data_4UWK # _model_server_result.job_id 2UX5d7eYw4SqKh6mp-RT6A _model_server_result.datetime_utc '2024-12-02 02:31:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uwk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1872}' # _entry.id 4UWK # _exptl.entry_id 4UWK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 462.917 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-1-[(5-chloro-2-thienyl)methyl]-8-[(3R,5R)-3,5-dimethylmorpholin-4-yl]-2-(trifluoromethyl)-3,4-dihydro-2H-pyrimido[1,2-a]pyrimidin-6-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4UWK _cell.length_a 92.03 _cell.length_b 146.93 _cell.length_c 61.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UWK _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H22 Cl F3 N4 O2 S' _chem_comp.formula_weight 462.917 _chem_comp.id UJB _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-1-[(5-chloro-2-thienyl)methyl]-8-[(3R,5R)-3,5-dimethylmorpholin-4-yl]-2-(trifluoromethyl)-3,4-dihydro-2H-pyrimido[1,2-a]pyrimidin-6-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N4 UJB sing 375 n n C1 C11 UJB sing 376 n n C1 C18 UJB sing 377 n n C2 N3 UJB sing 378 n n C2 N4 UJB sing 379 n n C2 N5 UJB doub 380 n n N3 C6 UJB sing 381 n n N3 C7 UJB sing 382 n n N4 C28 UJB sing 383 n n N5 C8 UJB sing 384 n n C6 C9 UJB sing 385 n n C6 O10 UJB doub 386 n n C7 C11 UJB sing 387 n n C8 C9 UJB doub 388 n n C8 N17 UJB sing 389 n n C12 C13 UJB sing 390 n n C12 N17 UJB sing 391 n n C12 C29 UJB sing 392 n n C13 O14 UJB sing 393 n n O14 C15 UJB sing 394 n n C15 C16 UJB sing 395 n n C16 N17 UJB sing 396 n n C16 C30 UJB sing 397 n n C18 F19 UJB sing 398 n n C18 F20 UJB sing 399 n n C18 F21 UJB sing 400 n n S22 C23 UJB sing 401 n y S22 C26 UJB sing 402 n y C23 C24 UJB doub 403 n y C23 C28 UJB sing 404 n n C24 C25 UJB sing 405 n y C25 C26 UJB doub 406 n y C26 CL UJB sing 407 n n C1 H1 UJB sing 408 n n C11 H111 UJB sing 409 n n C11 H112 UJB sing 410 n n C7 H71C UJB sing 411 n n C7 H72C UJB sing 412 n n C28 H281 UJB sing 413 n n C28 H282 UJB sing 414 n n C9 H9 UJB sing 415 n n C12 H12 UJB sing 416 n n C13 H131 UJB sing 417 n n C13 H132 UJB sing 418 n n C29 H291 UJB sing 419 n n C29 H292 UJB sing 420 n n C29 H293 UJB sing 421 n n C15 H151 UJB sing 422 n n C15 H152 UJB sing 423 n n C16 H16 UJB sing 424 n n C30 H301 UJB sing 425 n n C30 H302 UJB sing 426 n n C30 H303 UJB sing 427 n n C24 H24 UJB sing 428 n n C25 H25 UJB sing 429 n n # _atom_sites.entry_id 4UWK _atom_sites.fract_transf_matrix[1][1] 0.010866 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006806 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016226 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 1870 1870 SO4 SO4 . C 3 GOL A 1 1871 1871 GOL GOL . D 4 UJB A 1 1872 1872 UJB UJB . E 5 HOH A 1 2001 2001 HOH HOH . E 5 HOH A 2 2002 2002 HOH HOH . E 5 HOH A 3 2003 2003 HOH HOH . E 5 HOH A 4 2004 2004 HOH HOH . E 5 HOH A 5 2005 2005 HOH HOH . E 5 HOH A 6 2006 2006 HOH HOH . E 5 HOH A 7 2007 2007 HOH HOH . E 5 HOH A 8 2008 2008 HOH HOH . E 5 HOH A 9 2009 2009 HOH HOH . E 5 HOH A 10 2010 2010 HOH HOH . E 5 HOH A 11 2011 2011 HOH HOH . E 5 HOH A 12 2012 2012 HOH HOH . E 5 HOH A 13 2013 2013 HOH HOH . E 5 HOH A 14 2014 2014 HOH HOH . E 5 HOH A 15 2015 2015 HOH HOH . E 5 HOH A 16 2016 2016 HOH HOH . E 5 HOH A 17 2017 2017 HOH HOH . E 5 HOH A 18 2018 2018 HOH HOH . E 5 HOH A 19 2019 2019 HOH HOH . E 5 HOH A 20 2020 2020 HOH HOH . E 5 HOH A 21 2021 2021 HOH HOH . E 5 HOH A 22 2022 2022 HOH HOH . E 5 HOH A 23 2023 2023 HOH HOH . E 5 HOH A 24 2024 2024 HOH HOH . E 5 HOH A 25 2025 2025 HOH HOH . E 5 HOH A 26 2026 2026 HOH HOH . E 5 HOH A 27 2027 2027 HOH HOH . E 5 HOH A 28 2028 2028 HOH HOH . E 5 HOH A 29 2029 2029 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 UJB . . . D 4 20.673 -18.338 -25.476 1 50.83 ? C1 UJB 1872 A 1 HETATM 2 C C2 UJB . . . D 4 18.802 -17.055 -24.442 1 48.57 ? C2 UJB 1872 A 1 HETATM 3 N N3 UJB . . . D 4 18.045 -18.213 -24.392 1 46.08 ? N3 UJB 1872 A 1 HETATM 4 N N4 UJB . . . D 4 20.222 -17.136 -24.756 1 53.22 ? N4 UJB 1872 A 1 HETATM 5 N N5 UJB . . . D 4 18.281 -15.837 -24.15 1 45.75 ? N5 UJB 1872 A 1 HETATM 6 C C6 UJB . . . D 4 16.65 -18.122 -24.068 1 44.03 ? C6 UJB 1872 A 1 HETATM 7 C C7 UJB . . . D 4 18.576 -19.555 -24.755 1 49.18 ? C7 UJB 1872 A 1 HETATM 8 C C8 UJB . . . D 4 16.936 -15.682 -23.689 1 40.29 ? C8 UJB 1872 A 1 HETATM 9 C C9 UJB . . . D 4 16.129 -16.823 -23.697 1 39.36 ? C9 UJB 1872 A 1 HETATM 10 O O10 UJB . . . D 4 16.033 -19.172 -24.122 1 48.07 ? O10 UJB 1872 A 1 HETATM 11 C C11 UJB . . . D 4 20.101 -19.629 -24.865 1 50.49 ? C11 UJB 1872 A 1 HETATM 12 C C12 UJB . . . D 4 15.087 -14.059 -23.648 1 31.33 ? C12 UJB 1872 A 1 HETATM 13 C C13 UJB . . . D 4 14.677 -12.903 -22.771 1 31.15 ? C13 UJB 1872 A 1 HETATM 14 O O14 UJB . . . D 4 15.555 -11.783 -22.919 1 33.78 ? O14 UJB 1872 A 1 HETATM 15 C C15 UJB . . . D 4 16.897 -12.077 -22.494 1 33.61 ? C15 UJB 1872 A 1 HETATM 16 C C16 UJB . . . D 4 17.478 -13.401 -22.979 1 34.67 ? C16 UJB 1872 A 1 HETATM 17 N N17 UJB . . . D 4 16.51 -14.457 -23.418 1 37.81 ? N17 UJB 1872 A 1 HETATM 18 C C18 UJB . . . D 4 20.451 -18.2 -26.97 1 50.66 ? C18 UJB 1872 A 1 HETATM 19 F F19 UJB . . . D 4 19.236 -17.765 -27.281 1 51.8 ? F19 UJB 1872 A 1 HETATM 20 F F20 UJB . . . D 4 20.621 -19.354 -27.608 1 49.36 ? F20 UJB 1872 A 1 HETATM 21 F F21 UJB . . . D 4 21.306 -17.337 -27.503 1 52.3 ? F21 UJB 1872 A 1 HETATM 22 S S22 UJB . . . D 4 22.145 -15.198 -21.822 1 72.67 ? S22 UJB 1872 A 1 HETATM 23 C C23 UJB . . . D 4 21.461 -15.651 -23.279 1 68 ? C23 UJB 1872 A 1 HETATM 24 C C24 UJB . . . D 4 21.341 -14.652 -24.183 1 71.52 ? C24 UJB 1872 A 1 HETATM 25 C C25 UJB . . . D 4 21.815 -13.425 -23.677 1 75.92 ? C25 UJB 1872 A 1 HETATM 26 C C26 UJB . . . D 4 22.295 -13.57 -22.421 1 79.26 ? C26 UJB 1872 A 1 HETATM 27 CL CL UJB . . . D 4 22.949 -12.277 -21.571 1 86.73 ? CL UJB 1872 A 1 HETATM 28 C C28 UJB . . . D 4 21.036 -16.991 -23.506 1 61.94 ? C28 UJB 1872 A 1 HETATM 29 C C29 UJB . . . D 4 14.764 -13.819 -25.117 1 22.72 ? C29 UJB 1872 A 1 HETATM 30 C C30 UJB . . . D 4 18.445 -13.868 -21.906 1 34.41 ? C30 UJB 1872 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 4 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 30 #