data_4V9G # _model_server_result.job_id FXEDIdZRXztMpQopNcb1gg _model_server_result.datetime_utc '2024-12-27 03:42:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4v9g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"HE","auth_seq_id":307}' # _entry.id 4V9G # _exptl.entry_id 4V9G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.75 _cell.angle_gamma 90 _cell.entry_id 4V9G _cell.length_a 78.077 _cell.length_b 415.075 _cell.length_c 129.818 _cell.Z_PDB 56 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4V9G _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 64-meric _pdbx_struct_assembly.oligomeric_count 64 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC,RC,SC,TC,UC,VC,WC,XC,YC,ZC,AD,BD,CD,DD,ED,FD,GD,HD,ID,JD,KD,LD,MD,ND,OD,PD,QD,RD,SD,TD,UD,VD,WD,XD,YD,ZD,AE,BE,CE,DE,EE,FE,GE,HE,IE,JE _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 10 SC N N ? 10 HE N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 FA OE1 GLU 235 AM GLU 234 1_555 WC FE FE2 . AM FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc2 FA OE2 GLU 235 AM GLU 234 1_555 WC FE FE2 . AM FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? metalc ? metalc3 FA NE2 HIS 267 AM HIS 266 1_555 WC FE FE2 . AM FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc4 KB NE2 HIS 191 BL HIS 190 1_555 FE FE FE2 . BL FE2 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.71 ? metalc ? metalc5 KB NE2 HIS 231 BL HIS 230 1_555 FE FE FE2 . BL FE2 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc6 FE FE FE2 . BL FE2 305 1_555 LB NE2 HIS 220 BM HIS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 552 n n P O2 PO4 sing 553 n n P O3 PO4 sing 554 n n P O4 PO4 sing 555 n n # _atom_sites.entry_id 4V9G _atom_sites.fract_transf_matrix[1][1] 0.012808 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003612 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.002409 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008004 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code MB 7 BCL AT 1 101 17 BCL BCL . NB 7 BCL AT 1 102 18 BCL BCL . OB 7 BCL AV 1 101 19 BCL BCL . PB 7 BCL A3 1 101 27 BCL BCL . QB 7 BCL A7 1 101 31 BCL BCL . RB 7 BCL AD 1 101 1 BCL BCL . SB 7 BCL AD 1 102 2 BCL BCL . TB 7 BCL AF 1 101 3 BCL BCL . UB 7 BCL A1 1 101 5 BCL BCL . VB 7 BCL AJ 1 101 8 BCL BCL . WB 7 BCL A2 1 101 9 BCL BCL . XB 7 BCL AN 1 101 11 BCL BCL . YB 7 BCL AP 1 101 13 BCL BCL . ZB 7 BCL AP 1 102 14 BCL BCL . AC 7 BCL AZ 1 101 15 BCL BCL . BC 7 BCL AS 1 101 16 BCL BCL . CC 7 BCL A9 1 101 10 BCL BCL . DC 7 BCL AO 1 101 12 BCL BCL . EC 7 BCL A6 1 101 29 BCL BCL . FC 7 BCL A6 1 102 30 BCL BCL . GC 7 BCL AW 1 101 20 BCL BCL . HC 7 BCL AY 1 101 21 BCL BCL . IC 7 BCL AY 1 102 22 BCL BCL . JC 7 BCL A4 1 101 28 BCL BCL . KC 7 BCL A8 1 101 32 BCL BCL . LC 7 BCL AG 1 101 4 BCL BCL . MC 7 BCL AI 1 101 6 BCL BCL . NC 7 BCL AK 1 101 7 BCL BCL . OC 7 BCL AL 1 301 302 BCL BCL . PC 7 BCL AL 1 302 304 BCL BCL . QC 8 BPH AL 1 303 402 BPH BPH . RC 9 U10 AL 1 304 502 U10 U10 . SC 10 PO4 AL 1 305 800 PO4 PO4 . TC 7 BCL AM 1 401 301 BCL BCL . UC 7 BCL AM 1 402 303 BCL BCL . VC 8 BPH AM 1 403 401 BPH BPH . WC 11 FE2 AM 1 404 500 FE2 FE2 . XC 9 U10 AM 1 405 501 U10 U10 . YC 12 SPO AM 1 406 600 SPO SPO . ZC 7 BCL B5 1 101 29 BCL BCL . AD 7 BCL BT 1 101 17 BCL BCL . BD 7 BCL BV 1 101 19 BCL BCL . CD 7 BCL BV 1 102 20 BCL BCL . DD 7 BCL B3 1 101 27 BCL BCL . ED 7 BCL B7 1 101 31 BCL BCL . FD 7 BCL BD 1 101 1 BCL BCL . GD 7 BCL BD 1 102 2 BCL BCL . HD 7 BCL BF 1 101 3 BCL BCL . ID 7 BCL BF 1 102 4 BCL BCL . JD 7 BCL B1 1 101 5 BCL BCL . KD 7 BCL B2 1 101 9 BCL BCL . LD 7 BCL BP 1 101 13 BCL BCL . MD 7 BCL BP 1 102 14 BCL BCL . ND 7 BCL BZ 1 101 15 BCL BCL . OD 7 BCL BZ 1 102 16 BCL BCL . PD 7 BCL B9 1 101 10 BCL BCL . QD 7 BCL BO 1 101 11 BCL BCL . RD 7 BCL BO 1 102 12 BCL BCL . SD 7 BCL B6 1 101 30 BCL BCL . TD 7 BCL BU 1 101 18 BCL BCL . UD 7 BCL BY 1 101 21 BCL BCL . VD 7 BCL BY 1 102 22 BCL BCL . WD 7 BCL B4 1 101 28 BCL BCL . XD 7 BCL B8 1 101 32 BCL BCL . YD 7 BCL BI 1 101 6 BCL BCL . ZD 7 BCL BK 1 101 7 BCL BCL . AE 7 BCL BK 1 102 8 BCL BCL . BE 7 BCL BL 1 301 301 BCL BCL . CE 7 BCL BL 1 302 302 BCL BCL . DE 7 BCL BL 1 303 304 BCL BCL . EE 8 BPH BL 1 304 304 BPH BPH . FE 11 FE2 BL 1 305 500 FE2 FE2 . GE 9 U10 BL 1 306 502 U10 U10 . HE 10 PO4 BL 1 307 800 PO4 PO4 . IE 7 BCL BM 1 401 303 BCL BCL . JE 8 BPH BM 1 402 402 BPH BPH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . HE 10 -4.184 158.242 54.931 1 2 ? P PO4 307 BL 1 HETATM 2 O O1 PO4 . . . HE 10 -4.57 159.247 53.872 1 2 ? O1 PO4 307 BL 1 HETATM 3 O O2 PO4 . . . HE 10 -5.001 158.484 56.178 1 2 ? O2 PO4 307 BL 1 HETATM 4 O O3 PO4 . . . HE 10 -4.449 156.846 54.419 1 2 ? O3 PO4 307 BL 1 HETATM 5 O O4 PO4 . . . HE 10 -2.715 158.39 55.254 1 2 ? O4 PO4 307 BL 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 45 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #