data_4UXX # _model_server_result.job_id Cnj94iSAl0C0UOeP2efayg _model_server_result.datetime_utc '2024-11-25 12:50:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uxx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1124}' # _entry.id 4UXX # _exptl.entry_id 4UXX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4UXX _cell.length_a 72.94 _cell.length_b 72.94 _cell.length_c 195.76 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UXX _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N ? 5 K N N ? 5 L N N ? 5 R N N ? 5 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 37 A GLU 28 1_555 E NA NA . A NA 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc2 A OE2 GLU 37 A GLU 28 1_555 E NA NA . A NA 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc3 A OE1 GLU 85 A GLU 76 1_555 E NA NA . A NA 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc4 E NA NA . A NA 1122 1_555 F O ACT . A ACT 1123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.837 ? metalc ? metalc5 E NA NA . A NA 1122 1_555 F OXT ACT . A ACT 1123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc6 B OE1 GLU 37 B GLU 28 1_555 N NA NA . B NA 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc7 B OE2 GLU 85 B GLU 76 1_555 N NA NA . B NA 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc8 B OE1 GLU 85 B GLU 76 1_555 N NA NA . B NA 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc9 M OXT ACT . B ACT 1125 1_555 N NA NA . B NA 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc10 M O ACT . B ACT 1125 1_555 N NA NA . B NA 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc11 C OE2 GLU 37 C GLU 28 1_555 O ZN ZN . C ZN 1121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc12 C OE1 GLU 85 C GLU 76 1_555 O ZN ZN . C ZN 1121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc13 C OE2 GLU 85 C GLU 76 1_555 P ZN ZN . C ZN 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc14 C OE1 GLU 97 C GLU 88 4_645 T NA NA . C NA 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc15 C OE1 GLU 97 C GLU 88 1_555 T NA NA . C NA 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc16 O ZN ZN . C ZN 1121 1_555 Q O1B ACP . C ACP 1123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc17 O ZN ZN . C ZN 1121 1_555 Q O3G ACP . C ACP 1123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc18 P ZN ZN . C ZN 1122 1_555 Q O1A ACP . C ACP 1123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc19 P ZN ZN . C ZN 1122 1_555 Q O1G ACP . C ACP 1123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 315 n n C10 C9 OLC doub 316 n n C10 C11 OLC sing 317 n n C9 C8 OLC sing 318 n n C17 C16 OLC sing 319 z n C11 C12 OLC sing 320 n n C8 C7 OLC sing 321 n n C24 C22 OLC sing 322 n n C24 O25 OLC sing 323 n n C16 C15 OLC sing 324 n n C12 C13 OLC sing 325 n n C7 C6 OLC sing 326 n n C15 C14 OLC sing 327 n n C13 C14 OLC sing 328 n n C6 C5 OLC sing 329 n n C5 C4 OLC sing 330 n n C4 C3 OLC sing 331 n n C3 C2 OLC sing 332 n n C2 C1 OLC sing 333 n n C21 C22 OLC sing 334 n n C21 O20 OLC sing 335 n n C1 O19 OLC doub 336 n n C1 O20 OLC sing 337 n n C22 O23 OLC sing 338 n n C18 H18 OLC sing 339 n n C18 H18A OLC sing 340 n n C18 H18B OLC sing 341 n n C10 H10 OLC sing 342 n n C9 H9 OLC sing 343 n n C17 H17 OLC sing 344 n n C17 H17A OLC sing 345 n n C11 H11 OLC sing 346 n n C11 H11A OLC sing 347 n n C8 H8 OLC sing 348 n n C8 H8A OLC sing 349 n n C24 H24 OLC sing 350 n n C24 H24A OLC sing 351 n n C16 H16 OLC sing 352 n n C16 H16A OLC sing 353 n n C12 H12 OLC sing 354 n n C12 H12A OLC sing 355 n n C7 H7 OLC sing 356 n n C7 H7A OLC sing 357 n n C15 H15 OLC sing 358 n n C15 H15A OLC sing 359 n n C13 H13 OLC sing 360 n n C13 H13A OLC sing 361 n n C6 H6 OLC sing 362 n n C6 H6A OLC sing 363 n n C14 H14 OLC sing 364 n n C14 H14A OLC sing 365 n n C5 H5 OLC sing 366 n n C5 H5A OLC sing 367 n n C4 H4 OLC sing 368 n n C4 H4A OLC sing 369 n n C3 H3 OLC sing 370 n n C3 H3A OLC sing 371 n n C2 H2 OLC sing 372 n n C2 H2A OLC sing 373 n n C21 H21 OLC sing 374 n n C21 H21A OLC sing 375 n n C22 H22 OLC sing 376 n n O25 HO25 OLC sing 377 n n O23 HO23 OLC sing 378 n n # _atom_sites.entry_id 4UXX _atom_sites.fract_transf_matrix[1][1] 0.01371 _atom_sites.fract_transf_matrix[1][2] 0.007915 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015831 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005108 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CL A 1 1121 1121 CL CL . E 3 NA A 1 1122 1122 NA NA . F 4 ACT A 1 1123 1123 ACT ACT . G 5 OLC A 1 1124 1124 OLC OLC . H 5 OLC A 1 1125 1125 OLC OLC . I 4 ACT A 1 1126 1126 ACT ACT . J 6 MPD B 1 1122 1122 MPD MPD . K 5 OLC B 1 1123 1123 OLC OLC . L 5 OLC B 1 1124 1124 OLC OLC . M 4 ACT B 1 1125 1125 ACT ACT . N 3 NA B 1 1126 1126 NA NA . O 7 ZN C 1 1121 1121 ZN ZN . P 7 ZN C 1 1122 1122 ZN ZN . Q 8 ACP C 1 1123 1123 ACP ACP . R 5 OLC C 1 1124 1124 OLC OLC . S 5 OLC C 1 1125 1125 OLC OLC . T 3 NA C 1 1126 1126 NA NA . U 9 HOH A 1 2001 2001 HOH HOH . U 9 HOH A 2 2002 2002 HOH HOH . U 9 HOH A 3 2003 2003 HOH HOH . U 9 HOH A 4 2004 2004 HOH HOH . U 9 HOH A 5 2005 2005 HOH HOH . U 9 HOH A 6 2006 2006 HOH HOH . V 9 HOH B 1 2001 2001 HOH HOH . V 9 HOH B 2 2002 2002 HOH HOH . V 9 HOH B 3 2003 2003 HOH HOH . W 9 HOH C 1 2001 2001 HOH HOH . W 9 HOH C 2 2002 2002 HOH HOH . W 9 HOH C 3 2003 2003 HOH HOH . W 9 HOH C 4 2004 2004 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . G 5 59.922 -18.904 36.686 1 85.09 ? C18 OLC 1124 A 1 HETATM 2 C C10 OLC . . . G 5 59.324 -17.362 27.413 1 99.46 ? C10 OLC 1124 A 1 HETATM 3 C C9 OLC . . . G 5 59.591 -16.637 26.337 1 106.75 ? C9 OLC 1124 A 1 HETATM 4 C C17 OLC . . . G 5 60.773 -18.899 35.435 1 91.53 ? C17 OLC 1124 A 1 HETATM 5 C C11 OLC . . . G 5 58.983 -16.876 28.789 1 98.36 ? C11 OLC 1124 A 1 HETATM 6 C C8 OLC . . . G 5 59.618 -15.141 26.212 1 107.23 ? C8 OLC 1124 A 1 HETATM 7 C C24 OLC . . . G 5 65.247 -7.346 17.715 1 123.94 ? C24 OLC 1124 A 1 HETATM 8 C C16 OLC . . . G 5 60.297 -17.914 34.375 1 107.94 ? C16 OLC 1124 A 1 HETATM 9 C C12 OLC . . . G 5 60.045 -17.252 29.823 1 97.96 ? C12 OLC 1124 A 1 HETATM 10 C C7 OLC . . . G 5 60.193 -14.701 24.86 1 99.23 ? C7 OLC 1124 A 1 HETATM 11 C C15 OLC . . . G 5 61.188 -17.842 33.14 1 115.31 ? C15 OLC 1124 A 1 HETATM 12 C C13 OLC . . . G 5 59.657 -16.947 31.265 1 99.23 ? C13 OLC 1124 A 1 HETATM 13 C C6 OLC . . . G 5 59.953 -13.239 24.506 1 92.83 ? C6 OLC 1124 A 1 HETATM 14 C C14 OLC . . . G 5 60.848 -16.703 32.184 1 110.7 ? C14 OLC 1124 A 1 HETATM 15 C C5 OLC . . . G 5 60.238 -12.882 23.046 1 88.55 ? C5 OLC 1124 A 1 HETATM 16 C C4 OLC . . . G 5 61.709 -12.664 22.701 1 77.12 ? C4 OLC 1124 A 1 HETATM 17 C C3 OLC . . . G 5 61.959 -12.381 21.221 1 80.61 ? C3 OLC 1124 A 1 HETATM 18 C C2 OLC . . . G 5 63.41 -12.031 20.891 1 109.39 ? C2 OLC 1124 A 1 HETATM 19 C C21 OLC . . . G 5 64.26 -8.673 19.603 1 133.58 ? C21 OLC 1124 A 1 HETATM 20 C C1 OLC . . . G 5 63.704 -10.559 20.937 1 132.71 ? C1 OLC 1124 A 1 HETATM 21 C C22 OLC . . . G 5 65.462 -8.456 18.715 1 131.77 ? C22 OLC 1124 A 1 HETATM 22 O O19 OLC . . . G 5 63.598 -9.867 21.911 1 146.81 ? O19 OLC 1124 A 1 HETATM 23 O O25 OLC . . . G 5 66.434 -7.099 16.972 1 120.07 ? O25 OLC 1124 A 1 HETATM 24 O O23 OLC . . . G 5 66.59 -8.142 19.536 1 141.88 ? O23 OLC 1124 A 1 HETATM 25 O O20 OLC . . . G 5 64.095 -10.104 19.742 1 133.23 ? O20 OLC 1124 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #