fract_transf_matrix[1][1]    0.011436 
_atom_sites.fract_transf_matrix[1][2]    0.006603 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013206 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003174 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 ZN A 1 1299 1299 ZN ZN . 
E 4 EDO A 1 1300 1300 EDO EDO . 
F 3 ZN B 1 1299 1299 ZN ZN . 
G 5 EPE B 1 1300 1300 EPE EPE . 
H 6 DMS B 1 1301 1301 DMS DMS . 
I 7 NA B 1 1302 1302 NA NA . 
J 4 EDO B 1 1303 1303 EDO EDO . 
K 8 SU8 D 1 1004 1004 SU8 SU8 . 
L 9 HOH A 1 2001 2001 HOH HOH . 
L 9 HOH A 2 2002 2002 HOH HOH . 
L 9 HOH A 3 2003 2003 HOH HOH . 
L 9 HOH A 4 2004 2004 HOH HOH . 
L 9 HOH A 5 2005 2005 HOH HOH . 
L 9 HOH A 6 2006 2006 HOH HOH . 
L 9 HOH A 7 2007 2007 HOH HOH . 
L 9 HOH A 8 2008 2008 HOH HOH . 
L 9 HOH A 9 2009 2009 HOH HOH . 
L 9 HOH A 10 2010 2010 HOH HOH . 
L 9 HOH A 11 2011 2011 HOH HOH . 
L 9 HOH A 12 2012 2012 HOH HOH . 
L 9 HOH A 13 2013 2013 HOH HOH . 
L 9 HOH A 14 2014 2014 HOH HOH . 
L 9 HOH A 15 2015 2015 HOH HOH . 
L 9 HOH A 16 2016 2016 HOH HOH . 
L 9 HOH A 17 2017 2017 HOH HOH . 
L 9 HOH A 18 2018 2018 HOH HOH . 
L 9 HOH A 19 2019 2019 HOH HOH . 
L 9 HOH A 20 2020 2020 HOH HOH . 
L 9 HOH A 21 2021 2021 HOH HOH . 
L 9 HOH A 22 2022 2022 HOH HOH . 
L 9 HOH A 23 2023 2023 HOH HOH . 
L 9 HOH A 24 2024 2024 HOH HOH . 
L 9 HOH A 25 2025 2025 HOH HOH . 
L 9 HOH A 26 2026 2026 HOH HOH . 
L 9 HOH A 27 2027 2027 HOH HOH . 
L 9 HOH A 28 2028 2028 HOH HOH . 
L 9 HOH A 29 2029 2029 HOH HOH . 
L 9 HOH A 30 2030 2030 HOH HOH . 
L 9 HOH A 31 2031 2031 HOH HOH . 
L 9 HOH A 32 2032 2032 HOH HOH . 
L 9 HOH A 33 2033 2033 HOH HOH . 
L 9 HOH A 34 2034 2034 HOH HOH . 
L 9 HOH A 35 2035 2035 HOH HOH . 
L 9 HOH A 36 2036 2036 HOH HOH . 
L 9 HOH A 37 2037 2037 HOH HOH . 
L 9 HOH A 38 2038 2038 HOH HOH . 
L 9 HOH A 39 2039 2039 HOH HOH . 
M 9 HOH B 1 2001 2001 HOH HOH . 
M 9 HOH B 2 2002 2002 HOH HOH . 
M 9 HOH B 3 2003 2003 HOH HOH . 
M 9 HOH B 4 2004 2004 HOH HOH . 
M 9 HOH B 5 2005 2005 HOH HOH . 
M 9 HOH B 6 2006 2006 HOH HOH . 
M 9 HOH B 7 2007 2007 HOH HOH . 
M 9 HOH B 8 2008 2008 HOH HOH . 
M 9 HOH B 9 2009 2009 HOH HOH . 
M 9 HOH B 10 2010 2010 HOH HOH . 
M 9 HOH B 11 2011 2011 HOH HOH . 
M 9 HOH B 12 2012 2012 HOH HOH . 
M 9 HOH B 13 2013 2013 HOH HOH . 
M 9 HOH B 14 2014 2014 HOH HOH . 
M 9 HOH B 15 2015 2015 HOH HOH . 
M 9 HOH B 16 2016 2016 HOH HOH . 
M 9 HOH B 17 2017 2017 HOH HOH . 
M 9 HOH B 18 2018 2018 HOH HOH . 
M 9 HOH B 19 2019 2019 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAJ SU8 . . . K 8 -31.254 -24.605 -4.801 1 40.23 ? CAJ SU8 1004 D 1 
HETATM 2 C CAK SU8 . . . K 8 -31.016 -25.887 -5.539 1 44.9 ? CAK SU8 1004 D 1 
HETATM 3 C CAL SU8 . . . K 8 -32.02 -25.808 -6.699 1 45.96 ? CAL SU8 1004 D 1 
HETATM 4 O OAM SU8 . . . K 8 -31.223 -23.519 -5.36 1 35.64 ? OAM SU8 1004 D 1 
HETATM 5 C CAN SU8 . . . K 8 -31.571 -26.798 -7.751 1 45.65 ? CAN SU8 1004 D 1 
HETATM 6 O OAO SU8 . . . K 8 -30.889 -26.332 -8.68 1 45.12 ? OAO SU8 1004 D 1 
HETATM 7 O OAP SU8 . . . K 8 -31.909 -27.987 -7.606 1 44.94 ? OAP SU8 1004 D 1 
HETATM 8 C CAQ SU8 . . . K 8 -29.508 -26.136 -5.846 1 45.03 ? CAQ SU8 1004 D 1 
HETATM 9 C CAR SU8 . . . K 8 -28.557 -25.002 -5.396 1 45.27 ? CAR SU8 1004 D 1 
HETATM 10 C CAS SU8 . . . K 8 -28.454 -24.01 -6.572 1 47.18 ? CAS SU8 1004 D 1 
HETATM 11 C CAT SU8 . . . K 8 -27.287 -24.448 -7.489 1 46.92 ? CAT SU8 1004 D 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           11 
#