data_4UW1 # _model_server_result.job_id R9OmOq-KCvLnTuPTZutQOg _model_server_result.datetime_utc '2024-11-21 17:14:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uw1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":2314}' # _entry.id 4UW1 # _exptl.entry_id 4UW1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 71.38 _cell.angle_beta 67.31 _cell.angle_gamma 89.51 _cell.entry_id 4UW1 _cell.length_a 80.589 _cell.length_b 82.312 _cell.length_c 86.727 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UW1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 PISA monomeric 1 author_and_software_defined_assembly 7 PISA monomeric 1 author_and_software_defined_assembly 8 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,I,J,K,L 1 1 B,M,N 2 1 C,O,P,Q,R 3 1 D,S,T,U 4 1 E,V,W 5 1 F,X,Y 6 1 G,Z,AA,BA 7 1 H,CA,DA 8 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 P N N ? 3 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 167 A CYS 1234 1_555 I ZN ZN . A ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc2 A ND1 HIS 170 A HIS 1237 1_555 I ZN ZN . A ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc3 A SG CYS 175 A CYS 1242 1_555 I ZN ZN . A ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc4 A SG CYS 178 A CYS 1245 1_555 I ZN ZN . A ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc5 B SG CYS 167 B CYS 1234 1_555 M ZN ZN . B ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc6 B ND1 HIS 170 B HIS 1237 1_555 M ZN ZN . B ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc7 B SG CYS 175 B CYS 1242 1_555 M ZN ZN . B ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc8 B SG CYS 178 B CYS 1245 1_555 M ZN ZN . B ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc9 C SG CYS 167 C CYS 1234 1_555 O ZN ZN . C ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? metalc ? metalc10 C ND1 HIS 170 C HIS 1237 1_555 O ZN ZN . C ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc11 C SG CYS 175 C CYS 1242 1_555 O ZN ZN . C ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc12 C SG CYS 178 C CYS 1245 1_555 O ZN ZN . C ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc13 D SG CYS 167 D CYS 1234 1_555 S ZN ZN . D ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc14 D ND1 HIS 170 D HIS 1237 1_555 S ZN ZN . D ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc15 D SG CYS 175 D CYS 1242 1_555 S ZN ZN . D ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc16 D SG CYS 178 D CYS 1245 1_555 S ZN ZN . D ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc17 E SG CYS 167 E CYS 1234 1_555 V ZN ZN . E ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc18 E ND1 HIS 170 E HIS 1237 1_555 V ZN ZN . E ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc19 E SG CYS 175 E CYS 1242 1_555 V ZN ZN . E ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc20 E SG CYS 178 E CYS 1245 1_555 V ZN ZN . E ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc21 F SG CYS 167 F CYS 1234 1_555 X ZN ZN . F ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc22 F ND1 HIS 170 F HIS 1237 1_555 X ZN ZN . F ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc23 F SG CYS 175 F CYS 1242 1_555 X ZN ZN . F ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc24 F SG CYS 178 F CYS 1245 1_555 X ZN ZN . F ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc25 G SG CYS 167 G CYS 1234 1_555 Z ZN ZN . G ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc26 G ND1 HIS 170 G HIS 1237 1_555 Z ZN ZN . G ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc27 G SG CYS 175 G CYS 1242 1_555 Z ZN ZN . G ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc28 G SG CYS 178 G CYS 1245 1_555 Z ZN ZN . G ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc29 H SG CYS 167 H CYS 1234 1_555 CA ZN ZN . H ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc30 H ND1 HIS 170 H HIS 1237 1_555 CA ZN ZN . H ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc31 H SG CYS 175 H CYS 1242 1_555 CA ZN ZN . H ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc32 H SG CYS 178 H CYS 1245 1_555 CA ZN ZN . H ZN 2000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 183 n n C1 C2 GOL sing 184 n n C1 H11 GOL sing 185 n n C1 H12 GOL sing 186 n n O1 HO1 GOL sing 187 n n C2 O2 GOL sing 188 n n C2 C3 GOL sing 189 n n C2 H2 GOL sing 190 n n O2 HO2 GOL sing 191 n n C3 O3 GOL sing 192 n n C3 H31 GOL sing 193 n n C3 H32 GOL sing 194 n n O3 HO3 GOL sing 195 n n # _atom_sites.entry_id 4UW1 _atom_sites.fract_transf_matrix[1][1] 0.012409 _atom_sites.fract_transf_matrix[1][2] -0.000106 _atom_sites.fract_transf_matrix[1][3] -0.005483 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012149 _atom_sites.fract_transf_matrix[2][3] -0.004429 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013302 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 ZN A 1 2000 2000 ZN ZN . J 3 GOL A 1 2314 2314 GOL GOL . K 4 EDO A 1 2315 2315 EDO EDO . L 5 92R A 1 3000 3000 92R 92R . M 2 ZN B 1 2000 2000 ZN ZN . N 5 92R B 1 3000 3000 92R 92R . O 2 ZN C 1 2000 2000 ZN ZN . P 3 GOL C 1 2315 2315 GOL GOL . Q 4 EDO C 1 2316 2316 EDO EDO . R 5 92R C 1 3000 3000 92R 92R . S 2 ZN D 1 2000 2000 ZN ZN . T 3 GOL D 1 2316 2316 GOL GOL . U 5 92R D 1 3000 3000 92R 92R . V 2 ZN E 1 2000 2000 ZN ZN . W 5 92R E 1 3000 3000 92R 92R . X 2 ZN F 1 2000 2000 ZN ZN . Y 5 92R F 1 3000 3000 92R 92R . Z 2 ZN G 1 2000 2000 ZN ZN . AA 4 EDO G 1 2314 2314 EDO EDO . BA 5 92R G 1 3000 3000 92R 92R . CA 2 ZN H 1 2000 2000 ZN ZN . DA 5 92R H 1 3000 3000 92R 92R . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . J 3 26.487 -15.27 -18.002 1 33.67 ? C1 GOL 2314 A 1 HETATM 2 O O1 GOL . . . J 3 26.815 -16.599 -17.666 1 33.2 ? O1 GOL 2314 A 1 HETATM 3 C C2 GOL . . . J 3 25.114 -14.923 -17.438 1 34.18 ? C2 GOL 2314 A 1 HETATM 4 O O2 GOL . . . J 3 24.522 -13.91 -18.22 1 33.88 ? O2 GOL 2314 A 1 HETATM 5 C C3 GOL . . . J 3 25.253 -14.449 -15.996 1 34.64 ? C3 GOL 2314 A 1 HETATM 6 O O3 GOL . . . J 3 24.361 -13.382 -15.76 1 34.53 ? O3 GOL 2314 A 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #