data_4UYU
#
_model_server_result.job_id            hEa5Uz4SfaVH7xdJTatTEg 
_model_server_result.datetime_utc      '2024-11-25 17:16:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4uyu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":1452}' 
#
_entry.id    4UYU 
#
_exptl.entry_id    4UYU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4UYU 
_cell.length_a            74.22 
_cell.length_b            177.564 
_cell.length_c            60.991 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4UYU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,R 1 1 
B,J,K,L,M,N,O,P,Q,S 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf3 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf4 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
disulf ? disulf5 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf6 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf7 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf8 B SG CYS 24 B CYS 101 1_555 B SG CYS 106 B CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf9 B SG CYS 53 B CYS 130 1_555 B SG CYS 59 B CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf10 B SG CYS 202 B CYS 279 1_555 B SG CYS 208 B CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf11 B SG CYS 229 B CYS 306 1_555 B SG CYS 241 B CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
disulf ? disulf12 B SG CYS 309 B CYS 386 1_555 B SG CYS 372 B CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf13 B SG CYS 336 B CYS 413 1_555 B SG CYS 355 B CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf14 B SG CYS 363 B CYS 440 1_555 B SG CYS 368 B CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 C C1 NAG . A NAG 1452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? 
covale ? covale2 B ND2 ASN 19 B ASN 96 1_555 J C1 NAG . B NAG 1452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     4UYU 
_atom_sites.fract_transf_matrix[1][1]    0.013473 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005632 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016396 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAG A 1 1452 1452 NAG NAG . 
D 3 IOD A 1 1453 1453 IOD IOD . 
E 3 IOD A 1 1454 1454 IOD IOD . 
F 3 IOD A 1 1455 1455 IOD IOD . 
G 4 CL A 1 1456 1456 CL CL . 
H 3 IOD A 1 1457 1457 IOD IOD . 
I 3 IOD A 1 1458 1458 IOD IOD . 
J 2 NAG B 1 1452 1452 NAG NAG . 
K 3 IOD B 1 1453 1453 IOD IOD . 
L 3 IOD B 1 1454 1454 IOD IOD . 
M 3 IOD B 1 1455 1455 IOD IOD . 
N 3 IOD B 1 1456 1456 IOD IOD . 
O 3 IOD B 1 1457 1457 IOD IOD . 
P 3 IOD B 1 1458 1458 IOD IOD . 
Q 4 CL B 1 1459 1459 CL CL . 
R 5 HOH A 1 2001 2001 HOH HOH . 
R 5 HOH A 2 2002 2002 HOH HOH . 
R 5 HOH A 3 2003 2003 HOH HOH . 
R 5 HOH A 4 2004 2004 HOH HOH . 
R 5 HOH A 5 2005 2005 HOH HOH . 
R 5 HOH A 6 2006 2006 HOH HOH . 
R 5 HOH A 7 2007 2007 HOH HOH . 
R 5 HOH A 8 2008 2008 HOH HOH . 
R 5 HOH A 9 2009 2009 HOH HOH . 
R 5 HOH A 10 2010 2010 HOH HOH . 
R 5 HOH A 11 2011 2011 HOH HOH . 
R 5 HOH A 12 2012 2012 HOH HOH . 
R 5 HOH A 13 2013 2013 HOH HOH . 
R 5 HOH A 14 2014 2014 HOH HOH . 
R 5 HOH A 15 2015 2015 HOH HOH . 
R 5 HOH A 16 2016 2016 HOH HOH . 
R 5 HOH A 17 2017 2017 HOH HOH . 
R 5 HOH A 18 2018 2018 HOH HOH . 
R 5 HOH A 19 2019 2019 HOH HOH . 
R 5 HOH A 20 2020 2020 HOH HOH . 
R 5 HOH A 21 2021 2021 HOH HOH . 
R 5 HOH A 22 2022 2022 HOH HOH . 
R 5 HOH A 23 2023 2023 HOH HOH . 
R 5 HOH A 24 2024 2024 HOH HOH . 
R 5 HOH A 25 2025 2025 HOH HOH . 
R 5 HOH A 26 2026 2026 HOH HOH . 
R 5 HOH A 27 2027 2027 HOH HOH . 
R 5 HOH A 28 2028 2028 HOH HOH . 
R 5 HOH A 29 2029 2029 HOH HOH . 
R 5 HOH A 30 2030 2030 HOH HOH . 
R 5 HOH A 31 2031 2031 HOH HOH . 
R 5 HOH A 32 2032 2032 HOH HOH . 
R 5 HOH A 33 2033 2033 HOH HOH . 
R 5 HOH A 34 2034 2034 HOH HOH . 
R 5 HOH A 35 2035 2035 HOH HOH . 
R 5 HOH A 36 2036 2036 HOH HOH . 
R 5 HOH A 37 2037 2037 HOH HOH . 
R 5 HOH A 38 2038 2038 HOH HOH . 
R 5 HOH A 39 2039 2039 HOH HOH . 
R 5 HOH A 40 2040 2040 HOH HOH . 
R 5 HOH A 41 2041 2041 HOH HOH . 
R 5 HOH A 42 2042 2042 HOH HOH . 
S 5 HOH B 1 2001 2001 HOH HOH . 
S 5 HOH B 2 2002 2002 HOH HOH . 
S 5 HOH B 3 2003 2003 HOH HOH . 
S 5 HOH B 4 2004 2004 HOH HOH . 
S 5 HOH B 5 2005 2005 HOH HOH . 
S 5 HOH B 6 2006 2006 HOH HOH . 
S 5 HOH B 7 2007 2007 HOH HOH . 
S 5 HOH B 8 2008 2008 HOH HOH . 
S 5 HOH B 9 2009 2009 HOH HOH . 
S 5 HOH B 10 2010 2010 HOH HOH . 
S 5 HOH B 11 2011 2011 HOH HOH . 
S 5 HOH B 12 2012 2012 HOH HOH . 
S 5 HOH B 13 2013 2013 HOH HOH . 
S 5 HOH B 14 2014 2014 HOH HOH . 
S 5 HOH B 15 2015 2015 HOH HOH . 
S 5 HOH B 16 2016 2016 HOH HOH . 
S 5 HOH B 17 2017 2017 HOH HOH . 
S 5 HOH B 18 2018 2018 HOH HOH . 
S 5 HOH B 19 2019 2019 HOH HOH . 
S 5 HOH B 20 2020 2020 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . J 2 7.538 -31.654 -16.45 1 63.88 ? C1 NAG 1452 B 1 
HETATM 2 C C2 NAG . . . J 2 6.219 -32.322 -16.088 1 67.64 ? C2 NAG 1452 B 1 
HETATM 3 C C3 NAG . . . J 2 4.976 -31.573 -16.588 1 68.54 ? C3 NAG 1452 B 1 
HETATM 4 C C4 NAG . . . J 2 5.155 -30.052 -16.706 1 67.42 ? C4 NAG 1452 B 1 
HETATM 5 C C5 NAG . . . J 2 6.568 -29.62 -17.116 1 64.67 ? C5 NAG 1452 B 1 
HETATM 6 C C6 NAG . . . J 2 6.754 -28.113 -16.952 1 63.01 ? C6 NAG 1452 B 1 
HETATM 7 C C7 NAG . . . J 2 6.138 -34.781 -15.807 1 71.96 ? C7 NAG 1452 B 1 
HETATM 8 C C8 NAG . . . J 2 6.195 -36.108 -16.519 1 72.46 ? C8 NAG 1452 B 1 
HETATM 9 N N2 NAG . . . J 2 6.255 -33.693 -16.591 1 69.78 ? N2 NAG 1452 B 1 
HETATM 10 O O3 NAG . . . J 2 3.937 -31.815 -15.661 1 69.58 ? O3 NAG 1452 B 1 
HETATM 11 O O4 NAG . . . J 2 4.238 -29.525 -17.64 1 67.03 ? O4 NAG 1452 B 1 
HETATM 12 O O5 NAG . . . J 2 7.504 -30.258 -16.29 1 62.18 ? O5 NAG 1452 B 1 
HETATM 13 O O6 NAG . . . J 2 6.572 -27.764 -15.59 1 61.51 ? O6 NAG 1452 B 1 
HETATM 14 O O7 NAG . . . J 2 5.981 -34.751 -14.576 1 71.42 ? O7 NAG 1452 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           14 
#