data_4W5N # _model_server_result.job_id gtOSfoNF-1WMGzSGQZPwiw _model_server_result.datetime_utc '2024-10-12 13:26:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4w5n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":903}' # _entry.id 4W5N # _exptl.entry_id 4W5N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.111 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.93 _cell.angle_gamma 90 _cell.entry_id 4W5N _cell.length_a 63.117 _cell.length_b 108.87 _cell.length_c 68.071 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4W5N _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 597 A ASP 597 1_555 F MG MG . A MG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc2 A O VAL 598 A VAL 598 1_555 F MG MG . A MG 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.918 ? # _chem_comp.formula 'C6 H6 O' _chem_comp.formula_weight 94.111 _chem_comp.id IPH _chem_comp.mon_nstd_flag . _chem_comp.name PHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPH doub 288 n y C1 C6 IPH sing 289 n y C1 O1 IPH sing 290 n n C2 C3 IPH sing 291 n y C2 H2 IPH sing 292 n n C3 C4 IPH doub 293 n y C3 H3 IPH sing 294 n n C4 C5 IPH sing 295 n y C4 H4 IPH sing 296 n n C5 C6 IPH doub 297 n y C5 H5 IPH sing 298 n n C6 H6 IPH sing 299 n n O1 HO1 IPH sing 300 n n # _atom_sites.entry_id 4W5N _atom_sites.fract_transf_matrix[1][1] 0.015844 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004824 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009185 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015356 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 IPH A 1 901 1 IPH IPH . D 3 IPH A 1 902 2 IPH IPH . E 3 IPH A 1 903 3 IPH IPH . F 4 MG A 1 904 1 MG MG . G 5 HOH A 1 1001 13 HOH HOH . G 5 HOH A 2 1002 31 HOH HOH . G 5 HOH A 3 1003 130 HOH HOH . G 5 HOH A 4 1004 49 HOH HOH . G 5 HOH A 5 1005 2 HOH HOH . G 5 HOH A 6 1006 3 HOH HOH . G 5 HOH A 7 1007 5 HOH HOH . G 5 HOH A 8 1008 9 HOH HOH . G 5 HOH A 9 1009 11 HOH HOH . G 5 HOH A 10 1010 14 HOH HOH . G 5 HOH A 11 1011 28 HOH HOH . G 5 HOH A 12 1012 36 HOH HOH . G 5 HOH A 13 1013 37 HOH HOH . G 5 HOH A 14 1014 43 HOH HOH . G 5 HOH A 15 1015 44 HOH HOH . G 5 HOH A 16 1016 58 HOH HOH . G 5 HOH A 17 1017 60 HOH HOH . G 5 HOH A 18 1018 71 HOH HOH . G 5 HOH A 19 1019 156 HOH HOH . G 5 HOH A 20 1020 173 HOH HOH . G 5 HOH A 21 1021 176 HOH HOH . G 5 HOH A 22 1022 184 HOH HOH . G 5 HOH A 23 1023 191 HOH HOH . G 5 HOH A 24 1024 196 HOH HOH . G 5 HOH A 25 1025 231 HOH HOH . G 5 HOH A 26 1026 235 HOH HOH . G 5 HOH A 27 1027 244 HOH HOH . G 5 HOH A 28 1028 250 HOH HOH . G 5 HOH A 29 1029 268 HOH HOH . H 5 HOH B 1 101 217 HOH HOH . H 5 HOH B 2 102 232 HOH HOH . H 5 HOH B 3 103 171 HOH HOH . H 5 HOH B 4 104 17 HOH HOH . H 5 HOH B 5 105 195 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPH . . . E 3 -45.709 3.808 42.407 1 73.57 ? C1 IPH 903 A 1 HETATM 2 C C2 IPH . . . E 3 -46.203 2.511 42.478 1 75.51 ? C2 IPH 903 A 1 HETATM 3 C C3 IPH . . . E 3 -47.38 2.257 43.173 1 77.59 ? C3 IPH 903 A 1 HETATM 4 C C4 IPH . . . E 3 -48.059 3.298 43.795 1 75.21 ? C4 IPH 903 A 1 HETATM 5 C C5 IPH . . . E 3 -47.563 4.595 43.723 1 72.1 ? C5 IPH 903 A 1 HETATM 6 C C6 IPH . . . E 3 -46.387 4.85 43.028 1 72.55 ? C6 IPH 903 A 1 HETATM 7 O O1 IPH . . . E 3 -44.55 4.058 41.722 1 73.38 ? O1 IPH 903 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #