data_4UYO # _model_server_result.job_id '_H16opWp6qk2_DrAS8kgIg' _model_server_result.datetime_utc '2024-11-05 21:13:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4uyo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":1126}' # _entry.id 4UYO # _exptl.entry_id 4UYO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4UYO _cell.length_a 75.3 _cell.length_b 91.8 _cell.length_c 141.7 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UYO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,R,S,T 1 1 D,E,F,L,M,N,O,P,Q,U,V,W 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D OE1 GLU 37 D GLU 28 1_555 L ZN ZN . D ZN 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 D OE2 GLU 37 D GLU 28 1_555 L ZN ZN . D ZN 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc3 D OE1 GLU 85 D GLU 76 1_555 L ZN ZN . D ZN 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc4 D OE2 GLU 85 D GLU 76 1_555 L ZN ZN . D ZN 1122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc5 L ZN ZN . D ZN 1122 1_555 P OA2 FLC . D FLC 1126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc6 L ZN ZN . D ZN 1122 1_555 U O HOH . D HOH 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CA FLC sing 199 n n CAC OA1 FLC doub 200 n n CAC OA2 FLC sing 201 n n CA CB FLC sing 202 n n CA HA1 FLC sing 203 n n CA HA2 FLC sing 204 n n CB CBC FLC sing 205 n n CB CG FLC sing 206 n n CB OHB FLC sing 207 n n CBC OB1 FLC doub 208 n n CBC OB2 FLC sing 209 n n CG CGC FLC sing 210 n n CG HG1 FLC sing 211 n n CG HG2 FLC sing 212 n n CGC OG1 FLC doub 213 n n CGC OG2 FLC sing 214 n n OHB HOB FLC sing 215 n n # _atom_sites.entry_id 4UYO _atom_sites.fract_transf_matrix[1][1] 0.01328 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010893 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007057 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 79N A 1 1122 1122 79N 79N . H 3 79M B 1 1122 1122 79M 79M . I 2 79N B 1 1123 1123 79N 79N . J 3 79M B 1 1124 1124 79M 79M . K 2 79N C 1 1122 1122 79N 79N . L 4 ZN D 1 1122 1122 ZN ZN . M 2 79N D 1 1123 1123 79N 79N . N 2 79N D 1 1124 1124 79N 79N . O 3 79M D 1 1125 1125 79M 79M . P 5 FLC D 1 1126 1126 FLC FLC . Q 3 79M F 1 1121 1121 79M 79M . R 6 HOH A 1 2001 2001 HOH HOH . R 6 HOH A 2 2002 2002 HOH HOH . R 6 HOH A 3 2003 2003 HOH HOH . R 6 HOH A 4 2004 2004 HOH HOH . R 6 HOH A 5 2005 2005 HOH HOH . R 6 HOH A 6 2006 2006 HOH HOH . R 6 HOH A 7 2007 2007 HOH HOH . R 6 HOH A 8 2008 2008 HOH HOH . R 6 HOH A 9 2009 2009 HOH HOH . R 6 HOH A 10 2010 2010 HOH HOH . R 6 HOH A 11 2011 2011 HOH HOH . R 6 HOH A 12 2012 2012 HOH HOH . R 6 HOH A 13 2013 2013 HOH HOH . R 6 HOH A 14 2014 2014 HOH HOH . R 6 HOH A 15 2015 2015 HOH HOH . R 6 HOH A 16 2016 2016 HOH HOH . S 6 HOH B 1 2001 2001 HOH HOH . S 6 HOH B 2 2002 2002 HOH HOH . S 6 HOH B 3 2003 2003 HOH HOH . S 6 HOH B 4 2004 2004 HOH HOH . S 6 HOH B 5 2005 2005 HOH HOH . S 6 HOH B 6 2006 2006 HOH HOH . S 6 HOH B 7 2007 2007 HOH HOH . S 6 HOH B 8 2008 2008 HOH HOH . S 6 HOH B 9 2009 2009 HOH HOH . S 6 HOH B 10 2010 2010 HOH HOH . T 6 HOH C 1 2001 2001 HOH HOH . T 6 HOH C 2 2002 2002 HOH HOH . T 6 HOH C 3 2003 2003 HOH HOH . T 6 HOH C 4 2004 2004 HOH HOH . T 6 HOH C 5 2005 2005 HOH HOH . U 6 HOH D 1 2001 2001 HOH HOH . U 6 HOH D 2 2002 2002 HOH HOH . U 6 HOH D 3 2003 2003 HOH HOH . U 6 HOH D 4 2004 2004 HOH HOH . U 6 HOH D 5 2005 2005 HOH HOH . U 6 HOH D 6 2006 2006 HOH HOH . U 6 HOH D 7 2007 2007 HOH HOH . U 6 HOH D 8 2008 2008 HOH HOH . U 6 HOH D 9 2009 2009 HOH HOH . U 6 HOH D 10 2010 2010 HOH HOH . U 6 HOH D 11 2011 2011 HOH HOH . U 6 HOH D 12 2012 2012 HOH HOH . U 6 HOH D 13 2013 2013 HOH HOH . U 6 HOH D 14 2014 2014 HOH HOH . U 6 HOH D 15 2015 2015 HOH HOH . U 6 HOH D 16 2016 2016 HOH HOH . U 6 HOH D 17 2017 2017 HOH HOH . U 6 HOH D 18 2018 2018 HOH HOH . U 6 HOH D 19 2019 2019 HOH HOH . U 6 HOH D 20 2020 2020 HOH HOH . U 6 HOH D 21 2021 2021 HOH HOH . U 6 HOH D 22 2022 2022 HOH HOH . U 6 HOH D 23 2023 2023 HOH HOH . U 6 HOH D 24 2024 2024 HOH HOH . U 6 HOH D 25 2025 2025 HOH HOH . U 6 HOH D 26 2026 2026 HOH HOH . U 6 HOH D 27 2027 2027 HOH HOH . U 6 HOH D 28 2028 2028 HOH HOH . U 6 HOH D 29 2029 2029 HOH HOH . U 6 HOH D 30 2030 2030 HOH HOH . V 6 HOH E 1 2001 2001 HOH HOH . V 6 HOH E 2 2002 2002 HOH HOH . V 6 HOH E 3 2003 2003 HOH HOH . V 6 HOH E 4 2004 2004 HOH HOH . V 6 HOH E 5 2005 2005 HOH HOH . V 6 HOH E 6 2006 2006 HOH HOH . V 6 HOH E 7 2007 2007 HOH HOH . V 6 HOH E 8 2008 2008 HOH HOH . V 6 HOH E 9 2009 2009 HOH HOH . V 6 HOH E 10 2010 2010 HOH HOH . W 6 HOH F 1 2001 2001 HOH HOH . W 6 HOH F 2 2002 2002 HOH HOH . W 6 HOH F 3 2003 2003 HOH HOH . W 6 HOH F 4 2004 2004 HOH HOH . W 6 HOH F 5 2005 2005 HOH HOH . W 6 HOH F 6 2006 2006 HOH HOH . W 6 HOH F 7 2007 2007 HOH HOH . W 6 HOH F 8 2008 2008 HOH HOH . W 6 HOH F 9 2009 2009 HOH HOH . W 6 HOH F 10 2010 2010 HOH HOH . W 6 HOH F 11 2011 2011 HOH HOH . W 6 HOH F 12 2012 2012 HOH HOH . W 6 HOH F 13 2013 2013 HOH HOH . W 6 HOH F 14 2014 2014 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . P 5 -26.633 6.413 22.869 1 82.23 ? CAC FLC 1126 D 1 HETATM 2 C CA FLC . . . P 5 -25.672 7.549 22.954 1 94.33 ? CA FLC 1126 D 1 HETATM 3 C CB FLC . . . P 5 -24.595 7.462 23.988 1 117.78 ? CB FLC 1126 D 1 HETATM 4 C CBC FLC . . . P 5 -25.102 8.093 25.247 1 121.2 ? CBC FLC 1126 D 1 HETATM 5 C CG FLC . . . P 5 -23.396 8.227 23.516 1 111.27 ? CG FLC 1126 D 1 HETATM 6 C CGC FLC . . . P 5 -22.361 7.588 22.643 1 112.76 ? CGC FLC 1126 D 1 HETATM 7 O OA1 FLC . . . P 5 -27.729 6.439 23.495 1 104.09 ? OA1 FLC 1126 D 1 HETATM 8 O OA2 FLC . . . P 5 -26.335 5.414 22.17 1 78.4 ? OA2 FLC 1126 D 1 HETATM 9 O OB1 FLC . . . P 5 -24.297 8.621 26.066 1 127.1 ? OB1 FLC 1126 D 1 HETATM 10 O OB2 FLC . . . P 5 -26.341 8.103 25.487 1 120.29 ? OB2 FLC 1126 D 1 HETATM 11 O OG1 FLC . . . P 5 -22.666 6.787 21.715 1 107.77 ? OG1 FLC 1126 D 1 HETATM 12 O OG2 FLC . . . P 5 -21.152 7.87 22.837 1 129.09 ? OG2 FLC 1126 D 1 HETATM 13 O OHB FLC . . . P 5 -24.275 6.141 24.225 1 118.85 ? OHB FLC 1126 D 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #