data_4W53 # _model_server_result.job_id ifpcITMI7hpsVA1MRys9xg _model_server_result.datetime_utc '2024-10-13 04:19:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4w53 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 4W53 # _exptl.entry_id 4W53 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.138 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TOLUENE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4W53 _cell.length_a 60.34 _cell.length_b 60.34 _cell.length_c 96.97 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4W53 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H8' _chem_comp.formula_weight 92.138 _chem_comp.id MBN _chem_comp.mon_nstd_flag . _chem_comp.name TOLUENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 MBN sing 251 n n C H1 MBN sing 252 n n C H2A MBN sing 253 n n C H3A MBN sing 254 n n C1 C2 MBN doub 255 n y C1 C6 MBN sing 256 n y C2 C3 MBN sing 257 n y C2 H2 MBN sing 258 n n C3 C4 MBN doub 259 n y C3 H3 MBN sing 260 n n C4 C5 MBN sing 261 n y C4 H4 MBN sing 262 n n C5 C6 MBN doub 263 n y C5 H5 MBN sing 264 n n C6 H6 MBN sing 265 n n # _atom_sites.entry_id 4W53 _atom_sites.fract_transf_matrix[1][1] 0.016573 _atom_sites.fract_transf_matrix[1][2] 0.009568 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019137 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010312 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MBN A 1 200 200 MBN DRG . C 3 EPE A 1 201 201 EPE EPE . D 4 HOH A 1 301 99 HOH HOH . D 4 HOH A 2 302 60 HOH HOH . D 4 HOH A 3 303 2 HOH HOH . D 4 HOH A 4 304 44 HOH HOH . D 4 HOH A 5 305 94 HOH HOH . D 4 HOH A 6 306 1 HOH HOH . D 4 HOH A 7 307 39 HOH HOH . D 4 HOH A 8 308 37 HOH HOH . D 4 HOH A 9 309 58 HOH HOH . D 4 HOH A 10 310 22 HOH HOH . D 4 HOH A 11 311 48 HOH HOH . D 4 HOH A 12 312 41 HOH HOH . D 4 HOH A 13 313 66 HOH HOH . D 4 HOH A 14 314 38 HOH HOH . D 4 HOH A 15 315 15 HOH HOH . D 4 HOH A 16 316 29 HOH HOH . D 4 HOH A 17 317 73 HOH HOH . D 4 HOH A 18 318 67 HOH HOH . D 4 HOH A 19 319 91 HOH HOH . D 4 HOH A 20 320 69 HOH HOH . D 4 HOH A 21 321 40 HOH HOH . D 4 HOH A 22 322 77 HOH HOH . D 4 HOH A 23 323 106 HOH HOH . D 4 HOH A 24 324 4 HOH HOH . D 4 HOH A 25 325 18 HOH HOH . D 4 HOH A 26 326 56 HOH HOH . D 4 HOH A 27 327 97 HOH HOH . D 4 HOH A 28 328 68 HOH HOH . D 4 HOH A 29 329 17 HOH HOH . D 4 HOH A 30 330 130 HOH HOH . D 4 HOH A 31 331 89 HOH HOH . D 4 HOH A 32 332 6 HOH HOH . D 4 HOH A 33 333 23 HOH HOH . D 4 HOH A 34 334 83 HOH HOH . D 4 HOH A 35 335 136 HOH HOH . D 4 HOH A 36 336 100 HOH HOH . D 4 HOH A 37 337 28 HOH HOH . D 4 HOH A 38 338 88 HOH HOH . D 4 HOH A 39 339 35 HOH HOH . D 4 HOH A 40 340 126 HOH HOH . D 4 HOH A 41 341 5 HOH HOH . D 4 HOH A 42 342 36 HOH HOH . D 4 HOH A 43 343 111 HOH HOH . D 4 HOH A 44 344 31 HOH HOH . D 4 HOH A 45 345 129 HOH HOH . D 4 HOH A 46 346 26 HOH HOH . D 4 HOH A 47 347 45 HOH HOH . D 4 HOH A 48 348 46 HOH HOH . D 4 HOH A 49 349 7 HOH HOH . D 4 HOH A 50 350 90 HOH HOH . D 4 HOH A 51 351 47 HOH HOH . D 4 HOH A 52 352 135 HOH HOH . D 4 HOH A 53 353 131 HOH HOH . D 4 HOH A 54 354 3 HOH HOH . D 4 HOH A 55 355 105 HOH HOH . D 4 HOH A 56 356 13 HOH HOH . D 4 HOH A 57 357 139 HOH HOH . D 4 HOH A 58 358 137 HOH HOH . D 4 HOH A 59 359 14 HOH HOH . D 4 HOH A 60 360 70 HOH HOH . D 4 HOH A 61 361 95 HOH HOH . D 4 HOH A 62 362 27 HOH HOH . D 4 HOH A 63 363 81 HOH HOH . D 4 HOH A 64 364 138 HOH HOH . D 4 HOH A 65 365 142 HOH HOH . D 4 HOH A 66 366 96 HOH HOH . D 4 HOH A 67 367 8 HOH HOH . D 4 HOH A 68 368 9 HOH HOH . D 4 HOH A 69 369 10 HOH HOH . D 4 HOH A 70 370 11 HOH HOH . D 4 HOH A 71 371 12 HOH HOH . D 4 HOH A 72 372 16 HOH HOH . D 4 HOH A 73 373 19 HOH HOH . D 4 HOH A 74 374 20 HOH HOH . D 4 HOH A 75 375 21 HOH HOH . D 4 HOH A 76 376 24 HOH HOH . D 4 HOH A 77 377 25 HOH HOH . D 4 HOH A 78 378 30 HOH HOH . D 4 HOH A 79 379 32 HOH HOH . D 4 HOH A 80 380 33 HOH HOH . D 4 HOH A 81 381 34 HOH HOH . D 4 HOH A 82 382 42 HOH HOH . D 4 HOH A 83 383 43 HOH HOH . D 4 HOH A 84 384 49 HOH HOH . D 4 HOH A 85 385 50 HOH HOH . D 4 HOH A 86 386 51 HOH HOH . D 4 HOH A 87 387 52 HOH HOH . D 4 HOH A 88 388 53 HOH HOH . D 4 HOH A 89 389 54 HOH HOH . D 4 HOH A 90 390 55 HOH HOH . D 4 HOH A 91 391 57 HOH HOH . D 4 HOH A 92 392 59 HOH HOH . D 4 HOH A 93 393 61 HOH HOH . D 4 HOH A 94 394 62 HOH HOH . D 4 HOH A 95 395 63 HOH HOH . D 4 HOH A 96 396 64 HOH HOH . D 4 HOH A 97 397 65 HOH HOH . D 4 HOH A 98 398 71 HOH HOH . D 4 HOH A 99 399 72 HOH HOH . D 4 HOH A 100 400 74 HOH HOH . D 4 HOH A 101 401 75 HOH HOH . D 4 HOH A 102 402 76 HOH HOH . D 4 HOH A 103 403 78 HOH HOH . D 4 HOH A 104 404 79 HOH HOH . D 4 HOH A 105 405 80 HOH HOH . D 4 HOH A 106 406 82 HOH HOH . D 4 HOH A 107 407 84 HOH HOH . D 4 HOH A 108 408 85 HOH HOH . D 4 HOH A 109 409 86 HOH HOH . D 4 HOH A 110 410 87 HOH HOH . D 4 HOH A 111 411 92 HOH HOH . D 4 HOH A 112 412 93 HOH HOH . D 4 HOH A 113 413 98 HOH HOH . D 4 HOH A 114 414 101 HOH HOH . D 4 HOH A 115 415 102 HOH HOH . D 4 HOH A 116 416 103 HOH HOH . D 4 HOH A 117 417 104 HOH HOH . D 4 HOH A 118 418 107 HOH HOH . D 4 HOH A 119 419 108 HOH HOH . D 4 HOH A 120 420 109 HOH HOH . D 4 HOH A 121 421 110 HOH HOH . D 4 HOH A 122 422 112 HOH HOH . D 4 HOH A 123 423 113 HOH HOH . D 4 HOH A 124 424 114 HOH HOH . D 4 HOH A 125 425 115 HOH HOH . D 4 HOH A 126 426 116 HOH HOH . D 4 HOH A 127 427 117 HOH HOH . D 4 HOH A 128 428 118 HOH HOH . D 4 HOH A 129 429 119 HOH HOH . D 4 HOH A 130 430 120 HOH HOH . D 4 HOH A 131 431 121 HOH HOH . D 4 HOH A 132 432 122 HOH HOH . D 4 HOH A 133 433 123 HOH HOH . D 4 HOH A 134 434 124 HOH HOH . D 4 HOH A 135 435 125 HOH HOH . D 4 HOH A 136 436 127 HOH HOH . D 4 HOH A 137 437 128 HOH HOH . D 4 HOH A 138 438 132 HOH HOH . D 4 HOH A 139 439 133 HOH HOH . D 4 HOH A 140 440 134 HOH HOH . D 4 HOH A 141 441 140 HOH HOH . D 4 HOH A 142 442 141 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C MBN . . . B 2 -32.355 7.263 2.207 0.8 22.81 ? C MBN 200 A 1 HETATM 2 C C1 MBN . . . B 2 -33.181 6.606 3.301 0.8 17.3 ? C1 MBN 200 A 1 HETATM 3 C C2 MBN . . . B 2 -33.238 7.16 4.565 0.8 19.02 ? C2 MBN 200 A 1 HETATM 4 C C3 MBN . . . B 2 -33.992 6.571 5.57 0.8 15.62 ? C3 MBN 200 A 1 HETATM 5 C C4 MBN . . . B 2 -34.711 5.417 5.332 0.8 15.04 ? C4 MBN 200 A 1 HETATM 6 C C5 MBN . . . B 2 -34.638 4.878 4.06 0.8 14.97 ? C5 MBN 200 A 1 HETATM 7 C C6 MBN . . . B 2 -33.894 5.447 3.048 0.8 18.66 ? C6 MBN 200 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #