data_4UVR # _model_server_result.job_id lrifiLpk8tkIUboPu4RAKw _model_server_result.datetime_utc '2024-10-13 13:13:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uvr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1477}' # _entry.id 4UVR # _exptl.entry_id 4UVR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 611.108 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Nalpha-{4-[4-(5-chloro-2-methylphenyl)piperazin-1-yl]-2-fluorobenzoyl}-N-pyridin-4-yl-D-tryptophanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4UVR _cell.length_a 128.115 _cell.length_b 128.115 _cell.length_c 117.781 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UVR _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_554 -x+y,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -58.8905 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 402 A CYS 422 1_555 B FE HEM . A HEM 1450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc2 B FE HEM . A HEM 1450 1_555 C N5 J5Y . A J5Y 1477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? # _chem_comp.formula 'C34 H32 Cl F N6 O2' _chem_comp.formula_weight 611.108 _chem_comp.id J5Y _chem_comp.mon_nstd_flag . _chem_comp.name Nalpha-{4-[4-(5-chloro-2-methylphenyl)piperazin-1-yl]-2-fluorobenzoyl}-N-pyridin-4-yl-D-tryptophanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 J5Y sing 255 n n F C32 J5Y sing 256 n n N C6 J5Y sing 257 n n N C7 J5Y sing 258 n n N C10 J5Y sing 259 n n O C15 J5Y doub 260 n n CL C4 J5Y sing 261 n n C1 C2 J5Y doub 262 n y C1 C6 J5Y sing 263 n y N1 C8 J5Y sing 264 n n N1 C9 J5Y sing 265 n n N1 C11 J5Y sing 266 n n O1 C26 J5Y doub 267 n n C2 C3 J5Y sing 268 n y N2 C15 J5Y sing 269 n n N2 C16 J5Y sing 270 n n C3 C4 J5Y doub 271 n y N3 C19 J5Y sing 272 n y N3 C20 J5Y sing 273 n y C4 C5 J5Y sing 274 n y N4 C26 J5Y sing 275 n n N4 C27 J5Y sing 276 n n C5 C6 J5Y doub 277 n y N5 C29 J5Y doub 278 n y N5 C30 J5Y sing 279 n y C7 C8 J5Y sing 280 n n C9 C10 J5Y sing 281 n n C11 C12 J5Y doub 282 n y C11 C33 J5Y sing 283 n y C12 C13 J5Y sing 284 n y C13 C14 J5Y doub 285 n y C14 C15 J5Y sing 286 n n C14 C32 J5Y sing 287 n y C16 C17 J5Y sing 288 n n C16 C26 J5Y sing 289 n n C17 C18 J5Y sing 290 n n C18 C19 J5Y doub 291 n y C18 C25 J5Y sing 292 n y C20 C21 J5Y doub 293 n y C20 C25 J5Y sing 294 n y C21 C22 J5Y sing 295 n y C22 C23 J5Y doub 296 n y C23 C24 J5Y sing 297 n y C24 C25 J5Y doub 298 n y C27 C28 J5Y doub 299 n y C27 C31 J5Y sing 300 n y C28 C29 J5Y sing 301 n y C30 C31 J5Y doub 302 n y C32 C33 J5Y doub 303 n y C H J5Y sing 304 n n C HA J5Y sing 305 n n C HB J5Y sing 306 n n C2 H2 J5Y sing 307 n n N2 HN2 J5Y sing 308 n n C3 H3 J5Y sing 309 n n N3 HN3 J5Y sing 310 n n N4 HN4 J5Y sing 311 n n C5 H5 J5Y sing 312 n n C7 H7 J5Y sing 313 n n C7 H7A J5Y sing 314 n n C8 H8 J5Y sing 315 n n C8 H8A J5Y sing 316 n n C9 H9 J5Y sing 317 n n C9 H9A J5Y sing 318 n n C10 H10 J5Y sing 319 n n C10 H10A J5Y sing 320 n n C12 H12 J5Y sing 321 n n C13 H13 J5Y sing 322 n n C16 H16 J5Y sing 323 n n C17 H17 J5Y sing 324 n n C17 H17A J5Y sing 325 n n C19 H19 J5Y sing 326 n n C21 H21 J5Y sing 327 n n C22 H22 J5Y sing 328 n n C23 H23 J5Y sing 329 n n C24 H24 J5Y sing 330 n n C28 H28 J5Y sing 331 n n C29 H29 J5Y sing 332 n n C30 H30 J5Y sing 333 n n C31 H31 J5Y sing 334 n n C33 H33 J5Y sing 335 n n # _atom_sites.entry_id 4UVR _atom_sites.fract_transf_matrix[1][1] 0.007805 _atom_sites.fract_transf_matrix[1][2] 0.004507 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009013 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00849 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 1450 1450 HEM HEM . C 3 J5Y A 1 1477 1477 J5Y J5Y . D 4 SO4 A 1 1478 1478 SO4 SO4 . E 4 SO4 A 1 1479 1479 SO4 SO4 . F 4 SO4 A 1 1480 1480 SO4 SO4 . G 4 SO4 A 1 1481 1481 SO4 SO4 . H 5 HOH A 1 2001 2001 HOH HOH . H 5 HOH A 2 2002 2002 HOH HOH . H 5 HOH A 3 2003 2003 HOH HOH . H 5 HOH A 4 2004 2004 HOH HOH . H 5 HOH A 5 2005 2005 HOH HOH . H 5 HOH A 6 2006 2006 HOH HOH . H 5 HOH A 7 2007 2007 HOH HOH . H 5 HOH A 8 2008 2008 HOH HOH . H 5 HOH A 9 2009 2009 HOH HOH . H 5 HOH A 10 2010 2010 HOH HOH . H 5 HOH A 11 2011 2011 HOH HOH . H 5 HOH A 12 2012 2012 HOH HOH . H 5 HOH A 13 2013 2013 HOH HOH . H 5 HOH A 14 2014 2014 HOH HOH . H 5 HOH A 15 2015 2015 HOH HOH . H 5 HOH A 16 2016 2016 HOH HOH . H 5 HOH A 17 2017 2017 HOH HOH . H 5 HOH A 18 2018 2018 HOH HOH . H 5 HOH A 19 2019 2019 HOH HOH . H 5 HOH A 20 2020 2020 HOH HOH . H 5 HOH A 21 2021 2021 HOH HOH . H 5 HOH A 22 2022 2022 HOH HOH . H 5 HOH A 23 2023 2023 HOH HOH . H 5 HOH A 24 2024 2024 HOH HOH . H 5 HOH A 25 2025 2025 HOH HOH . H 5 HOH A 26 2026 2026 HOH HOH . H 5 HOH A 27 2027 2027 HOH HOH . H 5 HOH A 28 2028 2028 HOH HOH . H 5 HOH A 29 2029 2029 HOH HOH . H 5 HOH A 30 2030 2030 HOH HOH . H 5 HOH A 31 2031 2031 HOH HOH . H 5 HOH A 32 2032 2032 HOH HOH . H 5 HOH A 33 2033 2033 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C J5Y . . . C 3 -7.978 63.993 -0.819 1 31.87 ? C J5Y 1477 A 1 HETATM 2 F F J5Y . . . C 3 -5.561 56.766 -6.979 1 27.84 ? F J5Y 1477 A 1 HETATM 3 N N J5Y . . . C 3 -8.45 61.753 -2.882 1 33.71 ? N J5Y 1477 A 1 HETATM 4 O O J5Y . . . C 3 -3.87 54.17 -4.308 1 35.85 ? O J5Y 1477 A 1 HETATM 5 CL CL J5Y . . . C 3 -13.412 62.66 -3.215 1 51.3 ? CL J5Y 1477 A 1 HETATM 6 C C1 J5Y . . . C 3 -9.304 63.648 -1.418 1 34.64 ? C1 J5Y 1477 A 1 HETATM 7 N N1 J5Y . . . C 3 -6.69 59.768 -3.556 1 37.24 ? N1 J5Y 1477 A 1 HETATM 8 O O1 J5Y . . . C 3 -4.057 50.667 -5.659 1 33.01 ? O1 J5Y 1477 A 1 HETATM 9 C C2 J5Y . . . C 3 -10.412 64.363 -1.019 1 36.09 ? C2 J5Y 1477 A 1 HETATM 10 N N2 J5Y . . . C 3 -4.915 54.038 -6.204 1 32.8 ? N2 J5Y 1477 A 1 HETATM 11 C C3 J5Y . . . C 3 -11.662 64.064 -1.551 1 37.28 ? C3 J5Y 1477 A 1 HETATM 12 N N3 J5Y . . . C 3 -7.527 53.101 -9.275 1 40.45 ? N3 J5Y 1477 A 1 HETATM 13 C C4 J5Y . . . C 3 -11.812 63.065 -2.495 1 39.1 ? C4 J5Y 1477 A 1 HETATM 14 N N4 J5Y . . . C 3 -6.126 51.58 -5.782 1 34.39 ? N4 J5Y 1477 A 1 HETATM 15 C C5 J5Y . . . C 3 -10.737 62.326 -2.937 1 37.24 ? C5 J5Y 1477 A 1 HETATM 16 N N5 J5Y . . . C 3 -8.376 48.172 -5.071 1 31.08 ? N5 J5Y 1477 A 1 HETATM 17 C C6 J5Y . . . C 3 -9.478 62.584 -2.451 1 36.76 ? C6 J5Y 1477 A 1 HETATM 18 C C7 J5Y . . . C 3 -8.349 61.3 -4.245 1 34.92 ? C7 J5Y 1477 A 1 HETATM 19 C C8 J5Y . . . C 3 -6.92 60.847 -4.503 1 35.32 ? C8 J5Y 1477 A 1 HETATM 20 C C9 J5Y . . . C 3 -7.003 59.94 -2.143 1 36.68 ? C9 J5Y 1477 A 1 HETATM 21 C C10 J5Y . . . C 3 -7.538 61.301 -1.857 1 34.72 ? C10 J5Y 1477 A 1 HETATM 22 C C11 J5Y . . . C 3 -6.201 58.516 -3.952 1 34.38 ? C11 J5Y 1477 A 1 HETATM 23 C C12 J5Y . . . C 3 -5.851 57.567 -2.987 1 33.04 ? C12 J5Y 1477 A 1 HETATM 24 C C13 J5Y . . . C 3 -5.367 56.314 -3.369 1 36.14 ? C13 J5Y 1477 A 1 HETATM 25 C C14 J5Y . . . C 3 -5.275 55.942 -4.706 1 34.03 ? C14 J5Y 1477 A 1 HETATM 26 C C15 J5Y . . . C 3 -4.695 54.621 -5.064 1 32.7 ? C15 J5Y 1477 A 1 HETATM 27 C C16 J5Y . . . C 3 -4.162 52.865 -6.589 1 36.11 ? C16 J5Y 1477 A 1 HETATM 28 C C17 J5Y . . . C 3 -4.027 52.821 -8.126 1 37.46 ? C17 J5Y 1477 A 1 HETATM 29 C C18 J5Y . . . C 3 -5.413 52.646 -8.659 1 38.57 ? C18 J5Y 1477 A 1 HETATM 30 C C19 J5Y . . . C 3 -6.35 53.643 -8.842 1 38.31 ? C19 J5Y 1477 A 1 HETATM 31 C C20 J5Y . . . C 3 -7.461 51.775 -9.394 1 42.01 ? C20 J5Y 1477 A 1 HETATM 32 C C21 J5Y . . . C 3 -8.365 50.789 -9.783 1 47.78 ? C21 J5Y 1477 A 1 HETATM 33 C C22 J5Y . . . C 3 -7.954 49.454 -9.799 1 44.59 ? C22 J5Y 1477 A 1 HETATM 34 C C23 J5Y . . . C 3 -6.664 49.11 -9.417 1 43.52 ? C23 J5Y 1477 A 1 HETATM 35 C C24 J5Y . . . C 3 -5.731 50.073 -9.003 1 43.65 ? C24 J5Y 1477 A 1 HETATM 36 C C25 J5Y . . . C 3 -6.103 51.391 -9.005 1 40.62 ? C25 J5Y 1477 A 1 HETATM 37 C C26 J5Y . . . C 3 -4.784 51.602 -5.96 1 37.57 ? C26 J5Y 1477 A 1 HETATM 38 C C27 J5Y . . . C 3 -6.81 50.466 -5.458 1 33.45 ? C27 J5Y 1477 A 1 HETATM 39 C C28 J5Y . . . C 3 -6.278 49.314 -4.873 1 34.23 ? C28 J5Y 1477 A 1 HETATM 40 C C29 J5Y . . . C 3 -7.099 48.186 -4.693 1 33.85 ? C29 J5Y 1477 A 1 HETATM 41 C C30 J5Y . . . C 3 -8.881 49.272 -5.635 1 32.25 ? C30 J5Y 1477 A 1 HETATM 42 C C31 J5Y . . . C 3 -8.13 50.41 -5.847 1 32.8 ? C31 J5Y 1477 A 1 HETATM 43 C C32 J5Y . . . C 3 -5.648 56.971 -5.706 1 31.93 ? C32 J5Y 1477 A 1 HETATM 44 C C33 J5Y . . . C 3 -6.095 58.201 -5.306 1 33.27 ? C33 J5Y 1477 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 44 #