data_4W4U # _model_server_result.job_id wLDnu8iZ1wsbE7691yItsA _model_server_result.datetime_utc '2024-10-20 20:42:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4w4u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":503}' # _entry.id 4W4U # _exptl.entry_id 4W4U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.84 _cell.angle_gamma 90 _cell.entry_id 4W4U _cell.length_a 80.739 _cell.length_b 67.273 _cell.length_c 137.145 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4W4U _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,M,N,O,V,W,X 1 1 E,F,G,H,P,Q,R,S,T,U,Y,Z,AA,BA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N ? 5 O N N ? 5 P N N ? 5 Q N N ? 5 R N N ? 5 S N N ? 5 T N N ? 5 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 9 A CYS 4 1_555 I ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc2 A ND1 HIS 11 A HIS 6 1_555 I ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc3 A SG CYS 51 A CYS 46 1_555 J ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc4 A SG CYS 54 A CYS 49 1_555 J ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc5 A SG CYS 65 A CYS 60 1_555 L ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc6 A SG CYS 68 A CYS 63 1_555 L ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc7 A SG CYS 73 A CYS 68 1_555 J ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc8 A ND1 HIS 78 A HIS 73 1_555 J ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc9 A NE2 HIS 82 A HIS 77 1_555 L ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc10 A ND1 HIS 88 A HIS 83 1_555 L ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc11 A SG CYS 101 A CYS 96 1_555 I ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc12 A SG CYS 104 A CYS 99 1_555 I ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc13 A NE2 HIS 175 A HIS 170 1_555 M ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc14 A SG CYS 179 A CYS 174 1_555 M ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc15 A SG CYS 187 A CYS 182 1_555 M ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc16 A SG CYS 190 A CYS 185 1_555 M ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc17 A ND1 HIS 255 A HIS 250 1_555 K ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc18 A SG CYS 276 A CYS 271 1_555 K ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc19 A SG CYS 278 A CYS 273 1_555 K ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc20 A ND1 HIS 281 A HIS 276 1_555 K ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc21 A SG CYS 294 A CYS 289 1_555 N ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc22 A SG CYS 297 A CYS 292 1_555 N ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc23 A SG CYS 341 A CYS 336 1_555 N ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc24 A SG CYS 344 A CYS 339 1_555 N ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc25 D SG CYS 78 E CYS 78 1_555 O ZN ZN . E ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc26 D SG CYS 81 E CYS 81 1_555 O ZN ZN . E ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc27 D NE2 HIS 93 E HIS 93 1_555 O ZN ZN . E ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc28 E SG CYS 9 D CYS 4 1_555 P ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc29 E ND1 HIS 11 D HIS 6 1_555 P ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc30 E SG CYS 51 D CYS 46 1_555 S ZN ZN . D ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc31 E SG CYS 54 D CYS 49 1_555 S ZN ZN . D ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc32 E SG CYS 65 D CYS 60 1_555 T ZN ZN . D ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc33 E SG CYS 68 D CYS 63 1_555 T ZN ZN . D ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc34 E SG CYS 73 D CYS 68 1_555 S ZN ZN . D ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc35 E ND1 HIS 78 D HIS 73 1_555 S ZN ZN . D ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc36 E NE2 HIS 82 D HIS 77 1_555 T ZN ZN . D ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc37 E ND1 HIS 88 D HIS 83 1_555 T ZN ZN . D ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc38 E SG CYS 101 D CYS 96 1_555 P ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc39 E SG CYS 104 D CYS 99 1_555 P ZN ZN . D ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc40 E NE2 HIS 175 D HIS 170 1_555 Q ZN ZN . D ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc41 E SG CYS 179 D CYS 174 1_555 Q ZN ZN . D ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc42 E SG CYS 187 D CYS 182 1_555 Q ZN ZN . D ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc43 E SG CYS 190 D CYS 185 1_555 Q ZN ZN . D ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc44 E ND1 HIS 255 D HIS 250 1_555 R ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc45 E SG CYS 276 D CYS 271 1_555 R ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc46 E SG CYS 278 D CYS 273 1_555 R ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc47 E ND1 HIS 281 D HIS 276 1_555 R ZN ZN . D ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc48 H SG CYS 78 H CYS 78 1_555 U ZN ZN . H ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc49 H SG CYS 81 H CYS 81 1_555 U ZN ZN . H ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc50 H NE2 HIS 93 H HIS 93 1_555 U ZN ZN . H ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc51 U ZN ZN . H ZN 101 1_555 BA O HOH . H HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4W4U _atom_sites.fract_transf_matrix[1][1] 0.012386 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003748 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014865 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007618 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 ZN A 1 501 472 ZN ZN . J 5 ZN A 1 502 473 ZN ZN . K 5 ZN A 1 503 476 ZN ZN . L 5 ZN A 1 504 474 ZN ZN . M 5 ZN A 1 505 475 ZN ZN . N 5 ZN A 1 506 477 ZN ZN . O 5 ZN E 1 101 97 ZN ZN . P 5 ZN D 1 501 472 ZN ZN . Q 5 ZN D 1 502 475 ZN ZN . R 5 ZN D 1 503 476 ZN ZN . S 5 ZN D 1 504 473 ZN ZN . T 5 ZN D 1 505 474 ZN ZN . U 5 ZN H 1 101 97 ZN ZN . V 6 HOH A 1 601 29 HOH HOH . V 6 HOH A 2 602 64 HOH HOH . V 6 HOH A 3 603 69 HOH HOH . V 6 HOH A 4 604 81 HOH HOH . V 6 HOH A 5 605 82 HOH HOH . V 6 HOH A 6 606 85 HOH HOH . V 6 HOH A 7 607 89 HOH HOH . V 6 HOH A 8 608 92 HOH HOH . W 6 HOH B 1 101 11 HOH HOH . W 6 HOH B 2 102 38 HOH HOH . W 6 HOH B 3 103 17 HOH HOH . W 6 HOH B 4 104 86 HOH HOH . W 6 HOH B 5 105 90 HOH HOH . X 6 HOH E 1 201 25 HOH HOH . X 6 HOH E 2 202 77 HOH HOH . X 6 HOH E 3 203 95 HOH HOH . Y 6 HOH D 1 601 43 HOH HOH . Y 6 HOH D 2 602 52 HOH HOH . Y 6 HOH D 3 603 37 HOH HOH . Y 6 HOH D 4 604 2 HOH HOH . Y 6 HOH D 5 605 7 HOH HOH . Y 6 HOH D 6 606 10 HOH HOH . Y 6 HOH D 7 607 14 HOH HOH . Y 6 HOH D 8 608 15 HOH HOH . Y 6 HOH D 9 609 18 HOH HOH . Y 6 HOH D 10 610 19 HOH HOH . Y 6 HOH D 11 611 35 HOH HOH . Y 6 HOH D 12 612 36 HOH HOH . Y 6 HOH D 13 613 42 HOH HOH . Y 6 HOH D 14 614 44 HOH HOH . Y 6 HOH D 15 615 46 HOH HOH . Y 6 HOH D 16 616 47 HOH HOH . Y 6 HOH D 17 617 51 HOH HOH . Y 6 HOH D 18 618 73 HOH HOH . Y 6 HOH D 19 619 79 HOH HOH . Y 6 HOH D 20 620 84 HOH HOH . Y 6 HOH D 21 621 87 HOH HOH . Y 6 HOH D 22 622 88 HOH HOH . Y 6 HOH D 23 623 93 HOH HOH . Y 6 HOH D 24 624 94 HOH HOH . Y 6 HOH D 25 625 96 HOH HOH . Z 6 HOH F 1 101 6 HOH HOH . Z 6 HOH F 2 102 41 HOH HOH . Z 6 HOH F 3 103 53 HOH HOH . Z 6 HOH F 4 104 83 HOH HOH . AA 6 HOH G 1 101 68 HOH HOH . AA 6 HOH G 2 102 75 HOH HOH . BA 6 HOH H 1 201 50 HOH HOH . BA 6 HOH H 2 202 4 HOH HOH . BA 6 HOH H 3 203 20 HOH HOH . BA 6 HOH H 4 204 24 HOH HOH . BA 6 HOH H 5 205 91 HOH HOH . BA 6 HOH H 6 206 97 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 5 _atom_site.Cartn_x -32.239 _atom_site.Cartn_y 74.645 _atom_site.Cartn_z -16.681 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 76.45 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 503 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #