data_4UXN # _model_server_result.job_id '_O7eS5Pj4F0g8nkK5ZWZhg' _model_server_result.datetime_utc '2024-11-25 08:23:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uxn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":901}' # _entry.id 4UXN # _exptl.entry_id 4UXN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 380.437 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'benzyl (2R)-2-{[4-(3-oxopropyl)phenyl]carbamoyl}pyrrolidine-1-carboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4UXN _cell.length_a 118.98 _cell.length_b 177.76 _cell.length_c 233.72 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UXN _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id N5 _struct_conn.ptnr1_label_comp_id FAD _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id FAD _struct_conn.ptnr1_auth_seq_id 900 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id D _struct_conn.ptnr2_label_atom_id CAD _struct_conn.ptnr2_label_comp_id M8A _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id M8A _struct_conn.ptnr2_auth_seq_id 901 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.444 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C22 H24 N2 O4' _chem_comp.formula_weight 380.437 _chem_comp.id M8A _chem_comp.mon_nstd_flag . _chem_comp.name 'benzyl (2R)-2-{[4-(3-oxopropyl)phenyl]carbamoyl}pyrrolidine-1-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAA CAD M8A doub 307 n n CAD CAN M8A sing 308 n n CAN CAP M8A sing 309 n n CAP CAX M8A sing 310 n n CAX CAK M8A sing 311 n y CAX CAJ M8A doub 312 n y CAK CAM M8A doub 313 n y CAM CAZ M8A sing 314 n y CAJ CAL M8A sing 315 n y CAL CAZ M8A doub 316 n y CAZ NAT M8A sing 317 n n NAT C M8A sing 318 n n C O M8A doub 319 n n C CA M8A sing 320 n n CA CB M8A sing 321 n n CA N M8A sing 322 n n CB CG M8A sing 323 n n CG CD M8A sing 324 n n CD N M8A sing 325 n n N CAW M8A sing 326 n n CAW OAC M8A doub 327 n n CAW OAU M8A sing 328 n n OAU CAS M8A sing 329 n n CAS CAY M8A sing 330 n n CAY CAH M8A sing 331 n y CAY CAI M8A doub 332 n y CAH CAF M8A doub 333 n y CAF CAE M8A sing 334 n y CAE CAG M8A doub 335 n y CAG CAI M8A sing 336 n y CAN HAN1 M8A sing 337 n n CAN HAN2 M8A sing 338 n n CAD HAD M8A sing 339 n n CAP HAP1 M8A sing 340 n n CAP HAP2 M8A sing 341 n n CAK HAK M8A sing 342 n n CAJ HAJ M8A sing 343 n n CAM HAM M8A sing 344 n n CAL HAL M8A sing 345 n n NAT HAT M8A sing 346 n n CA HA M8A sing 347 n n CB HB1C M8A sing 348 n n CB HB2C M8A sing 349 n n CG HG1C M8A sing 350 n n CG HG2C M8A sing 351 n n CD HD1C M8A sing 352 n n CD HD2C M8A sing 353 n n CAS HAS1 M8A sing 354 n n CAS HAS2 M8A sing 355 n n CAH HAH M8A sing 356 n n CAI HAI M8A sing 357 n n CAF HAF M8A sing 358 n n CAE HAE M8A sing 359 n n CAG HAG M8A sing 360 n n # _atom_sites.entry_id 4UXN _atom_sites.fract_transf_matrix[1][1] 0.008405 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005626 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004279 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FAD A 1 900 900 FAD FAD . D 4 M8A A 1 901 901 M8A M8A . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAA M8A . . . D 4 -8.432 56.183 79.385 1 47.82 ? OAA M8A 901 A 1 HETATM 2 C CAD M8A . . . D 4 -7.843 56.677 80.741 1 89.02 ? CAD M8A 901 A 1 HETATM 3 C CAN M8A . . . D 4 -6.466 56.08 81.3 1 85.51 ? CAN M8A 901 A 1 HETATM 4 C CAP M8A . . . D 4 -6.333 56.259 82.794 1 85.75 ? CAP M8A 901 A 1 HETATM 5 C CAX M8A . . . D 4 -6.015 55.098 83.409 1 88.89 ? CAX M8A 901 A 1 HETATM 6 C CAK M8A . . . D 4 -4.698 54.665 83.411 1 101.26 ? CAK M8A 901 A 1 HETATM 7 C CAM M8A . . . D 4 -4.356 53.467 84.072 1 118.86 ? CAM M8A 901 A 1 HETATM 8 C CAJ M8A . . . D 4 -6.974 54.376 84.083 1 94.17 ? CAJ M8A 901 A 1 HETATM 9 C CAL M8A . . . D 4 -6.616 53.207 84.772 1 118.39 ? CAL M8A 901 A 1 HETATM 10 C CAZ M8A . . . D 4 -5.321 52.699 84.764 1 140.8 ? CAZ M8A 901 A 1 HETATM 11 N NAT M8A . . . D 4 -5.063 51.547 85.395 1 180.31 ? NAT M8A 901 A 1 HETATM 12 C C M8A . . . D 4 -4.08 51.538 86.308 1 177.24 ? C M8A 901 A 1 HETATM 13 O O M8A . . . D 4 -3.344 52.495 86.552 1 196.17 ? O M8A 901 A 1 HETATM 14 C CA M8A . . . D 4 -3.748 50.328 86.857 1 170.36 ? CA M8A 901 A 1 HETATM 15 C CB M8A . . . D 4 -3.5 50.477 88.399 1 173.48 ? CB M8A 901 A 1 HETATM 16 C CG M8A . . . D 4 -3.645 49.089 88.859 1 160.11 ? CG M8A 901 A 1 HETATM 17 C CD M8A . . . D 4 -4.481 48.415 87.822 1 155.56 ? CD M8A 901 A 1 HETATM 18 N N M8A . . . D 4 -4.677 49.253 86.683 1 150.43 ? N M8A 901 A 1 HETATM 19 C CAW M8A . . . D 4 -5.413 48.803 85.659 1 140.8 ? CAW M8A 901 A 1 HETATM 20 O OAC M8A . . . D 4 -6.054 47.779 85.761 1 147.49 ? OAC M8A 901 A 1 HETATM 21 O OAU M8A . . . D 4 -5.702 49.556 84.581 1 147.32 ? OAU M8A 901 A 1 HETATM 22 C CAS M8A . . . D 4 -5.088 49.338 83.32 1 94.17 ? CAS M8A 901 A 1 HETATM 23 C CAY M8A . . . D 4 -5.936 50.074 82.407 1 99.43 ? CAY M8A 901 A 1 HETATM 24 C CAH M8A . . . D 4 -5.489 51.13 81.574 1 99.07 ? CAH M8A 901 A 1 HETATM 25 C CAF M8A . . . D 4 -6.364 51.876 80.763 1 100.09 ? CAF M8A 901 A 1 HETATM 26 C CAE M8A . . . D 4 -7.723 51.578 80.72 1 102.21 ? CAE M8A 901 A 1 HETATM 27 C CAG M8A . . . D 4 -8.218 50.531 81.496 1 117.43 ? CAG M8A 901 A 1 HETATM 28 C CAI M8A . . . D 4 -7.321 49.798 82.337 1 117.94 ? CAI M8A 901 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #