data_4W5C # _model_server_result.job_id bCZMvF-WuJ78iLRnjfeHxg _model_server_result.datetime_utc '2024-12-23 19:22:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4w5c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":302}' # _entry.id 4W5C # _exptl.entry_id 4W5C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 321.308 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(1H-benzimidazol-2-yl)-3-(4-fluorophenyl)-1H-pyrazole-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4W5C _cell.length_a 137.79 _cell.length_b 137.79 _cell.length_c 166.48 _cell.Z_PDB 40 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4W5C _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 PISA monomeric 1 software_defined_assembly 4 PISA monomeric 1 software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F,G,L 1 1 B,H,M 2 1 C,I,J,N 3 1 D,K,O 4 1 E,P 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 22 1_555 A SG CYS 64 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 57 A CYS 56 1_555 A SG CYS 102 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 156 A CYS 155 1_555 A SG CYS 204 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 B SG CYS 23 B CYS 22 1_555 B SG CYS 64 B CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf5 B SG CYS 57 B CYS 56 1_555 B SG CYS 102 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf6 B SG CYS 156 B CYS 155 1_555 B SG CYS 204 B CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf7 C SG CYS 23 C CYS 22 1_555 C SG CYS 64 C CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf8 C SG CYS 57 C CYS 56 1_555 C SG CYS 102 C CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf9 C SG CYS 156 C CYS 155 1_555 C SG CYS 204 C CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf10 D SG CYS 23 D CYS 22 1_555 D SG CYS 64 D CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf11 D SG CYS 57 D CYS 56 1_555 D SG CYS 102 D CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf12 D SG CYS 156 D CYS 155 1_555 D SG CYS 204 D CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf13 E SG CYS 23 E CYS 22 1_555 E SG CYS 64 E CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf14 E SG CYS 57 E CYS 56 1_555 E SG CYS 102 E CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf15 E SG CYS 156 E CYS 155 1_555 E SG CYS 204 E CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C17 H12 F N5 O' _chem_comp.formula_weight 321.308 _chem_comp.id 3H6 _chem_comp.mon_nstd_flag . _chem_comp.name N-(1H-benzimidazol-2-yl)-3-(4-fluorophenyl)-1H-pyrazole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 N15 3H6 sing 35 n y C14 C13 3H6 doub 36 n y O01 C02 3H6 doub 37 n n N15 N16 3H6 sing 38 n y C13 C02 3H6 sing 39 n n C13 C17 3H6 sing 40 n y C02 N03 3H6 sing 41 n n N16 C17 3H6 doub 42 n y C10 C09 3H6 doub 43 n y C10 C11 3H6 sing 44 n y N12 C11 3H6 sing 45 n y N12 C04 3H6 sing 46 n y C09 C08 3H6 sing 47 n y C11 C06 3H6 doub 48 n y C17 C18 3H6 sing 49 n n C04 N03 3H6 sing 50 n n C04 N05 3H6 doub 51 n y C08 C07 3H6 doub 52 n y C06 N05 3H6 sing 53 n y C06 C07 3H6 sing 54 n y C19 C18 3H6 doub 55 n y C19 C20 3H6 sing 56 n y C18 C24 3H6 sing 57 n y C20 C21 3H6 doub 58 n y C24 C23 3H6 doub 59 n y C21 C23 3H6 sing 60 n y C21 F22 3H6 sing 61 n n C14 H1 3H6 sing 62 n n C10 H2 3H6 sing 63 n n N12 H3 3H6 sing 64 n n N03 H4 3H6 sing 65 n n C07 H6 3H6 sing 66 n n C08 H7 3H6 sing 67 n n C09 H8 3H6 sing 68 n n N15 H9 3H6 sing 69 n n C19 H10 3H6 sing 70 n n C20 H11 3H6 sing 71 n n C23 H12 3H6 sing 72 n n C24 H13 3H6 sing 73 n n # _atom_sites.entry_id 4W5C _atom_sites.fract_transf_matrix[1][1] 0.007257 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007257 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006007 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 3H5 A 1 301 301 3H5 3H5 . G 3 3H6 A 1 302 302 3H6 3H6 . H 4 3H7 B 1 301 301 3H7 3H7 . I 4 3H7 C 1 301 301 3H7 3H7 . J 2 3H5 C 1 302 302 3H5 3H5 . K 4 3H7 D 1 301 301 3H7 3H7 . L 5 HOH A 1 401 401 HOH HOH . L 5 HOH A 2 402 404 HOH HOH . L 5 HOH A 3 403 405 HOH HOH . L 5 HOH A 4 404 403 HOH HOH . L 5 HOH A 5 405 406 HOH HOH . L 5 HOH A 6 406 402 HOH HOH . M 5 HOH B 1 401 402 HOH HOH . M 5 HOH B 2 402 401 HOH HOH . M 5 HOH B 3 403 404 HOH HOH . M 5 HOH B 4 404 403 HOH HOH . N 5 HOH C 1 401 401 HOH HOH . N 5 HOH C 2 402 402 HOH HOH . N 5 HOH C 3 403 403 HOH HOH . N 5 HOH C 4 404 404 HOH HOH . O 5 HOH D 1 401 401 HOH HOH . O 5 HOH D 2 402 402 HOH HOH . O 5 HOH D 3 403 404 HOH HOH . O 5 HOH D 4 404 403 HOH HOH . P 5 HOH E 1 301 302 HOH HOH . P 5 HOH E 2 302 301 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 3H6 . . . G 3 4.807 32.307 -20.117 0.8 132.08 ? C11 3H6 302 A 1 HETATM 2 C C13 3H6 . . . G 3 -0.858 30.944 -20.999 0.8 101.45 ? C13 3H6 302 A 1 HETATM 3 C C14 3H6 . . . G 3 -1.769 31.222 -22.039 0.8 109.32 ? C14 3H6 302 A 1 HETATM 4 C C17 3H6 . . . G 3 -1.524 30.081 -20.106 0.8 93.9 ? C17 3H6 302 A 1 HETATM 5 C C18 3H6 . . . G 3 -0.97 29.588 -18.981 0.8 89.16 ? C18 3H6 302 A 1 HETATM 6 C C10 3H6 . . . G 3 6.228 32.331 -20.446 0.8 147.07 ? C10 3H6 302 A 1 HETATM 7 N N12 3H6 . . . G 3 3.8 31.363 -20.288 0.8 118.29 ? N12 3H6 302 A 1 HETATM 8 O O01 3H6 . . . G 3 1.022 32.114 -21.863 0.8 161.32 ? O01 3H6 302 A 1 HETATM 9 C C02 3H6 . . . G 3 0.56 31.488 -20.897 0.8 120.12 ? C02 3H6 302 A 1 HETATM 10 N N03 3H6 . . . G 3 1.392 31.309 -19.746 0.8 86.91 ? N03 3H6 302 A 1 HETATM 11 C C04 3H6 . . . G 3 2.652 31.882 -19.779 0.8 108.47 ? C04 3H6 302 A 1 HETATM 12 N N05 3H6 . . . G 3 2.907 33.131 -19.306 0.8 114.15 ? N05 3H6 302 A 1 HETATM 13 C C06 3H6 . . . G 3 4.236 33.413 -19.5 0.8 125.94 ? C06 3H6 302 A 1 HETATM 14 C C07 3H6 . . . G 3 5.01 34.571 -19.188 0.8 133.35 ? C07 3H6 302 A 1 HETATM 15 C C08 3H6 . . . G 3 6.384 34.596 -19.505 0.8 146.99 ? C08 3H6 302 A 1 HETATM 16 C C09 3H6 . . . G 3 6.989 33.462 -20.138 0.8 153.56 ? C09 3H6 302 A 1 HETATM 17 N N15 3H6 . . . G 3 -2.942 30.549 -21.777 0.8 109.06 ? N15 3H6 302 A 1 HETATM 18 N N16 3H6 . . . G 3 -2.783 29.856 -20.589 0.8 111.93 ? N16 3H6 302 A 1 HETATM 19 C C19 3H6 . . . G 3 0.172 28.753 -19.084 0.8 71.32 ? C19 3H6 302 A 1 HETATM 20 C C20 3H6 . . . G 3 0.771 28.256 -17.903 0.8 83.13 ? C20 3H6 302 A 1 HETATM 21 C C21 3H6 . . . G 3 0.246 28.574 -16.666 0.8 92.17 ? C21 3H6 302 A 1 HETATM 22 F F22 3H6 . . . G 3 0.836 28.091 -15.558 0.8 86.07 ? F22 3H6 302 A 1 HETATM 23 C C23 3H6 . . . G 3 -0.874 29.39 -16.568 0.8 97.26 ? C23 3H6 302 A 1 HETATM 24 C C24 3H6 . . . G 3 -1.487 29.902 -17.764 0.8 106.09 ? C24 3H6 302 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #