data_4UUU
#
_model_server_result.job_id            GPxJWWxL1YHJtYctRdeWhA 
_model_server_result.datetime_utc      '2024-11-01 01:21:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4uuu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1546}' 
#
_entry.id    4UUU 
#
_exptl.entry_id    4UUU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              398.437 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-ADENOSYLMETHIONINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4UUU 
_cell.length_a            39.85 
_cell.length_b            78.65 
_cell.length_c            90.8 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4UUU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 K N N 
#
_chem_comp.formula           'C15 H22 N6 O5 S' 
_chem_comp.formula_weight    398.437 
_chem_comp.id                SAM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              S-ADENOSYLMETHIONINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SAM sing 286 n n 
N HN1 SAM sing 287 n n 
N HN2 SAM sing 288 n n 
CA C SAM sing 289 n n 
CA CB SAM sing 290 n n 
CA HA SAM sing 291 n n 
C O SAM doub 292 n n 
C OXT SAM sing 293 n n 
CB CG SAM sing 294 n n 
CB HB1 SAM sing 295 n n 
CB HB2 SAM sing 296 n n 
CG SD SAM sing 297 n n 
CG HG1 SAM sing 298 n n 
CG HG2 SAM sing 299 n n 
SD CE SAM sing 300 n n 
SD C5' SAM sing 301 n n 
CE HE1 SAM sing 302 n n 
CE HE2 SAM sing 303 n n 
CE HE3 SAM sing 304 n n 
C5' C4' SAM sing 305 n n 
C5' "H5'1" SAM sing 306 n n 
C5' "H5'2" SAM sing 307 n n 
C4' O4' SAM sing 308 n n 
C4' C3' SAM sing 309 n n 
C4' H4' SAM sing 310 n n 
O4' C1' SAM sing 311 n n 
C3' O3' SAM sing 312 n n 
C3' C2' SAM sing 313 n n 
C3' H3' SAM sing 314 n n 
O3' HO3' SAM sing 315 n n 
C2' O2' SAM sing 316 n n 
C2' C1' SAM sing 317 n n 
C2' H2' SAM sing 318 n n 
O2' HO2' SAM sing 319 n n 
C1' N9 SAM sing 320 n n 
C1' H1' SAM sing 321 n n 
N9 C8 SAM sing 322 n y 
N9 C4 SAM sing 323 n y 
C8 N7 SAM doub 324 n y 
C8 H8 SAM sing 325 n n 
N7 C5 SAM sing 326 n y 
C5 C6 SAM sing 327 n y 
C5 C4 SAM doub 328 n y 
C6 N6 SAM sing 329 n n 
C6 N1 SAM doub 330 n y 
N6 HN61 SAM sing 331 n n 
N6 HN62 SAM sing 332 n n 
N1 C2 SAM sing 333 n y 
C2 N3 SAM doub 334 n y 
C2 H2 SAM sing 335 n n 
N3 C4 SAM sing 336 n y 
#
_atom_sites.entry_id                     4UUU 
_atom_sites.fract_transf_matrix[1][1]    0.025094 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012715 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011013 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SAM A 1 1546 1546 SAM SAM . 
D 3 EDO A 1 1547 1547 EDO EDO . 
E 3 EDO A 1 1548 1548 EDO EDO . 
F 3 EDO A 1 1549 1549 EDO EDO . 
G 3 EDO A 1 1550 1550 EDO EDO . 
H 3 EDO A 1 1551 1551 EDO EDO . 
I 3 EDO A 1 1552 1552 EDO EDO . 
J 3 EDO A 1 1553 1553 EDO EDO . 
K 2 SAM B 1 1548 1548 SAM SAM . 
L 3 EDO B 1 1549 1549 EDO EDO . 
M 3 EDO B 1 1550 1550 EDO EDO . 
N 3 EDO B 1 1551 1551 EDO EDO . 
O 3 EDO B 1 1552 1552 EDO EDO . 
P 3 EDO B 1 1553 1553 EDO EDO . 
Q 4 HOH A 1 2001 2001 HOH HOH . 
Q 4 HOH A 2 2002 2002 HOH HOH . 
Q 4 HOH A 3 2003 2003 HOH HOH . 
Q 4 HOH A 4 2004 2004 HOH HOH . 
Q 4 HOH A 5 2005 2005 HOH HOH . 
Q 4 HOH A 6 2006 2006 HOH HOH . 
Q 4 HOH A 7 2007 2007 HOH HOH . 
Q 4 HOH A 8 2008 2008 HOH HOH . 
Q 4 HOH A 9 2009 2009 HOH HOH . 
Q 4 HOH A 10 2010 2010 HOH HOH . 
Q 4 HOH A 11 2011 2011 HOH HOH . 
Q 4 HOH A 12 2012 2012 HOH HOH . 
Q 4 HOH A 13 2013 2013 HOH HOH . 
Q 4 HOH A 14 2014 2014 HOH HOH . 
Q 4 HOH A 15 2015 2015 HOH HOH . 
Q 4 HOH A 16 2016 2016 HOH HOH . 
Q 4 HOH A 17 2017 2017 HOH HOH . 
Q 4 HOH A 18 2018 2018 HOH HOH . 
Q 4 HOH A 19 2019 2019 HOH HOH . 
Q 4 HOH A 20 2020 2020 HOH HOH . 
Q 4 HOH A 21 2021 2021 HOH HOH . 
Q 4 HOH A 22 2022 2022 HOH HOH . 
Q 4 HOH A 23 2023 2023 HOH HOH . 
Q 4 HOH A 24 2024 2024 HOH HOH . 
Q 4 HOH A 25 2025 2025 HOH HOH . 
Q 4 HOH A 26 2026 2026 HOH HOH . 
Q 4 HOH A 27 2027 2027 HOH HOH . 
Q 4 HOH A 28 2028 2028 HOH HOH . 
Q 4 HOH A 29 2029 2029 HOH HOH . 
Q 4 HOH A 30 2030 2030 HOH HOH . 
Q 4 HOH A 31 2031 2031 HOH HOH . 
Q 4 HOH A 32 2032 2032 HOH HOH . 
Q 4 HOH A 33 2033 2033 HOH HOH . 
Q 4 HOH A 34 2034 2034 HOH HOH . 
Q 4 HOH A 35 2035 2035 HOH HOH . 
Q 4 HOH A 36 2036 2036 HOH HOH . 
Q 4 HOH A 37 2037 2037 HOH HOH . 
Q 4 HOH A 38 2038 2038 HOH HOH . 
Q 4 HOH A 39 2039 2039 HOH HOH . 
Q 4 HOH A 40 2040 2040 HOH HOH . 
Q 4 HOH A 41 2041 2041 HOH HOH . 
Q 4 HOH A 42 2042 2042 HOH HOH . 
Q 4 HOH A 43 2043 2043 HOH HOH . 
Q 4 HOH A 44 2044 2044 HOH HOH . 
Q 4 HOH A 45 2045 2045 HOH HOH . 
Q 4 HOH A 46 2046 2046 HOH HOH . 
Q 4 HOH A 47 2047 2047 HOH HOH . 
Q 4 HOH A 48 2048 2048 HOH HOH . 
Q 4 HOH A 49 2049 2049 HOH HOH . 
Q 4 HOH A 50 2050 2050 HOH HOH . 
Q 4 HOH A 51 2051 2051 HOH HOH . 
Q 4 HOH A 52 2052 2052 HOH HOH . 
Q 4 HOH A 53 2053 2053 HOH HOH . 
Q 4 HOH A 54 2054 2054 HOH HOH . 
Q 4 HOH A 55 2055 2055 HOH HOH . 
Q 4 HOH A 56 2056 2056 HOH HOH . 
Q 4 HOH A 57 2057 2057 HOH HOH . 
Q 4 HOH A 58 2058 2058 HOH HOH . 
Q 4 HOH A 59 2059 2059 HOH HOH . 
Q 4 HOH A 60 2060 2060 HOH HOH . 
Q 4 HOH A 61 2061 2061 HOH HOH . 
Q 4 HOH A 62 2062 2062 HOH HOH . 
Q 4 HOH A 63 2063 2063 HOH HOH . 
Q 4 HOH A 64 2064 2064 HOH HOH . 
Q 4 HOH A 65 2065 2065 HOH HOH . 
Q 4 HOH A 66 2066 2066 HOH HOH . 
Q 4 HOH A 67 2067 2067 HOH HOH . 
Q 4 HOH A 68 2068 2068 HOH HOH . 
Q 4 HOH A 69 2069 2069 HOH HOH . 
Q 4 HOH A 70 2070 2070 HOH HOH . 
Q 4 HOH A 71 2071 2071 HOH HOH . 
Q 4 HOH A 72 2072 2072 HOH HOH . 
Q 4 HOH A 73 2073 2073 HOH HOH . 
Q 4 HOH A 74 2074 2074 HOH HOH . 
Q 4 HOH A 75 2075 2075 HOH HOH . 
Q 4 HOH A 76 2076 2076 HOH HOH . 
Q 4 HOH A 77 2077 2077 HOH HOH . 
Q 4 HOH A 78 2078 2078 HOH HOH . 
Q 4 HOH A 79 2079 2079 HOH HOH . 
Q 4 HOH A 80 2080 2080 HOH HOH . 
Q 4 HOH A 81 2081 2081 HOH HOH . 
Q 4 HOH A 82 2082 2082 HOH HOH . 
Q 4 HOH A 83 2083 2083 HOH HOH . 
Q 4 HOH A 84 2084 2084 HOH HOH . 
Q 4 HOH A 85 2085 2085 HOH HOH . 
R 4 HOH B 1 2001 2001 HOH HOH . 
R 4 HOH B 2 2002 2002 HOH HOH . 
R 4 HOH B 3 2003 2003 HOH HOH . 
R 4 HOH B 4 2004 2004 HOH HOH . 
R 4 HOH B 5 2005 2005 HOH HOH . 
R 4 HOH B 6 2006 2006 HOH HOH . 
R 4 HOH B 7 2007 2007 HOH HOH . 
R 4 HOH B 8 2008 2008 HOH HOH . 
R 4 HOH B 9 2009 2009 HOH HOH . 
R 4 HOH B 10 2010 2010 HOH HOH . 
R 4 HOH B 11 2011 2011 HOH HOH . 
R 4 HOH B 12 2012 2012 HOH HOH . 
R 4 HOH B 13 2013 2013 HOH HOH . 
R 4 HOH B 14 2014 2014 HOH HOH . 
R 4 HOH B 15 2015 2015 HOH HOH . 
R 4 HOH B 16 2016 2016 HOH HOH . 
R 4 HOH B 17 2017 2017 HOH HOH . 
R 4 HOH B 18 2018 2018 HOH HOH . 
R 4 HOH B 19 2019 2019 HOH HOH . 
R 4 HOH B 20 2020 2020 HOH HOH . 
R 4 HOH B 21 2021 2021 HOH HOH . 
R 4 HOH B 22 2022 2022 HOH HOH . 
R 4 HOH B 23 2023 2023 HOH HOH . 
R 4 HOH B 24 2024 2024 HOH HOH . 
R 4 HOH B 25 2025 2025 HOH HOH . 
R 4 HOH B 26 2026 2026 HOH HOH . 
R 4 HOH B 27 2027 2027 HOH HOH . 
R 4 HOH B 28 2028 2028 HOH HOH . 
R 4 HOH B 29 2029 2029 HOH HOH . 
R 4 HOH B 30 2030 2030 HOH HOH . 
R 4 HOH B 31 2031 2031 HOH HOH . 
R 4 HOH B 32 2032 2032 HOH HOH . 
R 4 HOH B 33 2033 2033 HOH HOH . 
R 4 HOH B 34 2034 2034 HOH HOH . 
R 4 HOH B 35 2035 2035 HOH HOH . 
R 4 HOH B 36 2036 2036 HOH HOH . 
R 4 HOH B 37 2037 2037 HOH HOH . 
R 4 HOH B 38 2038 2038 HOH HOH . 
R 4 HOH B 39 2039 2039 HOH HOH . 
R 4 HOH B 40 2040 2040 HOH HOH . 
R 4 HOH B 41 2041 2041 HOH HOH . 
R 4 HOH B 42 2042 2042 HOH HOH . 
R 4 HOH B 43 2043 2043 HOH HOH . 
R 4 HOH B 44 2044 2044 HOH HOH . 
R 4 HOH B 45 2045 2045 HOH HOH . 
R 4 HOH B 46 2046 2046 HOH HOH . 
R 4 HOH B 47 2047 2047 HOH HOH . 
R 4 HOH B 48 2048 2048 HOH HOH . 
R 4 HOH B 49 2049 2049 HOH HOH . 
R 4 HOH B 50 2050 2050 HOH HOH . 
R 4 HOH B 51 2051 2051 HOH HOH . 
R 4 HOH B 52 2052 2052 HOH HOH . 
R 4 HOH B 53 2053 2053 HOH HOH . 
R 4 HOH B 54 2054 2054 HOH HOH . 
R 4 HOH B 55 2055 2055 HOH HOH . 
R 4 HOH B 56 2056 2056 HOH HOH . 
R 4 HOH B 57 2057 2057 HOH HOH . 
R 4 HOH B 58 2058 2058 HOH HOH . 
R 4 HOH B 59 2059 2059 HOH HOH . 
R 4 HOH B 60 2060 2060 HOH HOH . 
R 4 HOH B 61 2061 2061 HOH HOH . 
R 4 HOH B 62 2062 2062 HOH HOH . 
R 4 HOH B 63 2063 2063 HOH HOH . 
R 4 HOH B 64 2064 2064 HOH HOH . 
R 4 HOH B 65 2065 2065 HOH HOH . 
R 4 HOH B 66 2066 2066 HOH HOH . 
R 4 HOH B 67 2067 2067 HOH HOH . 
R 4 HOH B 68 2068 2068 HOH HOH . 
R 4 HOH B 69 2069 2069 HOH HOH . 
R 4 HOH B 70 2070 2070 HOH HOH . 
R 4 HOH B 71 2071 2071 HOH HOH . 
R 4 HOH B 72 2072 2072 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SAM . . . C 2 -10.17 6.708 -26.49 1 21.91 ? N SAM 1546 A 1 
HETATM 2 C CA SAM . . . C 2 -9.364 5.655 -25.794 1 17.64 ? CA SAM 1546 A 1 
HETATM 3 C C SAM . . . C 2 -8.371 6.262 -24.816 1 17.9 ? C SAM 1546 A 1 
HETATM 4 O O SAM . . . C 2 -7.747 7.265 -25.149 1 22.66 ? O SAM 1546 A 1 
HETATM 5 O OXT SAM . . . C 2 -8.367 5.773 -23.612 1 22.21 ? OXT SAM 1546 A 1 
HETATM 6 C CB SAM . . . C 2 -8.605 4.775 -26.77 1 18.92 ? CB SAM 1546 A 1 
HETATM 7 C CG SAM . . . C 2 -8.168 3.392 -26.332 1 18.94 ? CG SAM 1546 A 1 
HETATM 8 S SD SAM . . . C 2 -7.028 3.3 -25.019 1 20.01 ? SD SAM 1546 A 1 
HETATM 9 C CE SAM . . . C 2 -6.192 1.908 -25.26 1 19.51 ? CE SAM 1546 A 1 
HETATM 10 C C5' SAM . . . C 2 -8.12 2.932 -23.706 1 20.34 ? C5' SAM 1546 A 1 
HETATM 11 C C4' SAM . . . C 2 -7.345 2.41 -22.48 1 20 ? C4' SAM 1546 A 1 
HETATM 12 O O4' SAM . . . C 2 -6.141 3.152 -22.292 1 20.59 ? O4' SAM 1546 A 1 
HETATM 13 C C3' SAM . . . C 2 -8.094 2.676 -21.166 1 18.81 ? C3' SAM 1546 A 1 
HETATM 14 O O3' SAM . . . C 2 -7.845 1.634 -20.216 1 21.86 ? O3' SAM 1546 A 1 
HETATM 15 C C2' SAM . . . C 2 -7.583 3.988 -20.737 1 18.56 ? C2' SAM 1546 A 1 
HETATM 16 O O2' SAM . . . C 2 -7.742 4.327 -19.34 1 20.09 ? O2' SAM 1546 A 1 
HETATM 17 C C1' SAM . . . C 2 -6.117 3.898 -21.074 1 18.23 ? C1' SAM 1546 A 1 
HETATM 18 N N9 SAM . . . C 2 -5.455 5.167 -21.182 1 19.96 ? N9 SAM 1546 A 1 
HETATM 19 C C8 SAM . . . C 2 -5.792 6.223 -21.941 1 18.49 ? C8 SAM 1546 A 1 
HETATM 20 N N7 SAM . . . C 2 -4.85 7.182 -21.829 1 19.17 ? N7 SAM 1546 A 1 
HETATM 21 C C5 SAM . . . C 2 -3.921 6.718 -20.964 1 19.16 ? C5 SAM 1546 A 1 
HETATM 22 C C6 SAM . . . C 2 -2.598 7.18 -20.523 1 20.7 ? C6 SAM 1546 A 1 
HETATM 23 N N6 SAM . . . C 2 -2.231 8.377 -20.867 1 20.34 ? N6 SAM 1546 A 1 
HETATM 24 N N1 SAM . . . C 2 -1.935 6.406 -19.598 1 19.17 ? N1 SAM 1546 A 1 
HETATM 25 C C2 SAM . . . C 2 -2.332 5.176 -19.259 1 20.11 ? C2 SAM 1546 A 1 
HETATM 26 N N3 SAM . . . C 2 -3.526 4.657 -19.694 1 19.97 ? N3 SAM 1546 A 1 
HETATM 27 C C4 SAM . . . C 2 -4.281 5.428 -20.557 1 17.71 ? C4 SAM 1546 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           27 
#