data_4V2G # _model_server_result.job_id sb0LFOGQNg8oWMYZgCz5nQ _model_server_result.datetime_utc '2024-11-24 06:57:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4v2g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":222}' # _entry.id 4V2G # _exptl.entry_id 4V2G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 478.88 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-CHLOROTETRACYCLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4V2G _cell.length_a 69.249 _cell.length_b 69.249 _cell.length_c 182.373 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4V2G _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 F O HOH . A HOH 2014 1_555 E MG MG . B MG 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc2 F O HOH . A HOH 2015 1_555 E MG MG . B MG 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc3 B NE2 HIS 99 B HIS 100 1_555 E MG MG . B MG 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc4 D O11 CTC . B CTC 222 1_555 E MG MG . B MG 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc5 D O12 CTC . B CTC 222 1_555 E MG MG . B MG 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc6 E MG MG . B MG 223 1_555 G O HOH . B HOH 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? # _chem_comp.formula 'C22 H23 Cl N2 O8' _chem_comp.formula_weight 478.88 _chem_comp.id CTC _chem_comp.mon_nstd_flag . _chem_comp.name 7-CHLOROTETRACYCLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CTC doub 70 n n C1 C2 CTC sing 71 n n C1 C4B CTC sing 72 n n C2 C2' CTC sing 73 n n C2 C3 CTC doub 74 n n C2' O2' CTC doub 75 n n C2' N2' CTC sing 76 n n N2' HN21 CTC sing 77 n n N2' HN22 CTC sing 78 n n C3 O3 CTC sing 79 n n C3 C4 CTC sing 80 n n O3 HO3 CTC sing 81 n n C4 N4 CTC sing 82 n n C4 C4A CTC sing 83 n n C4 H4 CTC sing 84 n n N4 C4' CTC sing 85 n n N4 C4D CTC sing 86 n n C4' "H4'1" CTC sing 87 n n C4' "H4'2" CTC sing 88 n n C4' "H4'3" CTC sing 89 n n C4D H4A1 CTC sing 90 n n C4D H4A2 CTC sing 91 n n C4D H4A3 CTC sing 92 n n C4A C5 CTC sing 93 n n C4A C4B CTC sing 94 n n C4A H4A CTC sing 95 n n C5 C5A CTC sing 96 n n C5 H51 CTC sing 97 n n C5 H52 CTC sing 98 n n C5A C6 CTC sing 99 n n C5A C5B CTC sing 100 n n C5A H5A CTC sing 101 n n C6 O6 CTC sing 102 n n C6 C6' CTC sing 103 n n C6 C6A CTC sing 104 n n O6 HO6 CTC sing 105 n n C6' "H6'1" CTC sing 106 n n C6' "H6'2" CTC sing 107 n n C6' "H6'3" CTC sing 108 n n C6A C7 CTC doub 109 n y C6A C6B CTC sing 110 n y C7 CL7 CTC sing 111 n n C7 C8 CTC sing 112 n y C8 C9 CTC doub 113 n y C8 H8 CTC sing 114 n n C9 C10 CTC sing 115 n y C9 H9 CTC sing 116 n n C10 O10 CTC sing 117 n n C10 C6B CTC doub 118 n y O10 HO1 CTC sing 119 n n C6B C11 CTC sing 120 n n C11 O11 CTC doub 121 n n C11 C5B CTC sing 122 n n C5B C12 CTC doub 123 n n C12 O12 CTC sing 124 n n C12 C4B CTC sing 125 n n O12 HO2 CTC sing 126 n n C4B O4B CTC sing 127 n n O4B HO4 CTC sing 128 n n # _atom_sites.entry_id 4V2G _atom_sites.fract_transf_matrix[1][1] 0.014441 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014441 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005483 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ITC A 1 222 222 ITC ITC . D 3 CTC B 1 222 222 CTC CTC . E 4 MG B 1 223 223 MG MG . F 5 HOH A 1 2001 2001 HOH HOH . F 5 HOH A 2 2002 2002 HOH HOH . F 5 HOH A 3 2003 2003 HOH HOH . F 5 HOH A 4 2004 2004 HOH HOH . F 5 HOH A 5 2005 2005 HOH HOH . F 5 HOH A 6 2006 2006 HOH HOH . F 5 HOH A 7 2007 2007 HOH HOH . F 5 HOH A 8 2008 2008 HOH HOH . F 5 HOH A 9 2009 2009 HOH HOH . F 5 HOH A 10 2010 2010 HOH HOH . F 5 HOH A 11 2011 2011 HOH HOH . F 5 HOH A 12 2012 2012 HOH HOH . F 5 HOH A 13 2013 2013 HOH HOH . F 5 HOH A 14 2014 2014 HOH HOH . F 5 HOH A 15 2015 2015 HOH HOH . F 5 HOH A 16 2016 2016 HOH HOH . F 5 HOH A 17 2017 2017 HOH HOH . F 5 HOH A 18 2018 2018 HOH HOH . F 5 HOH A 19 2019 2019 HOH HOH . F 5 HOH A 20 2020 2020 HOH HOH . G 5 HOH B 1 2001 2001 HOH HOH . G 5 HOH B 2 2002 2002 HOH HOH . G 5 HOH B 3 2003 2003 HOH HOH . G 5 HOH B 4 2004 2004 HOH HOH . G 5 HOH B 5 2005 2005 HOH HOH . G 5 HOH B 6 2006 2006 HOH HOH . G 5 HOH B 7 2007 2007 HOH HOH . G 5 HOH B 8 2008 2008 HOH HOH . G 5 HOH B 9 2009 2009 HOH HOH . G 5 HOH B 10 2010 2010 HOH HOH . G 5 HOH B 11 2011 2011 HOH HOH . G 5 HOH B 12 2012 2012 HOH HOH . G 5 HOH B 13 2013 2013 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CTC . . . D 3 2.892 17.459 56.456 1 25.99 ? C1 CTC 222 B 1 HETATM 2 O O1 CTC . . . D 3 2.433 17.042 57.533 1 23.27 ? O1 CTC 222 B 1 HETATM 3 C C2 CTC . . . D 3 2.165 18.38 55.674 1 24.45 ? C2 CTC 222 B 1 HETATM 4 C C2' CTC . . . D 3 0.874 18.938 56.029 1 26.98 ? C2' CTC 222 B 1 HETATM 5 O O2' CTC . . . D 3 0.233 19.772 55.366 1 25.29 ? O2' CTC 222 B 1 HETATM 6 N N2' CTC . . . D 3 0.327 18.529 57.163 1 27.57 ? N2' CTC 222 B 1 HETATM 7 C C3 CTC . . . D 3 2.818 18.8 54.543 1 25.47 ? C3 CTC 222 B 1 HETATM 8 O O3 CTC . . . D 3 2.175 19.662 53.741 1 27.59 ? O3 CTC 222 B 1 HETATM 9 C C4 CTC . . . D 3 3.837 18.127 53.884 1 27.9 ? C4 CTC 222 B 1 HETATM 10 N N4 CTC . . . D 3 4.845 18.926 53.159 1 27.6 ? N4 CTC 222 B 1 HETATM 11 C C4' CTC . . . D 3 5.402 18.14 52.048 1 26.25 ? C4' CTC 222 B 1 HETATM 12 C C4D CTC . . . D 3 5.898 19.431 54.042 1 28.54 ? C4D CTC 222 B 1 HETATM 13 C C4A CTC . . . D 3 4.403 16.854 54.642 1 27.47 ? C4A CTC 222 B 1 HETATM 14 C C5 CTC . . . D 3 3.74 15.578 54.306 1 27.97 ? C5 CTC 222 B 1 HETATM 15 C C5A CTC . . . D 3 4.497 14.426 55.085 1 33.08 ? C5A CTC 222 B 1 HETATM 16 C C6 CTC . . . D 3 3.726 13.083 55.026 1 38.43 ? C6 CTC 222 B 1 HETATM 17 O O6 CTC . . . D 3 2.324 13.288 55.156 1 43.82 ? O6 CTC 222 B 1 HETATM 18 C C6' CTC . . . D 3 4.054 12.657 53.591 1 41.39 ? C6' CTC 222 B 1 HETATM 19 C C6A CTC . . . D 3 4.221 12.059 55.882 1 36.58 ? C6A CTC 222 B 1 HETATM 20 C C7 CTC . . . D 3 3.869 10.72 55.685 1 41.33 ? C7 CTC 222 B 1 HETATM 21 CL CL7 CTC . . . D 3 2.748 10.158 54.386 1 53.88 ? CL7 CTC 222 B 1 HETATM 22 C C8 CTC . . . D 3 4.381 9.693 56.454 1 43.66 ? C8 CTC 222 B 1 HETATM 23 C C9 CTC . . . D 3 5.261 9.961 57.471 1 42.59 ? C9 CTC 222 B 1 HETATM 24 C C10 CTC . . . D 3 5.604 11.272 57.674 1 40.52 ? C10 CTC 222 B 1 HETATM 25 O O10 CTC . . . D 3 6.453 11.509 58.69 1 42.75 ? O10 CTC 222 B 1 HETATM 26 C C6B CTC . . . D 3 5.159 12.352 56.855 1 37.61 ? C6B CTC 222 B 1 HETATM 27 C C11 CTC . . . D 3 5.374 13.706 57.161 1 33.43 ? C11 CTC 222 B 1 HETATM 28 O O11 CTC . . . D 3 5.545 13.984 58.351 1 31.73 ? O11 CTC 222 B 1 HETATM 29 C C5B CTC . . . D 3 4.829 14.73 56.392 1 30.65 ? C5B CTC 222 B 1 HETATM 30 C C12 CTC . . . D 3 4.8 16.051 56.83 1 27.62 ? C12 CTC 222 B 1 HETATM 31 O O12 CTC . . . D 3 5.135 16.348 58.12 1 25.19 ? O12 CTC 222 B 1 HETATM 32 C C4B CTC . . . D 3 4.252 17.096 56.081 1 28.12 ? C4B CTC 222 B 1 HETATM 33 O O4B CTC . . . D 3 5.012 18.282 56.447 1 28.71 ? O4B CTC 222 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #