data_4UYN # _model_server_result.job_id fZw9zwx26xWjum16RJ8TDw _model_server_result.datetime_utc '2024-11-14 13:33:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uyn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1392}' # _entry.id 4UYN # _exptl.entry_id 4UYN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 474.532 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl (9S)-9-[5-(1H-benzimidazol-2-ylsulfanyl)furan-2-yl]-8-hydroxy-5,6,7,9-tetrahydro-2H-pyrrolo[3,4-b]quinoline-3-carboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.82 _cell.angle_gamma 90 _cell.entry_id 4UYN _cell.length_a 48.355 _cell.length_b 45.913 _cell.length_c 59.595 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UYN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H22 N4 O4 S' _chem_comp.formula_weight 474.532 _chem_comp.id Y3M _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl (9S)-9-[5-(1H-benzimidazol-2-ylsulfanyl)furan-2-yl]-8-hydroxy-5,6,7,9-tetrahydro-2H-pyrrolo[3,4-b]quinoline-3-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O17 C16 Y3M doub 376 n n C16 O18 Y3M sing 377 n n C16 C7 Y3M sing 378 n n O18 C19 Y3M sing 379 n n C19 C20 Y3M sing 380 n n C7 C3 Y3M doub 381 n y C7 N6 Y3M sing 382 n y C3 C4 Y3M sing 383 n y C3 N1 Y3M sing 384 n n N6 C5 Y3M sing 385 n y C5 C4 Y3M doub 386 n y C4 C2 Y3M sing 387 n n C2 C8 Y3M sing 388 n n C2 C15 Y3M sing 389 n n C8 C13 Y3M doub 390 n n C8 C9 Y3M sing 391 n n C13 O14 Y3M sing 392 n n C13 C12 Y3M sing 393 n n C12 C11 Y3M sing 394 n n C11 C10 Y3M sing 395 n n C10 C9 Y3M sing 396 n n C9 N1 Y3M doub 397 n n C15 O24 Y3M sing 398 n y C15 C21 Y3M doub 399 n y O24 C23 Y3M sing 400 n y C23 C22 Y3M doub 401 n y C23 S25 Y3M sing 402 n n C22 C21 Y3M sing 403 n y S25 C26 Y3M sing 404 n n C26 N28 Y3M doub 405 n y C26 N27 Y3M sing 406 n y N28 C29 Y3M sing 407 n y C29 C34 Y3M sing 408 n y C29 C30 Y3M doub 409 n y C34 C33 Y3M doub 410 n y C33 C32 Y3M sing 411 n y C32 C31 Y3M doub 412 n y C31 C30 Y3M sing 413 n y C30 N27 Y3M sing 414 n y C19 H191 Y3M sing 415 n n C19 H192 Y3M sing 416 n n C20 H201 Y3M sing 417 n n C20 H202 Y3M sing 418 n n C20 H203 Y3M sing 419 n n N6 H6 Y3M sing 420 n n C5 H5 Y3M sing 421 n n C2 H2 Y3M sing 422 n n O14 H14 Y3M sing 423 n n C12 H121 Y3M sing 424 n n C12 H122 Y3M sing 425 n n C11 H111 Y3M sing 426 n n C11 H112 Y3M sing 427 n n C10 H101 Y3M sing 428 n n C10 H102 Y3M sing 429 n n C21 H21 Y3M sing 430 n n C22 H22 Y3M sing 431 n n N27 H27 Y3M sing 432 n n C34 H34 Y3M sing 433 n n C33 H33 Y3M sing 434 n n C32 H32 Y3M sing 435 n n C31 H31 Y3M sing 436 n n # _atom_sites.entry_id 4UYN _atom_sites.fract_transf_matrix[1][1] 0.02068 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00284 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02178 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Y3M A 1 1392 1392 Y3M Y3M . C 3 HOH A 1 2001 2001 HOH HOH . C 3 HOH A 2 2002 2002 HOH HOH . C 3 HOH A 3 2003 2003 HOH HOH . C 3 HOH A 4 2004 2004 HOH HOH . C 3 HOH A 5 2005 2005 HOH HOH . C 3 HOH A 6 2006 2006 HOH HOH . C 3 HOH A 7 2007 2007 HOH HOH . C 3 HOH A 8 2008 2008 HOH HOH . C 3 HOH A 9 2009 2009 HOH HOH . C 3 HOH A 10 2010 2010 HOH HOH . C 3 HOH A 11 2011 2011 HOH HOH . C 3 HOH A 12 2012 2012 HOH HOH . C 3 HOH A 13 2013 2013 HOH HOH . C 3 HOH A 14 2014 2014 HOH HOH . C 3 HOH A 15 2015 2015 HOH HOH . C 3 HOH A 16 2016 2016 HOH HOH . C 3 HOH A 17 2017 2017 HOH HOH . C 3 HOH A 18 2018 2018 HOH HOH . C 3 HOH A 19 2019 2019 HOH HOH . C 3 HOH A 20 2020 2020 HOH HOH . C 3 HOH A 21 2021 2021 HOH HOH . C 3 HOH A 22 2022 2022 HOH HOH . C 3 HOH A 23 2023 2023 HOH HOH . C 3 HOH A 24 2024 2024 HOH HOH . C 3 HOH A 25 2025 2025 HOH HOH . C 3 HOH A 26 2026 2026 HOH HOH . C 3 HOH A 27 2027 2027 HOH HOH . C 3 HOH A 28 2028 2028 HOH HOH . C 3 HOH A 29 2029 2029 HOH HOH . C 3 HOH A 30 2030 2030 HOH HOH . C 3 HOH A 31 2031 2031 HOH HOH . C 3 HOH A 32 2032 2032 HOH HOH . C 3 HOH A 33 2033 2033 HOH HOH . C 3 HOH A 34 2034 2034 HOH HOH . C 3 HOH A 35 2035 2035 HOH HOH . C 3 HOH A 36 2036 2036 HOH HOH . C 3 HOH A 37 2037 2037 HOH HOH . C 3 HOH A 38 2038 2038 HOH HOH . C 3 HOH A 39 2039 2039 HOH HOH . C 3 HOH A 40 2040 2040 HOH HOH . C 3 HOH A 41 2041 2041 HOH HOH . C 3 HOH A 42 2042 2042 HOH HOH . C 3 HOH A 43 2043 2043 HOH HOH . C 3 HOH A 44 2044 2044 HOH HOH . C 3 HOH A 45 2045 2045 HOH HOH . C 3 HOH A 46 2046 2046 HOH HOH . C 3 HOH A 47 2047 2047 HOH HOH . C 3 HOH A 48 2048 2048 HOH HOH . C 3 HOH A 49 2049 2049 HOH HOH . C 3 HOH A 50 2050 2050 HOH HOH . C 3 HOH A 51 2051 2051 HOH HOH . C 3 HOH A 52 2052 2052 HOH HOH . C 3 HOH A 53 2053 2053 HOH HOH . C 3 HOH A 54 2054 2054 HOH HOH . C 3 HOH A 55 2055 2055 HOH HOH . C 3 HOH A 56 2056 2056 HOH HOH . C 3 HOH A 57 2057 2057 HOH HOH . C 3 HOH A 58 2058 2058 HOH HOH . C 3 HOH A 59 2059 2059 HOH HOH . C 3 HOH A 60 2060 2060 HOH HOH . C 3 HOH A 61 2061 2061 HOH HOH . C 3 HOH A 62 2062 2062 HOH HOH . C 3 HOH A 63 2063 2063 HOH HOH . C 3 HOH A 64 2064 2064 HOH HOH . C 3 HOH A 65 2065 2065 HOH HOH . C 3 HOH A 66 2066 2066 HOH HOH . C 3 HOH A 67 2067 2067 HOH HOH . C 3 HOH A 68 2068 2068 HOH HOH . C 3 HOH A 69 2069 2069 HOH HOH . C 3 HOH A 70 2070 2070 HOH HOH . C 3 HOH A 71 2071 2071 HOH HOH . C 3 HOH A 72 2072 2072 HOH HOH . C 3 HOH A 73 2073 2073 HOH HOH . C 3 HOH A 74 2074 2074 HOH HOH . C 3 HOH A 75 2075 2075 HOH HOH . C 3 HOH A 76 2076 2076 HOH HOH . C 3 HOH A 77 2077 2077 HOH HOH . C 3 HOH A 78 2078 2078 HOH HOH . C 3 HOH A 79 2079 2079 HOH HOH . C 3 HOH A 80 2080 2080 HOH HOH . C 3 HOH A 81 2081 2081 HOH HOH . C 3 HOH A 82 2082 2082 HOH HOH . C 3 HOH A 83 2083 2083 HOH HOH . C 3 HOH A 84 2084 2084 HOH HOH . C 3 HOH A 85 2085 2085 HOH HOH . C 3 HOH A 86 2086 2086 HOH HOH . C 3 HOH A 87 2087 2087 HOH HOH . C 3 HOH A 88 2088 2088 HOH HOH . C 3 HOH A 89 2089 2089 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O17 Y3M . . . B 2 25.411 -9.661 10.671 1 15.1 ? O17 Y3M 1392 A 1 HETATM 2 C C16 Y3M . . . B 2 25.958 -8.584 10.856 1 17.99 ? C16 Y3M 1392 A 1 HETATM 3 O O18 Y3M . . . B 2 26.417 -7.83 9.7 1 23.13 ? O18 Y3M 1392 A 1 HETATM 4 C C19 Y3M . . . B 2 26.207 -8.337 8.384 1 27.18 ? C19 Y3M 1392 A 1 HETATM 5 C C20 Y3M . . . B 2 24.928 -7.755 7.817 1 31.96 ? C20 Y3M 1392 A 1 HETATM 6 C C7 Y3M . . . B 2 26.173 -8.029 12.229 1 16.73 ? C7 Y3M 1392 A 1 HETATM 7 C C3 Y3M . . . B 2 26.862 -6.712 12.382 1 16.88 ? C3 Y3M 1392 A 1 HETATM 8 N N6 Y3M . . . B 2 25.838 -8.532 13.448 1 17.98 ? N6 Y3M 1392 A 1 HETATM 9 C C5 Y3M . . . B 2 26.25 -7.675 14.432 1 18.46 ? C5 Y3M 1392 A 1 HETATM 10 C C4 Y3M . . . B 2 26.889 -6.56 13.825 1 17.5 ? C4 Y3M 1392 A 1 HETATM 11 C C2 Y3M . . . B 2 27.495 -5.425 14.497 1 21.43 ? C2 Y3M 1392 A 1 HETATM 12 C C8 Y3M . . . B 2 28.063 -4.479 13.524 1 23.11 ? C8 Y3M 1392 A 1 HETATM 13 C C13 Y3M . . . B 2 28.741 -3.248 14.053 1 27.47 ? C13 Y3M 1392 A 1 HETATM 14 O O14 Y3M . . . B 2 28.794 -3.05 15.256 1 30.08 ? O14 Y3M 1392 A 1 HETATM 15 C C12 Y3M . . . B 2 29.33 -2.258 13.09 1 26.66 ? C12 Y3M 1392 A 1 HETATM 16 C C11 Y3M . . . B 2 29.756 -2.951 11.794 1 26.91 ? C11 Y3M 1392 A 1 HETATM 17 C C10 Y3M . . . B 2 28.579 -3.674 11.107 1 25.28 ? C10 Y3M 1392 A 1 HETATM 18 C C9 Y3M . . . B 2 27.978 -4.706 12.046 1 22.24 ? C9 Y3M 1392 A 1 HETATM 19 N N1 Y3M . . . B 2 27.388 -5.808 11.534 1 20.54 ? N1 Y3M 1392 A 1 HETATM 20 C C15 Y3M . . . B 2 26.444 -4.821 15.334 1 24.64 ? C15 Y3M 1392 A 1 HETATM 21 O O24 Y3M . . . B 2 26.071 -5.419 16.491 1 24.51 ? O24 Y3M 1392 A 1 HETATM 22 C C23 Y3M . . . B 2 25.066 -4.613 16.884 1 26.07 ? C23 Y3M 1392 A 1 HETATM 23 C C22 Y3M . . . B 2 24.814 -3.523 16.044 1 25.98 ? C22 Y3M 1392 A 1 HETATM 24 C C21 Y3M . . . B 2 25.734 -3.667 15.007 1 25.11 ? C21 Y3M 1392 A 1 HETATM 25 S S25 Y3M . . . B 2 24.207 -5.009 18.347 1 26.25 ? S25 Y3M 1392 A 1 HETATM 26 C C26 Y3M . . . B 2 25.049 -4.476 19.774 1 22.18 ? C26 Y3M 1392 A 1 HETATM 27 N N28 Y3M . . . B 2 24.662 -4.749 21.021 1 22.84 ? N28 Y3M 1392 A 1 HETATM 28 C C29 Y3M . . . B 2 25.566 -4.087 21.778 1 23.66 ? C29 Y3M 1392 A 1 HETATM 29 C C34 Y3M . . . B 2 25.693 -3.947 23.153 1 27.26 ? C34 Y3M 1392 A 1 HETATM 30 C C33 Y3M . . . B 2 26.715 -3.153 23.669 1 27.82 ? C33 Y3M 1392 A 1 HETATM 31 C C32 Y3M . . . B 2 27.621 -2.516 22.822 1 26.15 ? C32 Y3M 1392 A 1 HETATM 32 C C31 Y3M . . . B 2 27.518 -2.672 21.451 1 24.63 ? C31 Y3M 1392 A 1 HETATM 33 C C30 Y3M . . . B 2 26.481 -3.446 20.928 1 22.81 ? C30 Y3M 1392 A 1 HETATM 34 N N27 Y3M . . . B 2 26.136 -3.711 19.659 1 21.5 ? N27 Y3M 1392 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 34 #