data_4UXW # _model_server_result.job_id l1I5Z7Ce8-Evoq5We_DGvg _model_server_result.datetime_utc '2024-11-08 16:51:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uxw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1122}' # _entry.id 4UXW # _exptl.entry_id 4UXW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-2-METHYL-2,4-PENTANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4UXW _cell.length_a 72.8 _cell.length_b 72.8 _cell.length_c 199.32 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UXW _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C OE2 GLU 85 C GLU 76 1_555 J NA NA . C NA 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc2 C OE1 GLU 85 C GLU 76 1_555 J NA NA . C NA 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc3 I O1 NO3 . C NO3 1121 1_555 J NA NA . C NA 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.028 ? metalc ? metalc4 I N NO3 . C NO3 1121 1_555 J NA NA . C NA 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? metalc ? metalc5 I O3 NO3 . C NO3 1121 1_555 J NA NA . C NA 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MPD _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-2-METHYL-2,4-PENTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MPD sing 235 n n C1 H11 MPD sing 236 n n C1 H12 MPD sing 237 n n C1 H13 MPD sing 238 n n C2 O2 MPD sing 239 n n C2 CM MPD sing 240 n n C2 C3 MPD sing 241 n n O2 HO2 MPD sing 242 n n CM HM1 MPD sing 243 n n CM HM2 MPD sing 244 n n CM HM3 MPD sing 245 n n C3 C4 MPD sing 246 n n C3 H31 MPD sing 247 n n C3 H32 MPD sing 248 n n C4 O4 MPD sing 249 n n C4 C5 MPD sing 250 n n C4 H4 MPD sing 251 n n O4 HO4 MPD sing 252 n n C5 H51 MPD sing 253 n n C5 H52 MPD sing 254 n n C5 H53 MPD sing 255 n n # _atom_sites.entry_id 4UXW _atom_sites.fract_transf_matrix[1][1] 0.013736 _atom_sites.fract_transf_matrix[1][2] 0.007931 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015861 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005017 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 OLC A 1 1121 1121 OLC OLC . E 2 OLC A 1 1122 1122 OLC OLC . F 3 MPD B 1 1122 1122 MPD MPD . G 2 OLC B 1 1123 1123 OLC OLC . H 2 OLC B 1 1124 1124 OLC OLC . I 4 NO3 C 1 1121 1121 NO3 NO3 . J 5 NA C 1 1122 1122 NA NA . K 2 OLC C 1 1123 1123 OLC OLC . L 2 OLC C 1 1124 1124 OLC OLC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MPD . . . F 3 -47.143 16.402 -28.106 1 164.59 ? C1 MPD 1122 B 1 HETATM 2 C C2 MPD . . . F 3 -47.821 15.403 -27.175 1 164.59 ? C2 MPD 1122 B 1 HETATM 3 O O2 MPD . . . F 3 -49.241 15.696 -27.192 1 164.59 ? O2 MPD 1122 B 1 HETATM 4 C CM MPD . . . F 3 -47.293 15.572 -25.75 1 164.59 ? CM MPD 1122 B 1 HETATM 5 C C3 MPD . . . F 3 -47.589 13.972 -27.67 1 164.59 ? C3 MPD 1122 B 1 HETATM 6 C C4 MPD . . . F 3 -48.601 12.98 -27.099 1 164.59 ? C4 MPD 1122 B 1 HETATM 7 O O4 MPD . . . F 3 -49.558 12.628 -28.077 1 164.59 ? O4 MPD 1122 B 1 HETATM 8 C C5 MPD . . . F 3 -47.921 11.714 -26.588 1 164.59 ? C5 MPD 1122 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #