data_4UUJ # _model_server_result.job_id DabKQRC1zD-dBZCacgbaiA _model_server_result.datetime_utc '2024-11-05 04:12:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uuj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1220}' # _entry.id 4UUJ # _exptl.entry_id 4UUJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 144.254 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NONAN-1-OL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4UUJ _cell.length_a 154.615 _cell.length_b 154.615 _cell.length_c 75.953 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UUJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 3 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 O N N ? 4 P N N ? 4 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf2 A SG CYS 145 A CYS 145 1_555 A SG CYS 200 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf3 B SG CYS 23 B CYS 23 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf4 B SG CYS 134 B CYS 134 1_555 B SG CYS 194 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 C O THR 62 C THR 75 4_555 H K K . C K 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc2 C O THR 62 C THR 75 3_555 H K K . C K 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc3 C O THR 62 C THR 75 2_555 H K K . C K 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc4 C O THR 62 C THR 75 1_555 H K K . C K 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc5 C OG1 THR 62 C THR 75 1_555 I K K . C K 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc6 C OG1 THR 62 C THR 75 2_555 I K K . C K 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc7 C OG1 THR 62 C THR 75 3_555 I K K . C K 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc8 C OG1 THR 62 C THR 75 4_555 I K K . C K 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc9 C O THR 62 C THR 75 1_555 I K K . C K 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.058 ? metalc ? metalc10 C O THR 62 C THR 75 2_555 I K K . C K 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.058 ? metalc ? metalc11 C O THR 62 C THR 75 3_555 I K K . C K 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.058 ? metalc ? metalc12 C O THR 62 C THR 75 4_555 I K K . C K 1128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.058 ? metalc ? metalc13 C O VAL 63 C VAL 76 1_555 G K K . C K 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc14 C O VAL 63 C VAL 76 2_555 G K K . C K 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc15 C O VAL 63 C VAL 76 3_555 G K K . C K 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc16 C O VAL 63 C VAL 76 4_555 G K K . C K 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc17 C O VAL 63 C VAL 76 1_555 H K K . C K 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.969 ? metalc ? metalc18 C O VAL 63 C VAL 76 2_555 H K K . C K 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.969 ? metalc ? metalc19 C O VAL 63 C VAL 76 3_555 H K K . C K 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.969 ? metalc ? metalc20 C O VAL 63 C VAL 76 4_555 H K K . C K 1127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.969 ? metalc ? metalc21 C O GLY 64 C GLY 77 1_555 F K K . C K 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.178 ? metalc ? metalc22 C O GLY 64 C GLY 77 2_555 F K K . C K 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.178 ? metalc ? metalc23 C O GLY 64 C GLY 77 3_555 F K K . C K 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.178 ? metalc ? metalc24 C O GLY 64 C GLY 77 4_555 F K K . C K 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.178 ? metalc ? metalc25 C O GLY 64 C GLY 77 1_555 G K K . C K 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc26 C O GLY 64 C GLY 77 2_555 G K K . C K 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc27 C O GLY 64 C GLY 77 3_555 G K K . C K 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc28 C O GLY 64 C GLY 77 4_555 G K K . C K 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc29 C O TYR 65 C TYR 78 1_555 F K K . C K 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.946 ? metalc ? metalc30 C O TYR 65 C TYR 78 2_555 F K K . C K 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.946 ? metalc ? metalc31 C O TYR 65 C TYR 78 3_555 F K K . C K 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.946 ? metalc ? metalc32 C O TYR 65 C TYR 78 4_555 F K K . C K 1125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.946 ? metalc ? metalc33 C NE2 HIS 111 C HIS 124 4_555 K CO CO . C CO 1130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc34 C NE2 HIS 111 C HIS 124 3_555 K CO CO . C CO 1130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc35 C NE2 HIS 111 C HIS 124 2_555 K CO CO . C CO 1130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc36 C NE2 HIS 111 C HIS 124 1_555 K CO CO . C CO 1130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? # _chem_comp.formula 'C9 H20 O' _chem_comp.formula_weight 144.254 _chem_comp.id F09 _chem_comp.mon_nstd_flag . _chem_comp.name NONAN-1-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 F09 sing 202 n n C1 H11 F09 sing 203 n n C1 H12 F09 sing 204 n n C1 H13 F09 sing 205 n n C2 C3 F09 sing 206 n n C2 H21 F09 sing 207 n n C2 H22 F09 sing 208 n n C3 C4 F09 sing 209 n n C3 H31 F09 sing 210 n n C3 H32 F09 sing 211 n n C4 C5 F09 sing 212 n n C4 H41 F09 sing 213 n n C4 H42 F09 sing 214 n n C5 C6 F09 sing 215 n n C5 H51 F09 sing 216 n n C5 H52 F09 sing 217 n n C6 C7 F09 sing 218 n n C6 H61 F09 sing 219 n n C6 H62 F09 sing 220 n n C7 C8 F09 sing 221 n n C7 H71 F09 sing 222 n n C7 H72 F09 sing 223 n n C8 C9 F09 sing 224 n n C8 H81 F09 sing 225 n n C8 H82 F09 sing 226 n n C9 OXT F09 sing 227 n n C9 H91 F09 sing 228 n n C9 H92 F09 sing 229 n n OXT HXT F09 sing 230 n n # _atom_sites.entry_id 4UUJ _atom_sites.fract_transf_matrix[1][1] 0.006468 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006468 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013166 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 F09 A 1 1220 1220 F09 F09 . E 5 IND B 1 1213 1213 IND IND . F 6 K C 1 1125 1125 K K . G 6 K C 1 1126 1126 K K . H 6 K C 1 1127 1127 K K . I 6 K C 1 1128 1128 K K . J 7 DGA C 1 1129 1129 DGA DGA . K 8 CO C 1 1130 1130 CO CO . L 9 XA7 C 1 1131 1131 XA7 XA7 . M 9 XA7 C 1 1132 1132 XA7 XA7 . N 10 PO4 C 1 1133 1133 PO4 PO4 . O 4 F09 C 1 1134 1134 F09 F09 . P 4 F09 C 1 1135 1135 F09 F09 . Q 4 F09 C 1 1136 1136 F09 F09 . R 11 HOH A 1 2001 2001 HOH HOH . R 11 HOH A 2 2002 2002 HOH HOH . R 11 HOH A 3 2003 2003 HOH HOH . R 11 HOH A 4 2004 2004 HOH HOH . R 11 HOH A 5 2005 2005 HOH HOH . R 11 HOH A 6 2006 2006 HOH HOH . R 11 HOH A 7 2007 2007 HOH HOH . R 11 HOH A 8 2008 2008 HOH HOH . R 11 HOH A 9 2009 2009 HOH HOH . R 11 HOH A 10 2010 2010 HOH HOH . R 11 HOH A 11 2011 2011 HOH HOH . R 11 HOH A 12 2012 2012 HOH HOH . R 11 HOH A 13 2013 2013 HOH HOH . R 11 HOH A 14 2014 2014 HOH HOH . R 11 HOH A 15 2015 2015 HOH HOH . R 11 HOH A 16 2016 2016 HOH HOH . R 11 HOH A 17 2017 2017 HOH HOH . R 11 HOH A 18 2018 2018 HOH HOH . R 11 HOH A 19 2019 2019 HOH HOH . R 11 HOH A 20 2020 2020 HOH HOH . R 11 HOH A 21 2021 2021 HOH HOH . R 11 HOH A 22 2022 2022 HOH HOH . R 11 HOH A 23 2023 2023 HOH HOH . R 11 HOH A 24 2024 2024 HOH HOH . R 11 HOH A 25 2025 2025 HOH HOH . R 11 HOH A 26 2026 2026 HOH HOH . R 11 HOH A 27 2027 2027 HOH HOH . R 11 HOH A 28 2028 2028 HOH HOH . R 11 HOH A 29 2029 2029 HOH HOH . R 11 HOH A 30 2031 2031 HOH HOH . R 11 HOH A 31 2032 2032 HOH HOH . R 11 HOH A 32 2033 2033 HOH HOH . R 11 HOH A 33 2034 2034 HOH HOH . R 11 HOH A 34 2035 2035 HOH HOH . R 11 HOH A 35 2036 2036 HOH HOH . R 11 HOH A 36 2037 2037 HOH HOH . R 11 HOH A 37 2038 2038 HOH HOH . R 11 HOH A 38 2039 2039 HOH HOH . R 11 HOH A 39 2040 2040 HOH HOH . R 11 HOH A 40 2041 2041 HOH HOH . S 11 HOH B 1 2001 2001 HOH HOH . S 11 HOH B 2 2002 2002 HOH HOH . S 11 HOH B 3 2003 2003 HOH HOH . S 11 HOH B 4 2004 2004 HOH HOH . S 11 HOH B 5 2005 2005 HOH HOH . S 11 HOH B 6 2006 2006 HOH HOH . S 11 HOH B 7 2007 2007 HOH HOH . S 11 HOH B 8 2008 2008 HOH HOH . S 11 HOH B 9 2009 2009 HOH HOH . S 11 HOH B 10 2010 2010 HOH HOH . S 11 HOH B 11 2011 2011 HOH HOH . S 11 HOH B 12 2012 2012 HOH HOH . S 11 HOH B 13 2013 2013 HOH HOH . S 11 HOH B 14 2014 2014 HOH HOH . S 11 HOH B 15 2015 2015 HOH HOH . S 11 HOH B 16 2016 2016 HOH HOH . S 11 HOH B 17 2017 2017 HOH HOH . S 11 HOH B 18 2018 2018 HOH HOH . S 11 HOH B 19 2019 2019 HOH HOH . S 11 HOH B 20 2020 2020 HOH HOH . S 11 HOH B 21 2021 2021 HOH HOH . S 11 HOH B 22 2022 2022 HOH HOH . S 11 HOH B 23 2023 2023 HOH HOH . S 11 HOH B 24 2024 2024 HOH HOH . S 11 HOH B 25 2025 2025 HOH HOH . S 11 HOH B 26 2026 2026 HOH HOH . S 11 HOH B 27 2027 2027 HOH HOH . S 11 HOH B 28 2028 2028 HOH HOH . S 11 HOH B 29 2029 2029 HOH HOH . S 11 HOH B 30 2030 2030 HOH HOH . S 11 HOH B 31 2031 2031 HOH HOH . S 11 HOH B 32 2032 2032 HOH HOH . S 11 HOH B 33 2033 2033 HOH HOH . S 11 HOH B 34 2034 2034 HOH HOH . S 11 HOH B 35 2035 2035 HOH HOH . T 11 HOH C 1 2001 2001 HOH HOH . T 11 HOH C 2 2002 2002 HOH HOH . T 11 HOH C 3 2003 2003 HOH HOH . T 11 HOH C 4 2004 2004 HOH HOH . T 11 HOH C 5 2005 2005 HOH HOH . T 11 HOH C 6 2006 2006 HOH HOH . T 11 HOH C 7 2007 2007 HOH HOH . T 11 HOH C 8 2010 2010 HOH HOH . T 11 HOH C 9 2011 2011 HOH HOH . T 11 HOH C 10 2012 2012 HOH HOH . T 11 HOH C 11 2013 2013 HOH HOH . T 11 HOH C 12 2014 2014 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 F09 . . . D 4 21.61 1.994 -38.849 1 74.13 ? C1 F09 1220 A 1 HETATM 2 C C2 F09 . . . D 4 22.696 2.098 -37.779 1 84.42 ? C2 F09 1220 A 1 HETATM 3 C C3 F09 . . . D 4 22.769 0.856 -36.864 1 82.8 ? C3 F09 1220 A 1 HETATM 4 C C4 F09 . . . D 4 23.926 0.824 -35.843 1 79.1 ? C4 F09 1220 A 1 HETATM 5 C C5 F09 . . . D 4 23.655 -0.034 -34.576 1 70.18 ? C5 F09 1220 A 1 HETATM 6 C C6 F09 . . . D 4 24.872 -0.169 -33.634 1 70.3 ? C6 F09 1220 A 1 HETATM 7 C C7 F09 . . . D 4 24.65 0.128 -32.139 1 74.28 ? C7 F09 1220 A 1 HETATM 8 C C8 F09 . . . D 4 25.853 0.703 -31.36 1 79.43 ? C8 F09 1220 A 1 HETATM 9 C C9 F09 . . . D 4 25.621 0.772 -29.843 1 86.46 ? C9 F09 1220 A 1 HETATM 10 O OXT F09 . . . D 4 26.076 1.683 -29.134 1 84.05 ? OXT F09 1220 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #